RNA–Protein interactions for RNA: ENST00000527237.1

TRIM3-205, Transcript of tripartite motif containing 3, humanhuman

TSL 1 (best)

Gene TRIM3, Length 339 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-205ENST00000527237 PROSER3Q2NL68 480 aa23.7■■□□□ 1.38
TRIM3-205ENST00000527237 TTLL7Q6ZT98 887 aa23.7■■□□□ 1.38
TRIM3-205ENST00000527237 NECTIN2Q92692 538 aa23.7■■□□□ 1.38
TRIM3-205ENST00000527237 HLFQ16534 295 aa23.69■■□□□ 1.38
TRIM3-205ENST00000527237 MBIPQ9NS73 344 aa23.69■■□□□ 1.38
TRIM3-205ENST00000527237 LAMB2P55268 1798 aa23.69■■□□□ 1.38
TRIM3-205ENST00000527237 PDIA6Q15084 440 aa23.68■■□□□ 1.38
TRIM3-205ENST00000527237 LRP10Q7Z4F1 713 aa23.68■■□□□ 1.38
TRIM3-205ENST00000527237 CFAP44Q96MT7 982 aa23.68■■□□□ 1.38
TRIM3-205ENST00000527237 BCS1LQ9Y276 419 aa23.68■■□□□ 1.38
TRIM3-205ENST00000527237 GRIN3BO60391 1043 aa23.67■■□□□ 1.38
TRIM3-205ENST00000527237 ZNF853P0CG23 659 aa23.67■■□□□ 1.38
TRIM3-205ENST00000527237 PRR5LQ6MZQ0 368 aa23.67■■□□□ 1.38
TRIM3-205ENST00000527237 SLX4Q8IY92 1834 aa23.67■■□□□ 1.38
TRIM3-205ENST00000527237 ERBB4Q15303 1308 aa23.66■■□□□ 1.38
TRIM3-205ENST00000527237 MAP3K15Q6ZN16 1313 aa23.65■■□□□ 1.38
TRIM3-205ENST00000527237 SETDB2Q96T68 719 aa23.65■■□□□ 1.38
TRIM3-205ENST00000527237 FER1L6Q2WGJ9 1857 aa23.64■■□□□ 1.38
TRIM3-205ENST00000527237 CLEC4GQ6UXB4 293 aa23.64■■□□□ 1.37
TRIM3-205ENST00000527237 ZBTB3Q9H5J0 574 aa23.64■■□□□ 1.37
TRIM3-205ENST00000527237 IFT57Q9NWB7 429 aa23.64■■□□□ 1.37
TRIM3-205ENST00000527237 ZNF652Q9Y2D9 606 aa23.64■■□□□ 1.37
TRIM3-205ENST00000527237 ATP10DQ9P241 1426 aa23.64■■□□□ 1.37
TRIM3-205ENST00000527237 TIAM2Q8IVF5 1701 aa23.63■■□□□ 1.37
TRIM3-205ENST00000527237 CNBD1Q8NA66 436 aa23.63■■□□□ 1.37
TRIM3-205ENST00000527237 NIP7Q9Y221 180 aaKnown RBP eCLIP23.63■■□□□ 1.37
TRIM3-205ENST00000527237 KIF6Q6ZMV9 814 aa23.62■■□□□ 1.37
TRIM3-205ENST00000527237 FAM9BQ8IZU0 186 aa23.62■■□□□ 1.37
TRIM3-205ENST00000527237 FAM177BA6PVY3 158 aa23.61■■□□□ 1.37
TRIM3-205ENST00000527237 GNAI1P63096 354 aa23.61■■□□□ 1.37
TRIM3-205ENST00000527237 PIM2Q9P1W9 311 aa23.61■■□□□ 1.37
TRIM3-205ENST00000527237 DDX60Q8IY21 1712 aaKnown RBP23.6■■□□□ 1.37
TRIM3-205ENST00000527237 HDGFL1Q5TGJ6 251 aa23.6■■□□□ 1.37
TRIM3-205ENST00000527237 DUSP27Q5VZP5 1158 aa23.6■■□□□ 1.37
TRIM3-205ENST00000527237 C2CD5Q86YS7 1000 aa23.6■■□□□ 1.37
TRIM3-205ENST00000527237 WWC1Q8IX03 1113 aa23.6■■□□□ 1.37
TRIM3-205ENST00000527237 CHPF2Q9P2E5 772 aa23.6■■□□□ 1.37
TRIM3-205ENST00000527237 SALL2Q9Y467 1007 aaPredicted RBP23.6■■□□□ 1.37
TRIM3-205ENST00000527237 UBN2Q6ZU65 1347 aa23.59■■□□□ 1.37
TRIM3-205ENST00000527237 DICER1Q9UPY3 1922 aaKnown RBP23.59■■□□□ 1.37
TRIM3-205ENST00000527237 ERVV-1B6SEH8 477 aa23.59■■□□□ 1.37
TRIM3-205ENST00000527237 RGL2O15211 777 aa23.59■■□□□ 1.37
TRIM3-205ENST00000527237 CALD1Q05682 793 aaKnown RBP23.59■■□□□ 1.37
TRIM3-205ENST00000527237 CCDC27Q2M243 656 aa23.59■■□□□ 1.37
TRIM3-205ENST00000527237 NBPF5PQ86XG9 351 aaPredicted RBP23.59■■□□□ 1.37
TRIM3-205ENST00000527237 ZNF784Q8NCA9 323 aaPredicted RBP23.59■■□□□ 1.37
TRIM3-205ENST00000527237 TSR2Q969E8 191 aaKnown RBP23.59■■□□□ 1.37
TRIM3-205ENST00000527237 ADCY9O60503 1353 aa23.59■■□□□ 1.37
TRIM3-205ENST00000527237 ABCC12Q96J65 1359 aa23.59■■□□□ 1.37
TRIM3-205ENST00000527237 CACNA1FO60840 1977 aa23.59■■□□□ 1.37
TRIM3-205ENST00000527237 NPHP1O15259 732 aa23.58■■□□□ 1.37
TRIM3-205ENST00000527237 GPTP24298 496 aa23.58■■□□□ 1.37
TRIM3-205ENST00000527237 DALRD3Q5D0E6 543 aaKnown RBP23.58■■□□□ 1.37
TRIM3-205ENST00000527237 HOXB7P09629 217 aa23.57■■□□□ 1.36
TRIM3-205ENST00000527237 ST5P78524 1137 aa23.57■■□□□ 1.36
TRIM3-205ENST00000527237 AIMP1Q12904 312 aaKnown RBP23.57■■□□□ 1.36
TRIM3-205ENST00000527237 XAGE3Q8WTP9 111 aa23.57■■□□□ 1.36
TRIM3-205ENST00000527237 DDX21Q9NR30 783 aaKnown RBP eCLIP23.57■■□□□ 1.36
TRIM3-205ENST00000527237 TAF1P21675 1872 aa23.56■■□□□ 1.36
TRIM3-205ENST00000527237 ELL2O00472 640 aaPredicted RBP23.56■■□□□ 1.36
TRIM3-205ENST00000527237 COPS6Q7L5N1 327 aa23.56■■□□□ 1.36
TRIM3-205ENST00000527237 C8orf58Q8NAV2 365 aa23.56■■□□□ 1.36
TRIM3-205ENST00000527237 BRIP1Q9BX63 1249 aa23.56■■□□□ 1.36
TRIM3-205ENST00000527237 GIGYF2Q6Y7W6 1299 aaKnown RBP23.55■■□□□ 1.36
TRIM3-205ENST00000527237 H0YIN7 160 aa23.54■■□□□ 1.36
TRIM3-205ENST00000527237 PDE6BP35913 854 aa23.54■■□□□ 1.36
TRIM3-205ENST00000527237 ARHGAP27Q6ZUM4 889 aa23.54■■□□□ 1.36
TRIM3-205ENST00000527237 NUTM1Q86Y26 1132 aa23.53■■□□□ 1.36
TRIM3-205ENST00000527237 TSPYL6Q8N831 410 aa23.53■■□□□ 1.36
TRIM3-205ENST00000527237 IBTKQ9P2D0 1353 aaPredicted RBP23.52■■□□□ 1.36
TRIM3-205ENST00000527237 ZNF34Q8IZ26 560 aa23.52■■□□□ 1.36
TRIM3-205ENST00000527237 ZNF622Q969S3 477 aaKnown RBP eCLIP23.52■■□□□ 1.36
TRIM3-205ENST00000527237 SUSD4Q5VX71 490 aa23.51■■□□□ 1.35
TRIM3-205ENST00000527237 TTLL6Q8N841 843 aa23.51■■□□□ 1.35
TRIM3-205ENST00000527237 NTSR2O95665 410 aa23.5■■□□□ 1.35
TRIM3-205ENST00000527237 SRGNP10124 158 aa23.5■■□□□ 1.35
TRIM3-205ENST00000527237 RASSF7Q02833 373 aa23.5■■□□□ 1.35
TRIM3-205ENST00000527237 ERFEQ4G0M1 354 aa23.5■■□□□ 1.35
TRIM3-205ENST00000527237 TPTE2Q6XPS3 522 aa23.5■■□□□ 1.35
TRIM3-205ENST00000527237 DBF4Q9UBU7 674 aaPredicted RBP23.5■■□□□ 1.35
TRIM3-205ENST00000527237 FANCIQ9NVI1 1328 aa23.5■■□□□ 1.35
TRIM3-205ENST00000527237 NCBP3Q53F19 620 aaKnown RBP23.49■■□□□ 1.35
TRIM3-205ENST00000527237 ZNF428Q96B54 188 aa23.49■■□□□ 1.35
TRIM3-205ENST00000527237 IL16Q14005 1332 aa23.49■■□□□ 1.35
TRIM3-205ENST00000527237 RIC1Q4ADV7 1423 aa23.49■■□□□ 1.35
TRIM3-205ENST00000527237 ZNF219Q9P2Y4 722 aaPredicted RBP23.48■■□□□ 1.35
TRIM3-205ENST00000527237 NYXQ9GZU5 481 aa23.47■■□□□ 1.35
TRIM3-205ENST00000527237 PHAXQ9H814 394 aaKnown RBP23.47■■□□□ 1.35
TRIM3-205ENST00000527237 SPINK5Q9NQ38 1064 aaPredicted RBP23.47■■□□□ 1.35
TRIM3-205ENST00000527237 MYH3P11055 1940 aa23.47■■□□□ 1.35
TRIM3-205ENST00000527237 GTF2E1P29083 439 aaPredicted RBP23.46■■□□□ 1.35
TRIM3-205ENST00000527237 STYK1Q6J9G0 422 aa23.46■■□□□ 1.35
TRIM3-205ENST00000527237 PDZRN3Q9UPQ7 1066 aa23.46■■□□□ 1.35
TRIM3-205ENST00000527237 KLRG2A4D1S0 409 aaPredicted RBP23.45■■□□□ 1.34
TRIM3-205ENST00000527237 TCERG1O14776 1098 aaKnown RBP23.45■■□□□ 1.34
TRIM3-205ENST00000527237 PRELPP51888 382 aa23.45■■□□□ 1.34
TRIM3-205ENST00000527237 PRPF40BQ6NWY9 871 aaKnown RBP23.45■■□□□ 1.34
TRIM3-205ENST00000527237 MASTLQ96GX5 879 aa23.45■■□□□ 1.34
TRIM3-205ENST00000527237 HYPKQ9NX55 129 aa23.45■■□□□ 1.34
TRIM3-205ENST00000527237 C21orf2O43822 256 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms