RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, human

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLNS1A-209	ENST00000527299	NID1	P14543	1247 aa		6.64	□□□□□ -1.35
CLNS1A-209	ENST00000527299	GRIK4	Q16099	956 aa		6.64	□□□□□ -1.35
CLNS1A-209	ENST00000527299	C8orf86	Q6ZUL3	223 aa		6.64	□□□□□ -1.35
CLNS1A-209	ENST00000527299	NBPF11	Q86T75	865 aa		6.64	□□□□□ -1.35
CLNS1A-209	ENST00000527299	C7orf43	Q8WVR3	580 aa		6.64	□□□□□ -1.35
CLNS1A-209	ENST00000527299	SLC30A3	Q99726	388 aa		6.64	□□□□□ -1.35
CLNS1A-209	ENST00000527299	PRM3	Q9NNZ6	103 aa		6.64	□□□□□ -1.35
CLNS1A-209	ENST00000527299	PCDHGA11	Q9Y5H2	935 aa		6.64	□□□□□ -1.35
CLNS1A-209	ENST00000527299	EML1	O00423	815 aa		6.63	□□□□□ -1.35
CLNS1A-209	ENST00000527299	H2AFB1	P0C5Y9	115 aa		6.63	□□□□□ -1.35
CLNS1A-209	ENST00000527299	H2AFB2	P0C5Z0	115 aa		6.63	□□□□□ -1.35
CLNS1A-209	ENST00000527299	VAC14	Q08AM6	782 aa		6.63	□□□□□ -1.35
CLNS1A-209	ENST00000527299	SCHIP1	Q9P0W5	487 aa	Predicted RBP	6.63	□□□□□ -1.35
CLNS1A-209	ENST00000527299	SFSWAP	Q12872	951 aa	Known RBP	6.62	□□□□□ -1.35
CLNS1A-209	ENST00000527299	TEAD4	Q15561	434 aa		6.62	□□□□□ -1.35
CLNS1A-209	ENST00000527299	LRRC69	Q6ZNQ3	347 aa		6.62	□□□□□ -1.35
CLNS1A-209	ENST00000527299	C20orf204	Q6ZNR8	217 aa		6.62	□□□□□ -1.35
CLNS1A-209	ENST00000527299	GPC6	Q9Y625	555 aa	Predicted RBP	6.62	□□□□□ -1.35
CLNS1A-209	ENST00000527299	C9orf172	C9J069	976 aa		6.61	□□□□□ -1.35
CLNS1A-209	ENST00000527299	BACH1	O14867	736 aa		6.61	□□□□□ -1.35
CLNS1A-209	ENST00000527299	NOS2	P35228	1153 aa		6.61	□□□□□ -1.35
CLNS1A-209	ENST00000527299	ADH7	P40394	386 aa		6.61	□□□□□ -1.35
CLNS1A-209	ENST00000527299	LRP8	Q14114	963 aa		6.61	□□□□□ -1.35
CLNS1A-209	ENST00000527299	ADGRE1	Q14246	886 aa		6.61	□□□□□ -1.35
CLNS1A-209	ENST00000527299	L3MBTL2	Q969R5	705 aa		6.61	□□□□□ -1.35
CLNS1A-209	ENST00000527299	SELP	P16109	830 aa		6.6	□□□□□ -1.35
CLNS1A-209	ENST00000527299	MBTPS1	Q14703	1052 aa		6.6	□□□□□ -1.35
CLNS1A-209	ENST00000527299	EPHA4	P54764	986 aa		6.59	□□□□□ -1.35
CLNS1A-209	ENST00000527299	SPEM2	Q0P670	501 aa		6.59	□□□□□ -1.35
CLNS1A-209	ENST00000527299	HYAL3	O43820	417 aa	Predicted RBP	6.58	□□□□□ -1.36
CLNS1A-209	ENST00000527299	ELN	P15502	786 aa		6.58	□□□□□ -1.36
CLNS1A-209	ENST00000527299	SOX11	P35716	441 aa		6.58	□□□□□ -1.36
CLNS1A-209	ENST00000527299	KCNQ4	P56696	695 aa		6.58	□□□□□ -1.36
CLNS1A-209	ENST00000527299	NEUROD1	Q13562	356 aa		6.58	□□□□□ -1.36
CLNS1A-209	ENST00000527299	WASHC4	Q2M389	1173 aa		6.58	□□□□□ -1.36
CLNS1A-209	ENST00000527299	TRAPPC3L	Q5T215	181 aa		6.58	□□□□□ -1.36
CLNS1A-209	ENST00000527299	TXNRD3	Q86VQ6	643 aa		6.58	□□□□□ -1.36
CLNS1A-209	ENST00000527299	KRTAP19-1	Q8IUB9	90 aa		6.58	□□□□□ -1.36
CLNS1A-209	ENST00000527299	LENG1	Q96BZ8	264 aa	Predicted RBP	6.58	□□□□□ -1.36
CLNS1A-209	ENST00000527299	KRTAP9-9	Q9BYP9	154 aa		6.58	□□□□□ -1.36
CLNS1A-209	ENST00000527299	KRTAP9-4	Q9BYQ2	154 aa		6.58	□□□□□ -1.36
CLNS1A-209	ENST00000527299	NEUROD4	Q9HD90	331 aa		6.58	□□□□□ -1.36
CLNS1A-209	ENST00000527299	ZNF358	Q9NW07	568 aa		6.58	□□□□□ -1.36
CLNS1A-209	ENST00000527299		A0A0A0MRY4	1105 aa		6.57	□□□□□ -1.36
CLNS1A-209	ENST00000527299	BRPF1	P55201	1214 aa	Predicted RBP	6.57	□□□□□ -1.36
CLNS1A-209	ENST00000527299	SEMA3F	Q13275	785 aa		6.57	□□□□□ -1.36
CLNS1A-209	ENST00000527299	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	6.57	□□□□□ -1.36
CLNS1A-209	ENST00000527299	PIK3CD	O00329	1044 aa		6.56	□□□□□ -1.36
CLNS1A-209	ENST00000527299	LILRB5	O75023	590 aa		6.56	□□□□□ -1.36
CLNS1A-209	ENST00000527299	NRG1	Q02297	640 aa	Predicted RBP	6.56	□□□□□ -1.36
CLNS1A-209	ENST00000527299	EML3	Q32P44	896 aa		6.56	□□□□□ -1.36
CLNS1A-209	ENST00000527299	RAB44	Q7Z6P3	723 aa	Predicted RBP	6.56	□□□□□ -1.36
CLNS1A-209	ENST00000527299	SLC9A9	Q8IVB4	645 aa		6.56	□□□□□ -1.36
CLNS1A-209	ENST00000527299	GDPD2	Q9HCC8	539 aa		6.56	□□□□□ -1.36
CLNS1A-209	ENST00000527299	SERTM1	A2A2V5	107 aa		6.55	□□□□□ -1.36
CLNS1A-209	ENST00000527299	LZTS3	O60299	673 aa	Predicted RBP	6.55	□□□□□ -1.36
CLNS1A-209	ENST00000527299	GTF2I	P78347	998 aa		6.55	□□□□□ -1.36
CLNS1A-209	ENST00000527299	SH3PXD2A	Q5TCZ1	1133 aa		6.55	□□□□□ -1.36
CLNS1A-209	ENST00000527299	ILDR2	Q71H61	639 aa		6.55	□□□□□ -1.36
CLNS1A-209	ENST00000527299	RHPN1	Q8TCX5	695 aa		6.55	□□□□□ -1.36
CLNS1A-209	ENST00000527299	SSBP4	Q9BWG4	385 aa	Predicted RBP	6.55	□□□□□ -1.36
CLNS1A-209	ENST00000527299	BRD7	Q9NPI1	651 aa		6.55	□□□□□ -1.36
CLNS1A-209	ENST00000527299	ZNF232	Q9UNY5	417 aa		6.55	□□□□□ -1.36
CLNS1A-209	ENST00000527299	NOD1	Q9Y239	953 aa		6.55	□□□□□ -1.36
CLNS1A-209	ENST00000527299	ABL2	P42684	1182 aa		6.54	□□□□□ -1.36
CLNS1A-209	ENST00000527299	TBCEL	Q5QJ74	424 aa		6.54	□□□□□ -1.36
CLNS1A-209	ENST00000527299	POTEA	Q6S8J7	498 aa		6.54	□□□□□ -1.36
CLNS1A-209	ENST00000527299	SHISA2	Q6UWI4	295 aa		6.54	□□□□□ -1.36
CLNS1A-209	ENST00000527299	TP53INP1	Q96A56	240 aa		6.54	□□□□□ -1.36
CLNS1A-209	ENST00000527299	BCAN	Q96GW7	911 aa		6.54	□□□□□ -1.36
CLNS1A-209	ENST00000527299	BTBD11	A6QL63	1104 aa		6.53	□□□□□ -1.36
CLNS1A-209	ENST00000527299	C1orf53	Q5VUE5	145 aa		6.53	□□□□□ -1.36
CLNS1A-209	ENST00000527299	TNS4	Q8IZW8	715 aa		6.53	□□□□□ -1.36
CLNS1A-209	ENST00000527299	CEP63	Q96MT8	703 aa		6.53	□□□□□ -1.36
CLNS1A-209	ENST00000527299	GOLGA2P5	Q9HBQ8	144 aa		6.53	□□□□□ -1.36
CLNS1A-209	ENST00000527299	ANKIB1	Q9P2G1	1089 aa		6.53	□□□□□ -1.36
CLNS1A-209	ENST00000527299	KCNH4	Q9UQ05	1017 aa		6.53	□□□□□ -1.36
CLNS1A-209	ENST00000527299	SFI1	A8K8P3	1242 aa		6.52	□□□□□ -1.37
CLNS1A-209	ENST00000527299	HIRA	P54198	1017 aa	Predicted RBP	6.52	□□□□□ -1.37
CLNS1A-209	ENST00000527299	RAC1	P63000	192 aa		6.52	□□□□□ -1.37
CLNS1A-209	ENST00000527299	TYRO3	Q06418	890 aa		6.52	□□□□□ -1.37
CLNS1A-209	ENST00000527299	SKI	P12755	728 aa		6.51	□□□□□ -1.37
CLNS1A-209	ENST00000527299	PSMA6	P60900	246 aa	Known RBP	6.51	□□□□□ -1.37
CLNS1A-209	ENST00000527299	PSME1	Q06323	249 aa		6.51	□□□□□ -1.37
CLNS1A-209	ENST00000527299	FMR1NB	Q8N0W7	255 aa	Predicted RBP	6.51	□□□□□ -1.37
CLNS1A-209	ENST00000527299	NFATC2IP	Q8NCF5	419 aa		6.51	□□□□□ -1.37
CLNS1A-209	ENST00000527299	BHMT	Q93088	406 aa		6.51	□□□□□ -1.37
CLNS1A-209	ENST00000527299	HSH2D	Q96JZ2	352 aa		6.51	□□□□□ -1.37
CLNS1A-209	ENST00000527299	JPH1	Q9HDC5	661 aa	Predicted RBP	6.51	□□□□□ -1.37
CLNS1A-209	ENST00000527299	SLC6A14	Q9UN76	642 aa		6.51	□□□□□ -1.37
CLNS1A-209	ENST00000527299	AFF1	P51825	1210 aa	Known RBP	6.5	□□□□□ -1.37
CLNS1A-209	ENST00000527299	NCOA4	Q13772	614 aa		6.5	□□□□□ -1.37
CLNS1A-209	ENST00000527299	ZNF280C	Q8ND82	737 aa		6.5	□□□□□ -1.37
CLNS1A-209	ENST00000527299	NUDT8	Q8WV74	236 aa		6.5	□□□□□ -1.37
CLNS1A-209	ENST00000527299	SUSD3	Q96L08	255 aa		6.5	□□□□□ -1.37
CLNS1A-209	ENST00000527299	UBE2O	Q9C0C9	1292 aa	Known RBP	6.5	□□□□□ -1.37
CLNS1A-209	ENST00000527299	RNF112	Q9ULX5	631 aa		6.5	□□□□□ -1.37
CLNS1A-209	ENST00000527299	KRTAP4-8	A0A0G2JLE6	195 aa		6.49	□□□□□ -1.37
CLNS1A-209	ENST00000527299	PHACTR1	Q9C0D0	580 aa		6.49	□□□□□ -1.37
CLNS1A-209	ENST00000527299	EFCC1	Q9HA90	598 aa		6.49	□□□□□ -1.37

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