RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 SH3PXD2AQ5TCZ1 1133 aa8.98□□□□□ -0.97
CSDE1-212ENST00000529046 ANKMY2Q8IV38 441 aa8.98□□□□□ -0.97
CSDE1-212ENST00000529046 OXCT2Q9BYC2 517 aaPredicted RBP8.98□□□□□ -0.97
CSDE1-212ENST00000529046 ZMIZ1Q9ULJ6 1067 aa8.98□□□□□ -0.97
CSDE1-212ENST00000529046 PPP1R12BO60237 982 aaPredicted RBP8.97□□□□□ -0.97
CSDE1-212ENST00000529046 HIRAP54198 1017 aaPredicted RBP8.97□□□□□ -0.97
CSDE1-212ENST00000529046 KLRG1Q96E93 195 aa8.97□□□□□ -0.97
CSDE1-212ENST00000529046 GPC6Q9Y625 555 aaPredicted RBP8.97□□□□□ -0.97
CSDE1-212ENST00000529046 RNF225M0QZC1 329 aaPredicted RBP8.96□□□□□ -0.98
CSDE1-212ENST00000529046 KHNYNO15037 678 aaKnown RBP8.96□□□□□ -0.98
CSDE1-212ENST00000529046 FAM157BP0CG42 384 aa8.96□□□□□ -0.98
CSDE1-212ENST00000529046 MAPTP10636 758 aaKnown RBP8.96□□□□□ -0.98
CSDE1-212ENST00000529046 MARSP56192 900 aaKnown RBP8.96□□□□□ -0.98
CSDE1-212ENST00000529046 CTBSQ01459 385 aa8.96□□□□□ -0.98
CSDE1-212ENST00000529046 SAMD5Q5TGI4 173 aa8.96□□□□□ -0.98
CSDE1-212ENST00000529046 RHPN1Q8TCX5 695 aa8.96□□□□□ -0.98
CSDE1-212ENST00000529046 SCG3Q8WXD2 468 aaKnown RBP8.96□□□□□ -0.98
CSDE1-212ENST00000529046 HINFPQ9BQA5 517 aa8.96□□□□□ -0.98
CSDE1-212ENST00000529046 NEUROD4Q9HD90 331 aa8.96□□□□□ -0.98
CSDE1-212ENST00000529046 C21orf2O43822 256 aa8.95□□□□□ -0.98
CSDE1-212ENST00000529046 TNP2Q05952 138 aa8.95□□□□□ -0.98
CSDE1-212ENST00000529046 FAM69CQ0P6D2 419 aa8.95□□□□□ -0.98
CSDE1-212ENST00000529046 POTEAQ6S8J7 498 aa8.95□□□□□ -0.98
CSDE1-212ENST00000529046 LRRC69Q6ZNQ3 347 aa8.95□□□□□ -0.98
CSDE1-212ENST00000529046 GAS2L2Q8NHY3 880 aa8.95□□□□□ -0.98
CSDE1-212ENST00000529046 LRRC4BQ9NT99 713 aa8.95□□□□□ -0.98
CSDE1-212ENST00000529046 GDF2Q9UK05 429 aaPredicted RBP8.95□□□□□ -0.98
CSDE1-212ENST00000529046 HCN4Q9Y3Q4 1203 aa8.95□□□□□ -0.98
CSDE1-212ENST00000529046 ATAD2Q6PL18 1390 aa8.95□□□□□ -0.98
CSDE1-212ENST00000529046 TMEM88BA6NKF7 163 aa8.94□□□□□ -0.98
CSDE1-212ENST00000529046 C2CD2LO14523 706 aa8.94□□□□□ -0.98
CSDE1-212ENST00000529046 OIP5O43482 229 aa8.94□□□□□ -0.98
CSDE1-212ENST00000529046 C1orf53Q5VUE5 145 aa8.94□□□□□ -0.98
CSDE1-212ENST00000529046 GOLGA6L1Q8N7Z2 621 aa8.94□□□□□ -0.98
CSDE1-212ENST00000529046 NEDD1Q8NHV4 660 aa8.94□□□□□ -0.98
CSDE1-212ENST00000529046 PHACTR1Q9C0D0 580 aa8.94□□□□□ -0.98
CSDE1-212ENST00000529046 USTQ9Y2C2 406 aa8.94□□□□□ -0.98
CSDE1-212ENST00000529046 CD33P20138 364 aa8.93□□□□□ -0.98
CSDE1-212ENST00000529046 KCNMA1Q12791 1236 aa8.93□□□□□ -0.98
CSDE1-212ENST00000529046 CDCA8Q53HL2 280 aa8.93□□□□□ -0.98
CSDE1-212ENST00000529046 STAG2Q8N3U4 1231 aa8.93□□□□□ -0.98
CSDE1-212ENST00000529046 CHMP7Q8WUX9 453 aaPredicted RBP8.93□□□□□ -0.98
CSDE1-212ENST00000529046 NOVA2Q9UNW9 492 aaKnown RBP8.93□□□□□ -0.98
CSDE1-212ENST00000529046 ACIN1Q9UKV3 1341 aaKnown RBP8.92□□□□□ -0.98
CSDE1-212ENST00000529046 LGR5O75473 907 aa8.92□□□□□ -0.98
CSDE1-212ENST00000529046 FAM182BQ5T319 152 aa8.92□□□□□ -0.98
CSDE1-212ENST00000529046 C7orf43Q8WVR3 580 aa8.92□□□□□ -0.98
CSDE1-212ENST00000529046 SCARF2Q96GP6 870 aaPredicted RBP8.92□□□□□ -0.98
CSDE1-212ENST00000529046 C2orf49Q9BVC5 232 aaPredicted RBP8.92□□□□□ -0.98
CSDE1-212ENST00000529046 EFSO43281 561 aa8.91□□□□□ -0.98
CSDE1-212ENST00000529046 ARAFP10398 606 aa8.91□□□□□ -0.98
CSDE1-212ENST00000529046 LAMC2Q13753 1193 aa8.91□□□□□ -0.98
CSDE1-212ENST00000529046 RETREG2Q8NC44 543 aa8.91□□□□□ -0.98
CSDE1-212ENST00000529046 STK32AQ8WU08 396 aa8.91□□□□□ -0.98
CSDE1-212ENST00000529046 GGA1Q9UJY5 639 aa8.91□□□□□ -0.98
CSDE1-212ENST00000529046 HCN2Q9UL51 889 aa8.91□□□□□ -0.98
CSDE1-212ENST00000529046 IGFBP4P22692 258 aa8.9□□□□□ -0.98
CSDE1-212ENST00000529046 SWI5Q1ZZU3 235 aa8.9□□□□□ -0.98
CSDE1-212ENST00000529046 TMEM164Q5U3C3 297 aa8.9□□□□□ -0.98
CSDE1-212ENST00000529046 SLCO4C1Q6ZQN7 724 aa8.9□□□□□ -0.98
CSDE1-212ENST00000529046 ALDH16A1Q8IZ83 802 aa8.9□□□□□ -0.98
CSDE1-212ENST00000529046 GALNT6Q8NCL4 622 aa8.9□□□□□ -0.98
CSDE1-212ENST00000529046 FAM200AQ8TCP9 573 aa8.9□□□□□ -0.98
CSDE1-212ENST00000529046 NGLY1Q96IV0 654 aa8.9□□□□□ -0.98
CSDE1-212ENST00000529046 MARK1Q9P0L2 795 aa8.9□□□□□ -0.98
CSDE1-212ENST00000529046 ANKIB1Q9P2G1 1089 aa8.9□□□□□ -0.98
CSDE1-212ENST00000529046 C1orf229Q6ZS94 237 aaPredicted RBP8.89□□□□□ -0.99
CSDE1-212ENST00000529046 EDARADDQ8WWZ3 215 aa8.89□□□□□ -0.99
CSDE1-212ENST00000529046 HSH2DQ96JZ2 352 aa8.89□□□□□ -0.99
CSDE1-212ENST00000529046 STRN4Q9NRL3 753 aa8.89□□□□□ -0.99
CSDE1-212ENST00000529046 DNMT3AQ9Y6K1 912 aaPredicted RBP8.89□□□□□ -0.99
CSDE1-212ENST00000529046 SHISA8B8ZZ34 492 aa8.88□□□□□ -0.99
CSDE1-212ENST00000529046 GSK3AP49840 483 aa8.88□□□□□ -0.99
CSDE1-212ENST00000529046 PODNQ7Z5L7 613 aa8.88□□□□□ -0.99
CSDE1-212ENST00000529046 SUSD3Q96L08 255 aa8.88□□□□□ -0.99
CSDE1-212ENST00000529046 AVENQ9NQS1 362 aaPredicted RBP8.88□□□□□ -0.99
CSDE1-212ENST00000529046 PRR12Q9ULL5 1215 aa8.88□□□□□ -0.99
CSDE1-212ENST00000529046 NEURL1BA8MQ27 555 aa8.87□□□□□ -0.99
CSDE1-212ENST00000529046 ADH6P28332 368 aa8.87□□□□□ -0.99
CSDE1-212ENST00000529046 IRS1P35568 1242 aa8.87□□□□□ -0.99
CSDE1-212ENST00000529046 RASSF7Q02833 373 aa8.87□□□□□ -0.99
CSDE1-212ENST00000529046 HIF1AQ16665 826 aa8.87□□□□□ -0.99
CSDE1-212ENST00000529046 HOMEZQ8IX15 550 aa8.87□□□□□ -0.99
CSDE1-212ENST00000529046 CLP1Q92989 425 aaKnown RBP8.87□□□□□ -0.99
CSDE1-212ENST00000529046 TRAIPQ9BWF2 469 aa8.87□□□□□ -0.99
CSDE1-212ENST00000529046 SLAIN2Q9P270 581 aa8.87□□□□□ -0.99
CSDE1-212ENST00000529046 PHF20L1A8MW92 1017 aa8.86□□□□□ -0.99
CSDE1-212ENST00000529046 PDE4CQ08493 712 aa8.86□□□□□ -0.99
CSDE1-212ENST00000529046 ZNF468Q5VIY5 522 aaPredicted RBP8.86□□□□□ -0.99
CSDE1-212ENST00000529046 KANK3Q6NY19 840 aa8.86□□□□□ -0.99
CSDE1-212ENST00000529046 BEND7Q8N7W2 519 aaPredicted RBP8.86□□□□□ -0.99
CSDE1-212ENST00000529046 ZNF280CQ8ND82 737 aa8.86□□□□□ -0.99
CSDE1-212ENST00000529046 CEP63Q96MT8 703 aa8.86□□□□□ -0.99
CSDE1-212ENST00000529046 BRD7Q9NPI1 651 aa8.86□□□□□ -0.99
CSDE1-212ENST00000529046 CNTNAP5Q8WYK1 1306 aa8.85□□□□□ -0.99
CSDE1-212ENST00000529046 FOXO3O43524 673 aa8.85□□□□□ -0.99
CSDE1-212ENST00000529046 GDF11O95390 407 aa8.85□□□□□ -0.99
CSDE1-212ENST00000529046 EPXP11678 715 aa8.85□□□□□ -0.99
CSDE1-212ENST00000529046 AMPD1P23109 780 aa8.85□□□□□ -0.99
CSDE1-212ENST00000529046 WEE1P30291 646 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 538.7 ms