RNA–Protein interactions for RNA: ENST00000527125.1

SCN3B-203, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 3

Gene SCN3B, Length 3,289 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-203ENST00000527125 RIOK3O14730 519 aaKnown RBP11.15□□□□□ -0.62
SCN3B-203ENST00000527125 MTX1Q13505 466 aa11.15□□□□□ -0.62
SCN3B-203ENST00000527125 VPS53Q5VIR6 699 aa11.15□□□□□ -0.62
SCN3B-203ENST00000527125 ANO2Q9NQ90 1003 aa11.15□□□□□ -0.62
SCN3B-203ENST00000527125 MRVI1Q9Y6F6 885 aa11.15□□□□□ -0.62
SCN3B-203ENST00000527125 NCAPD2Q15021 1401 aa11.15□□□□□ -0.62
SCN3B-203ENST00000527125 FLT4P35916 1363 aa11.15□□□□□ -0.62
SCN3B-203ENST00000527125 ZBTB22O15209 634 aa11.15□□□□□ -0.62
SCN3B-203ENST00000527125 NECTIN1Q15223 517 aa11.15□□□□□ -0.62
SCN3B-203ENST00000527125 NCBP1Q09161 790 aaKnown RBP11.15□□□□□ -0.63
SCN3B-203ENST00000527125 LRRFIP2Q9Y608 721 aaKnown RBP11.14□□□□□ -0.63
SCN3B-203ENST00000527125 ERBB3P21860 1342 aa11.14□□□□□ -0.63
SCN3B-203ENST00000527125 APBB1O00213 710 aa11.13□□□□□ -0.63
SCN3B-203ENST00000527125 PPP4R3BQ5MIZ7 849 aa11.13□□□□□ -0.63
SCN3B-203ENST00000527125 MIS18AQ9NYP9 233 aa11.13□□□□□ -0.63
SCN3B-203ENST00000527125 CTNNA3Q9UI47 895 aa11.13□□□□□ -0.63
SCN3B-203ENST00000527125 NFAT5O94916 1531 aa11.13□□□□□ -0.63
SCN3B-203ENST00000527125 HOMEZQ8IX15 550 aa11.13□□□□□ -0.63
SCN3B-203ENST00000527125 FEZ1Q99689 392 aa11.13□□□□□ -0.63
SCN3B-203ENST00000527125 TTC41PQ6P2S7 1318 aa11.13□□□□□ -0.63
SCN3B-203ENST00000527125 CDC25BP30305 580 aa11.13□□□□□ -0.63
SCN3B-203ENST00000527125 FGD1P98174 961 aa11.13□□□□□ -0.63
SCN3B-203ENST00000527125 GIMAP6Q6P9H5 292 aa11.13□□□□□ -0.63
SCN3B-203ENST00000527125 TDRD7Q8NHU6 1098 aaKnown RBP11.13□□□□□ -0.63
SCN3B-203ENST00000527125 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.13□□□□□ -0.63
SCN3B-203ENST00000527125 ACEP12821 1306 aa11.13□□□□□ -0.63
SCN3B-203ENST00000527125 PDIA4P13667 645 aaKnown RBP11.12□□□□□ -0.63
SCN3B-203ENST00000527125 COL9A3Q14050 684 aaPredicted RBP11.12□□□□□ -0.63
SCN3B-203ENST00000527125 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.12□□□□□ -0.63
SCN3B-203ENST00000527125 TTC6Q86TZ1 520 aa11.12□□□□□ -0.63
SCN3B-203ENST00000527125 RHPN1Q8TCX5 695 aa11.12□□□□□ -0.63
SCN3B-203ENST00000527125 PRDM10Q9NQV6 1147 aa11.12□□□□□ -0.63
SCN3B-203ENST00000527125 HEG1Q9ULI3 1381 aa11.12□□□□□ -0.63
SCN3B-203ENST00000527125 GIGYF1O75420 1035 aaPredicted RBP11.12□□□□□ -0.63
SCN3B-203ENST00000527125 C5P01031 1676 aa11.12□□□□□ -0.63
SCN3B-203ENST00000527125 ADRA2BP18089 450 aa11.12□□□□□ -0.63
SCN3B-203ENST00000527125 ADCK5Q3MIX3 580 aa11.12□□□□□ -0.63
SCN3B-203ENST00000527125 DNM1Q05193 864 aaKnown RBP11.11□□□□□ -0.63
SCN3B-203ENST00000527125 CYB5RLQ6IPT4 315 aa11.11□□□□□ -0.63
SCN3B-203ENST00000527125 FAM200AQ8TCP9 573 aa11.11□□□□□ -0.63
SCN3B-203ENST00000527125 TSPYL4Q9UJ04 414 aa11.11□□□□□ -0.63
SCN3B-203ENST00000527125 PTH1RQ03431 593 aa11.11□□□□□ -0.63
SCN3B-203ENST00000527125 SH2B1Q9NRF2 756 aaPredicted RBP11.11□□□□□ -0.63
SCN3B-203ENST00000527125 MORC2Q9Y6X9 1032 aaPredicted RBP11.11□□□□□ -0.63
SCN3B-203ENST00000527125 ARHGAP23Q9P227 1491 aa11.11□□□□□ -0.63
SCN3B-203ENST00000527125 MED23Q9ULK4 1368 aa11.11□□□□□ -0.63
SCN3B-203ENST00000527125 RBM6P78332 1123 aaKnown RBP11.11□□□□□ -0.63
SCN3B-203ENST00000527125 PLCB2Q00722 1185 aa11.11□□□□□ -0.63
SCN3B-203ENST00000527125 ME3Q16798 604 aa11.11□□□□□ -0.63
SCN3B-203ENST00000527125 TSGA10IPQ3SY00 556 aa11.11□□□□□ -0.63
SCN3B-203ENST00000527125 CCDC30Q5VVM6 783 aa11.11□□□□□ -0.63
SCN3B-203ENST00000527125 IL17REQ8NFR9 667 aa11.11□□□□□ -0.63
SCN3B-203ENST00000527125 RTF1Q92541 710 aaKnown RBP11.11□□□□□ -0.63
SCN3B-203ENST00000527125 EYA1Q99502 592 aa11.11□□□□□ -0.63
SCN3B-203ENST00000527125 GJB2P29033 226 aa11.1□□□□□ -0.63
SCN3B-203ENST00000527125 TXNDC2Q86VQ3 553 aa11.1□□□□□ -0.63
SCN3B-203ENST00000527125 RILPL2Q969X0 211 aa11.1□□□□□ -0.63
SCN3B-203ENST00000527125 ZSCAN31Q96LW9 406 aaPredicted RBP11.1□□□□□ -0.63
SCN3B-203ENST00000527125 DIAPH3Q9NSV4 1193 aa11.1□□□□□ -0.63
SCN3B-203ENST00000527125 PLEKHG1Q9ULL1 1385 aa11.1□□□□□ -0.63
SCN3B-203ENST00000527125 PTMAP06454 111 aaKnown RBP11.1□□□□□ -0.63
SCN3B-203ENST00000527125 BEND3Q5T5X7 828 aa11.1□□□□□ -0.63
SCN3B-203ENST00000527125 SARM1Q6SZW1 724 aa11.1□□□□□ -0.63
SCN3B-203ENST00000527125 DDX41Q9UJV9 622 aaKnown RBP11.1□□□□□ -0.63
SCN3B-203ENST00000527125 ATP6V1DQ9Y5K8 247 aa11.1□□□□□ -0.63
SCN3B-203ENST00000527125 OVOS2A0A0G2JMS6 1433 aa11.1□□□□□ -0.63
SCN3B-203ENST00000527125 TMEM2Q9UHN6 1383 aa11.1□□□□□ -0.63
SCN3B-203ENST00000527125 FAM177BA6PVY3 158 aa11.1□□□□□ -0.63
SCN3B-203ENST00000527125 NYAP1Q6ZVC0 841 aa11.1□□□□□ -0.63
SCN3B-203ENST00000527125 SMTNL1A8MU46 457 aa11.09□□□□□ -0.63
SCN3B-203ENST00000527125 LIG1P18858 919 aa11.09□□□□□ -0.63
SCN3B-203ENST00000527125 PPP1R42Q7Z4L9 355 aa11.09□□□□□ -0.63
SCN3B-203ENST00000527125 PDCL2Q8N4E4 241 aa11.09□□□□□ -0.63
SCN3B-203ENST00000527125 MAP4K1Q92918 833 aa11.09□□□□□ -0.63
SCN3B-203ENST00000527125 OGFRQ9NZT2 677 aa11.09□□□□□ -0.63
SCN3B-203ENST00000527125 UTYO14607 1347 aa11.09□□□□□ -0.63
SCN3B-203ENST00000527125 CBX1P83916 185 aa11.09□□□□□ -0.63
SCN3B-203ENST00000527125 NUTM1Q86Y26 1132 aa11.09□□□□□ -0.63
SCN3B-203ENST00000527125 KIF1BPQ96EK5 621 aa11.09□□□□□ -0.63
SCN3B-203ENST00000527125 TPCN1Q9ULQ1 816 aa11.09□□□□□ -0.63
SCN3B-203ENST00000527125 TRIM6-TRIM34B2RNG4 842 aa11.08□□□□□ -0.64
SCN3B-203ENST00000527125 SLFN14P0C7P3 912 aa11.08□□□□□ -0.64
SCN3B-203ENST00000527125 ZNF75DP51815 510 aa11.08□□□□□ -0.64
SCN3B-203ENST00000527125 IQCB1Q15051 598 aa11.08□□□□□ -0.64
SCN3B-203ENST00000527125 SLC4A10Q6U841 1118 aa11.08□□□□□ -0.64
SCN3B-203ENST00000527125 ZHX1Q9UKY1 873 aaPredicted RBP11.08□□□□□ -0.64
SCN3B-203ENST00000527125 GLI3P10071 1580 aa11.08□□□□□ -0.64
SCN3B-203ENST00000527125 U2AF2P26368 475 aaKnown RBP eCLIP11.08□□□□□ -0.64
SCN3B-203ENST00000527125 TYRO3Q06418 890 aa11.08□□□□□ -0.64
SCN3B-203ENST00000527125 ZSCAN25Q6NSZ9 544 aa11.08□□□□□ -0.64
SCN3B-203ENST00000527125 NOL8Q76FK4 1167 aaKnown RBP11.08□□□□□ -0.64
SCN3B-203ENST00000527125 MPNDQ8N594 471 aa11.08□□□□□ -0.64
SCN3B-203ENST00000527125 CBX8Q9HC52 389 aa11.08□□□□□ -0.64
SCN3B-203ENST00000527125 ECM29Q5VYK3 1845 aa11.08□□□□□ -0.64
SCN3B-203ENST00000527125 NPM1P06748 294 aaKnown RBP eCLIP11.08□□□□□ -0.64
SCN3B-203ENST00000527125 HOXB7P09629 217 aa11.08□□□□□ -0.64
SCN3B-203ENST00000527125 CCDC192P0DO97 292 aa11.08□□□□□ -0.64
SCN3B-203ENST00000527125 CPA1P15085 419 aa11.08□□□□□ -0.64
SCN3B-203ENST00000527125 PTGS1P23219 599 aa11.08□□□□□ -0.64
SCN3B-203ENST00000527125 CLSTN2Q9H4D0 955 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms