RNA–Protein interactions for RNA: ENST00000527339.1

LTBP3-208, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 3

Gene LTBP3, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-208ENST00000527339 SBF1O95248 1867 aa22.58■■□□□ 1.2
LTBP3-208ENST00000527339 USPL1Q5W0Q7 1092 aa22.57■■□□□ 1.2
LTBP3-208ENST00000527339 MBIPQ9NS73 344 aa22.57■■□□□ 1.2
LTBP3-208ENST00000527339 ZNF330Q9Y3S2 320 aaPredicted RBP22.57■■□□□ 1.2
LTBP3-208ENST00000527339 BCORQ6W2J9 1755 aa22.57■■□□□ 1.2
LTBP3-208ENST00000527339 PRELPP51888 382 aa22.56■■□□□ 1.2
LTBP3-208ENST00000527339 RNF181Q9P0P0 153 aa22.56■■□□□ 1.2
LTBP3-208ENST00000527339 PIP4K2AP48426 406 aaPredicted RBP22.55■■□□□ 1.2
LTBP3-208ENST00000527339 RBM46Q8TBY0 533 aaKnown RBP22.55■■□□□ 1.2
LTBP3-208ENST00000527339 IL16Q14005 1332 aa22.55■■□□□ 1.2
LTBP3-208ENST00000527339 ERBB4Q15303 1308 aa22.55■■□□□ 1.2
LTBP3-208ENST00000527339 AFDNP55196 1824 aaKnown RBP22.54■■□□□ 1.2
LTBP3-208ENST00000527339 WDR90Q96KV7 1748 aa22.54■■□□□ 1.2
LTBP3-208ENST00000527339 NBPF26B4DH59 902 aa22.54■■□□□ 1.2
LTBP3-208ENST00000527339 NBPF10Q6P3W6 841 aaKnown RBP22.54■■□□□ 1.2
LTBP3-208ENST00000527339 NBPF15Q8N660 670 aa22.54■■□□□ 1.2
LTBP3-208ENST00000527339 BCL2L12Q9HB09 334 aa22.54■■□□□ 1.2
LTBP3-208ENST00000527339 HOXB7P09629 217 aa22.53■■□□□ 1.2
LTBP3-208ENST00000527339 RASSF7Q02833 373 aa22.53■■□□□ 1.2
LTBP3-208ENST00000527339 NFIXQ14938 502 aa22.53■■□□□ 1.2
LTBP3-208ENST00000527339 MIER1Q8N108 512 aa22.53■■□□□ 1.2
LTBP3-208ENST00000527339 RRAGCQ9HB90 399 aa22.53■■□□□ 1.2
LTBP3-208ENST00000527339 KRT24Q2M2I5 525 aa22.52■■□□□ 1.2
LTBP3-208ENST00000527339 TBC1D2BQ9UPU7 963 aa22.52■■□□□ 1.2
LTBP3-208ENST00000527339 SALL2Q9Y467 1007 aaPredicted RBP22.52■■□□□ 1.2
LTBP3-208ENST00000527339 DZIP3Q86Y13 1208 aaKnown RBP22.51■■□□□ 1.19
LTBP3-208ENST00000527339 WDR63Q8IWG1 891 aa22.51■■□□□ 1.19
LTBP3-208ENST00000527339 EIF2S2P20042 333 aaKnown RBP22.5■■□□□ 1.19
LTBP3-208ENST00000527339 NRXN2Q9P2S2 1712 aa22.5■■□□□ 1.19
LTBP3-208ENST00000527339 CAMTA2O94983 1202 aa22.49■■□□□ 1.19
LTBP3-208ENST00000527339 CARMIL3Q8ND23 1372 aa22.49■■□□□ 1.19
LTBP3-208ENST00000527339 DUSP27Q5VZP5 1158 aa22.48■■□□□ 1.19
LTBP3-208ENST00000527339 MYL6BP14649 208 aa22.47■■□□□ 1.19
LTBP3-208ENST00000527339 KLRG1Q96E93 195 aa22.47■■□□□ 1.19
LTBP3-208ENST00000527339 KDM2BQ8NHM5 1336 aa22.47■■□□□ 1.19
LTBP3-208ENST00000527339 NUP98P52948 1817 aa22.47■■□□□ 1.19
LTBP3-208ENST00000527339 RGL2O15211 777 aa22.46■■□□□ 1.19
LTBP3-208ENST00000527339 FSTL1Q12841 308 aa22.46■■□□□ 1.19
LTBP3-208ENST00000527339 PDIA6Q15084 440 aa22.46■■□□□ 1.19
LTBP3-208ENST00000527339 HDGFL1Q5TGJ6 251 aa22.46■■□□□ 1.19
LTBP3-208ENST00000527339 C16orf71Q8IYS4 520 aaPredicted RBP22.46■■□□□ 1.19
LTBP3-208ENST00000527339 TSR2Q969E8 191 aaKnown RBP22.46■■□□□ 1.19
LTBP3-208ENST00000527339 SERPINB2P05120 415 aa22.45■■□□□ 1.18
LTBP3-208ENST00000527339 CLEC4GQ6UXB4 293 aa22.45■■□□□ 1.18
LTBP3-208ENST00000527339 NECTIN2Q92692 538 aa22.45■■□□□ 1.18
LTBP3-208ENST00000527339 ZNF652Q9Y2D9 606 aa22.45■■□□□ 1.18
LTBP3-208ENST00000527339 LRP10Q7Z4F1 713 aa22.44■■□□□ 1.18
LTBP3-208ENST00000527339 JMYQ8N9B5 988 aa22.44■■□□□ 1.18
LTBP3-208ENST00000527339 TNRC6CQ9HCJ0 1690 aaKnown RBP22.44■■□□□ 1.18
LTBP3-208ENST00000527339 DDX21Q9NR30 783 aaKnown RBP eCLIP22.44■■□□□ 1.18
LTBP3-208ENST00000527339 DLEC1Q9Y238 1755 aa22.44■■□□□ 1.18
LTBP3-208ENST00000527339 ZNF521Q96K83 1311 aa22.43■■□□□ 1.18
LTBP3-208ENST00000527339 COL13A1Q5TAT6 717 aaPredicted RBP22.43■■□□□ 1.18
LTBP3-208ENST00000527339 TBC1D9BQ66K14 1250 aa22.43■■□□□ 1.18
LTBP3-208ENST00000527339 KIF6Q6ZMV9 814 aa22.43■■□□□ 1.18
LTBP3-208ENST00000527339 C8orf58Q8NAV2 365 aa22.43■■□□□ 1.18
LTBP3-208ENST00000527339 CHMP4AQ9BY43 222 aa22.43■■□□□ 1.18
LTBP3-208ENST00000527339 MAP3K15Q6ZN16 1313 aa22.42■■□□□ 1.18
LTBP3-208ENST00000527339 FANCIQ9NVI1 1328 aa22.42■■□□□ 1.18
LTBP3-208ENST00000527339 ERVV-1B6SEH8 477 aa22.42■■□□□ 1.18
LTBP3-208ENST00000527339 NFKBIEO00221 500 aa22.42■■□□□ 1.18
LTBP3-208ENST00000527339 PROSER3Q2NL68 480 aa22.42■■□□□ 1.18
LTBP3-208ENST00000527339 BICDL1Q6ZP65 573 aa22.42■■□□□ 1.18
LTBP3-208ENST00000527339 DBF4Q9UBU7 674 aaPredicted RBP22.42■■□□□ 1.18
LTBP3-208ENST00000527339 CCDC88AQ3V6T2 1871 aa22.41■■□□□ 1.18
LTBP3-208ENST00000527339 ELL2O00472 640 aaPredicted RBP22.41■■□□□ 1.18
LTBP3-208ENST00000527339 ANXA1P04083 346 aa22.41■■□□□ 1.18
LTBP3-208ENST00000527339 TTLL7Q6ZT98 887 aa22.41■■□□□ 1.18
LTBP3-208ENST00000527339 CHPF2Q9P2E5 772 aa22.41■■□□□ 1.18
LTBP3-208ENST00000527339 LMNB1P20700 586 aa22.4■■□□□ 1.18
LTBP3-208ENST00000527339 C2CD5Q86YS7 1000 aa22.4■■□□□ 1.18
LTBP3-208ENST00000527339 CCDC24Q8N4L8 307 aa22.4■■□□□ 1.18
LTBP3-208ENST00000527339 TTLL6Q8N841 843 aa22.4■■□□□ 1.18
LTBP3-208ENST00000527339 SETDB2Q96T68 719 aa22.4■■□□□ 1.18
LTBP3-208ENST00000527339 MYH16Q9H6N6 1097 aa22.4■■□□□ 1.18
LTBP3-208ENST00000527339 ANKRD31Q8N7Z5 1873 aa22.4■■□□□ 1.18
LTBP3-208ENST00000527339 POTECB2RU33 542 aa22.39■■□□□ 1.17
LTBP3-208ENST00000527339 TSPYL6Q8N831 410 aa22.39■■□□□ 1.17
LTBP3-208ENST00000527339 SPINK5Q9NQ38 1064 aaPredicted RBP22.39■■□□□ 1.17
LTBP3-208ENST00000527339 CACNA1FO60840 1977 aa22.38■■□□□ 1.17
LTBP3-208ENST00000527339 GLTPD2A6NH11 291 aa22.38■■□□□ 1.17
LTBP3-208ENST00000527339 GOLGA2Q08379 1002 aa22.38■■□□□ 1.17
LTBP3-208ENST00000527339 HLFQ16534 295 aa22.38■■□□□ 1.17
LTBP3-208ENST00000527339 ANKRD36CQ5JPF3 1778 aa22.38■■□□□ 1.17
LTBP3-208ENST00000527339 TWISTNBQ3B726 338 aaPredicted RBP22.37■■□□□ 1.17
LTBP3-208ENST00000527339 CCDC30Q5VVM6 783 aa22.37■■□□□ 1.17
LTBP3-208ENST00000527339 COPS6Q7L5N1 327 aa22.37■■□□□ 1.17
LTBP3-208ENST00000527339 SMC1BQ8NDV3 1235 aa22.37■■□□□ 1.17
LTBP3-208ENST00000527339 XAGE3Q8WTP9 111 aa22.37■■□□□ 1.17
LTBP3-208ENST00000527339 ZBTB3Q9H5J0 574 aa22.37■■□□□ 1.17
LTBP3-208ENST00000527339 HYPKQ9NX55 129 aa22.37■■□□□ 1.17
LTBP3-208ENST00000527339 ZC3H4Q9UPT8 1303 aaKnown RBP22.36■■□□□ 1.17
LTBP3-208ENST00000527339 GIGYF2Q6Y7W6 1299 aaKnown RBP22.36■■□□□ 1.17
LTBP3-208ENST00000527339 NIP7Q9Y221 180 aaKnown RBP eCLIP22.36■■□□□ 1.17
LTBP3-208ENST00000527339 TIAM2Q8IVF5 1701 aa22.36■■□□□ 1.17
LTBP3-208ENST00000527339 COL11A2P13942 1736 aaPredicted RBP22.35■■□□□ 1.17
LTBP3-208ENST00000527339 AIMP1Q12904 312 aaKnown RBP22.35■■□□□ 1.17
LTBP3-208ENST00000527339 H0YIN7 160 aa22.34■■□□□ 1.17
LTBP3-208ENST00000527339 VEGFAP15692 232 aaPredicted RBP22.34■■□□□ 1.17
LTBP3-208ENST00000527339 EXOSC9Q06265 439 aaKnown RBP22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms