RNA–Protein interactions for RNA: ENST00000527045.1

FDFT1-211, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 1 (best)

Gene FDFT1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-211ENST00000527045 KIF20BQ96Q89 1820 aa12.16□□□□□ -0.46
FDFT1-211ENST00000527045 ERVV-2B6SEH9 535 aa12.15□□□□□ -0.46
FDFT1-211ENST00000527045 EMILIN1Q9Y6C2 1016 aa12.15□□□□□ -0.46
FDFT1-211ENST00000527045 TONSLQ96HA7 1378 aa12.15□□□□□ -0.46
FDFT1-211ENST00000527045 SLX4Q8IY92 1834 aa12.14□□□□□ -0.47
FDFT1-211ENST00000527045 AOC2O75106 756 aa12.14□□□□□ -0.47
FDFT1-211ENST00000527045 ECE1P42892 770 aa12.14□□□□□ -0.47
FDFT1-211ENST00000527045 FMR1Q06787 632 aaKnown RBP eCLIP12.14□□□□□ -0.47
FDFT1-211ENST00000527045 INTS5Q6P9B9 1019 aaKnown RBP12.14□□□□□ -0.47
FDFT1-211ENST00000527045 EYA1Q99502 592 aa12.14□□□□□ -0.47
FDFT1-211ENST00000527045 HACL1Q9UJ83 578 aa12.14□□□□□ -0.47
FDFT1-211ENST00000527045 TRPM7Q96QT4 1865 aa12.14□□□□□ -0.47
FDFT1-211ENST00000527045 LTBP3Q9NS15 1303 aa12.13□□□□□ -0.47
FDFT1-211ENST00000527045 PPM1GO15355 546 aaPredicted RBP12.13□□□□□ -0.47
FDFT1-211ENST00000527045 EPHX2P34913 555 aa12.13□□□□□ -0.47
FDFT1-211ENST00000527045 CABP4P57796 275 aa12.13□□□□□ -0.47
FDFT1-211ENST00000527045 DDX21Q9NR30 783 aaKnown RBP eCLIP12.13□□□□□ -0.47
FDFT1-211ENST00000527045 KIF24Q5T7B8 1368 aa12.13□□□□□ -0.47
FDFT1-211ENST00000527045 ZNF541Q9H0D2 1346 aa12.12□□□□□ -0.47
FDFT1-211ENST00000527045 GCC1Q96CN9 775 aa12.12□□□□□ -0.47
FDFT1-211ENST00000527045 PUS7Q96PZ0 661 aaKnown RBP12.12□□□□□ -0.47
FDFT1-211ENST00000527045 CARD11Q9BXL7 1154 aa12.12□□□□□ -0.47
FDFT1-211ENST00000527045 GALR2O43603 387 aaPredicted RBP12.11□□□□□ -0.47
FDFT1-211ENST00000527045 BICDL1Q6ZP65 573 aa12.11□□□□□ -0.47
FDFT1-211ENST00000527045 CCDC24Q8N4L8 307 aa12.11□□□□□ -0.47
FDFT1-211ENST00000527045 BCL2L12Q9HB09 334 aa12.11□□□□□ -0.47
FDFT1-211ENST00000527045 NARFQ9UHQ1 456 aa12.11□□□□□ -0.47
FDFT1-211ENST00000527045 ANKRD26Q9UPS8 1709 aa12.11□□□□□ -0.47
FDFT1-211ENST00000527045 SOS1Q07889 1333 aaPredicted RBP12.11□□□□□ -0.47
FDFT1-211ENST00000527045 RNF123Q5XPI4 1314 aa12.11□□□□□ -0.47
FDFT1-211ENST00000527045 PNMA8AQ86V59 439 aaPredicted RBP12.1□□□□□ -0.47
FDFT1-211ENST00000527045 ARFGEF2Q9Y6D5 1785 aa12.1□□□□□ -0.47
FDFT1-211ENST00000527045 COL15A1P39059 1388 aa12.09□□□□□ -0.47
FDFT1-211ENST00000527045 MAP2K2P36507 400 aa12.09□□□□□ -0.47
FDFT1-211ENST00000527045 DNAJC10Q8IXB1 793 aa12.09□□□□□ -0.47
FDFT1-211ENST00000527045 DLL1O00548 723 aa12.08□□□□□ -0.48
FDFT1-211ENST00000527045 CA12O43570 354 aa12.08□□□□□ -0.48
FDFT1-211ENST00000527045 HSP90AB1P08238 724 aaKnown RBP12.08□□□□□ -0.48
FDFT1-211ENST00000527045 PDE6BP35913 854 aa12.08□□□□□ -0.48
FDFT1-211ENST00000527045 MNX1P50219 401 aaPredicted RBP12.08□□□□□ -0.48
FDFT1-211ENST00000527045 HABP4Q5JVS0 413 aaKnown RBP12.08□□□□□ -0.48
FDFT1-211ENST00000527045 NFATC2IPQ8NCF5 419 aa12.08□□□□□ -0.48
FDFT1-211ENST00000527045 SIN3AQ96ST3 1273 aa12.08□□□□□ -0.48
FDFT1-211ENST00000527045 TRAF5O00463 557 aa12.07□□□□□ -0.48
FDFT1-211ENST00000527045 CST9Q5W186 159 aa12.07□□□□□ -0.48
FDFT1-211ENST00000527045 PRPF40BQ6NWY9 871 aaKnown RBP12.07□□□□□ -0.48
FDFT1-211ENST00000527045 TLL2Q9Y6L7 1015 aa12.07□□□□□ -0.48
FDFT1-211ENST00000527045 ZNF530Q6P9A1 599 aaPredicted RBP12.06□□□□□ -0.48
FDFT1-211ENST00000527045 BRIP1Q9BX63 1249 aa12.06□□□□□ -0.48
FDFT1-211ENST00000527045 ZNF277Q9NRM2 450 aaPredicted RBP12.06□□□□□ -0.48
FDFT1-211ENST00000527045 PDZRN3Q9UPQ7 1066 aa12.06□□□□□ -0.48
FDFT1-211ENST00000527045 WASHC2AQ641Q2 1341 aa12.06□□□□□ -0.48
FDFT1-211ENST00000527045 ST20-MTHFSA0A0A6YYL1 179 aa12.05□□□□□ -0.48
FDFT1-211ENST00000527045 MTHFSP49914 203 aa12.05□□□□□ -0.48
FDFT1-211ENST00000527045 NEUROD1Q13562 356 aa12.05□□□□□ -0.48
FDFT1-211ENST00000527045 SOGA3Q5TF21 947 aa12.05□□□□□ -0.48
FDFT1-211ENST00000527045 CIAPIN1Q6FI81 312 aa12.05□□□□□ -0.48
FDFT1-211ENST00000527045 PRR5LQ6MZQ0 368 aa12.05□□□□□ -0.48
FDFT1-211ENST00000527045 CNKSR1Q969H4 720 aa12.05□□□□□ -0.48
FDFT1-211ENST00000527045 PHF12Q96QT6 1004 aa12.05□□□□□ -0.48
FDFT1-211ENST00000527045 ZBTB1Q9Y2K1 713 aa12.05□□□□□ -0.48
FDFT1-211ENST00000527045 CYP19A1P11511 503 aaPredicted RBP12.04□□□□□ -0.48
FDFT1-211ENST00000527045 BRPF1P55201 1214 aaPredicted RBP12.04□□□□□ -0.48
FDFT1-211ENST00000527045 TBC1D9BQ66K14 1250 aa12.04□□□□□ -0.48
FDFT1-211ENST00000527045 TESK2Q96S53 571 aa12.04□□□□□ -0.48
FDFT1-211ENST00000527045 SCN11AQ9UI33 1791 aa12.03□□□□□ -0.48
FDFT1-211ENST00000527045 PLEKHO1Q53GL0 409 aaPredicted RBP12.03□□□□□ -0.48
FDFT1-211ENST00000527045 STYK1Q6J9G0 422 aa12.03□□□□□ -0.48
FDFT1-211ENST00000527045 SRGNP10124 158 aa12.02□□□□□ -0.49
FDFT1-211ENST00000527045 CANXP27824 592 aaKnown RBP12.02□□□□□ -0.49
FDFT1-211ENST00000527045 FKBP4Q02790 459 aaKnown RBP eCLIP12.02□□□□□ -0.49
FDFT1-211ENST00000527045 EIF4A2Q14240 407 aaKnown RBP12.02□□□□□ -0.49
FDFT1-211ENST00000527045 CCDC93Q567U6 631 aa12.02□□□□□ -0.49
FDFT1-211ENST00000527045 OLFM4Q6UX06 510 aa12.02□□□□□ -0.49
FDFT1-211ENST00000527045 SAPCD2Q86UD0 394 aa12.02□□□□□ -0.49
FDFT1-211ENST00000527045 GPC2Q8N158 579 aa12.02□□□□□ -0.49
FDFT1-211ENST00000527045 FZD9O00144 591 aa12.01□□□□□ -0.49
FDFT1-211ENST00000527045 NBPF15Q8N660 670 aa12.01□□□□□ -0.49
FDFT1-211ENST00000527045 C7orf43Q8WVR3 580 aa12.01□□□□□ -0.49
FDFT1-211ENST00000527045 MASTLQ96GX5 879 aa12.01□□□□□ -0.49
FDFT1-211ENST00000527045 ZIC5Q96T25 663 aa12.01□□□□□ -0.49
FDFT1-211ENST00000527045 GJA3Q9Y6H8 435 aa12.01□□□□□ -0.49
FDFT1-211ENST00000527045 SCN7AQ01118 1682 aa12□□□□□ -0.49
FDFT1-211ENST00000527045 NPHP1O15259 732 aa12□□□□□ -0.49
FDFT1-211ENST00000527045 CELF2O95319 508 aaKnown RBP12□□□□□ -0.49
FDFT1-211ENST00000527045 LMOD1P29536 600 aaPredicted RBP12□□□□□ -0.49
FDFT1-211ENST00000527045 EPS15P42566 896 aa12□□□□□ -0.49
FDFT1-211ENST00000527045 FXR1P51114 621 aaKnown RBP eCLIP12□□□□□ -0.494e-6■■■■■ 27.4
FDFT1-211ENST00000527045 C1orf141Q5JVX7 400 aa12□□□□□ -0.49
FDFT1-211ENST00000527045 BCORQ6W2J9 1755 aa12□□□□□ -0.49
FDFT1-211ENST00000527045 IARSP41252 1262 aaKnown RBP11.99□□□□□ -0.49
FDFT1-211ENST00000527045 SLC39A6Q13433 755 aa11.99□□□□□ -0.49
FDFT1-211ENST00000527045 CNBD1Q8NA66 436 aa11.99□□□□□ -0.49
FDFT1-211ENST00000527045 POLKQ9UBT6 870 aa11.99□□□□□ -0.49
FDFT1-211ENST00000527045 AKAP11Q9UKA4 1901 aa11.98□□□□□ -0.49
FDFT1-211ENST00000527045 AMOTQ4VCS5 1084 aa11.98□□□□□ -0.49
FDFT1-211ENST00000527045 ZNF408Q9H9D4 720 aa11.98□□□□□ -0.49
FDFT1-211ENST00000527045 SCNN1DP51172 638 aa11.97□□□□□ -0.49
FDFT1-211ENST00000527045 ST5P78524 1137 aa11.97□□□□□ -0.49
FDFT1-211ENST00000527045 SYNE4Q8N205 404 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms