RNA–Protein interactions for RNA: ENST00000526058.1

CCS-203, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 4

Gene CCS, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-203ENST00000526058 DLEC1Q9Y238 1755 aa22.21■■□□□ 1.15
CCS-203ENST00000526058 SENP3-EIF4A1A0A087X0R7 540 aa22.21■■□□□ 1.15
CCS-203ENST00000526058 PDIA6Q15084 440 aa22.21■■□□□ 1.15
CCS-203ENST00000526058 CFAP44Q96MT7 982 aa22.21■■□□□ 1.15
CCS-203ENST00000526058 NUP98P52948 1817 aa22.21■■□□□ 1.15
CCS-203ENST00000526058 C2CD5Q86YS7 1000 aa22.2■■□□□ 1.14
CCS-203ENST00000526058 CNBD1Q8NA66 436 aa22.2■■□□□ 1.14
CCS-203ENST00000526058 NECTIN2Q92692 538 aa22.2■■□□□ 1.14
CCS-203ENST00000526058 ERBB4Q15303 1308 aa22.2■■□□□ 1.14
CCS-203ENST00000526058 ANXA1P04083 346 aa22.19■■□□□ 1.14
CCS-203ENST00000526058 PROSER3Q2NL68 480 aa22.19■■□□□ 1.14
CCS-203ENST00000526058 ARHGAP27Q6ZUM4 889 aa22.19■■□□□ 1.14
CCS-203ENST00000526058 LRP10Q7Z4F1 713 aa22.19■■□□□ 1.14
CCS-203ENST00000526058 BRIP1Q9BX63 1249 aa22.19■■□□□ 1.14
CCS-203ENST00000526058 NIP7Q9Y221 180 aaKnown RBP eCLIP22.19■■□□□ 1.14
CCS-203ENST00000526058 MAP3K15Q6ZN16 1313 aa22.18■■□□□ 1.14
CCS-203ENST00000526058 H0YIN7 160 aa22.18■■□□□ 1.14
CCS-203ENST00000526058 RGL2O15211 777 aa22.18■■□□□ 1.14
CCS-203ENST00000526058 NPHP1O15259 732 aa22.18■■□□□ 1.14
CCS-203ENST00000526058 ZNF853P0CG23 659 aa22.18■■□□□ 1.14
CCS-203ENST00000526058 NBPF5PQ86XG9 351 aaPredicted RBP22.18■■□□□ 1.14
CCS-203ENST00000526058 MBIPQ9NS73 344 aa22.18■■□□□ 1.14
CCS-203ENST00000526058 ERVV-1B6SEH8 477 aa22.17■■□□□ 1.14
CCS-203ENST00000526058 KIF6Q6ZMV9 814 aa22.17■■□□□ 1.14
CCS-203ENST00000526058 COL11A2P13942 1736 aaPredicted RBP22.17■■□□□ 1.14
CCS-203ENST00000526058 FAM177BA6PVY3 158 aa22.16■■□□□ 1.14
CCS-203ENST00000526058 PDE6BP35913 854 aa22.16■■□□□ 1.14
CCS-203ENST00000526058 ST5P78524 1137 aa22.16■■□□□ 1.14
CCS-203ENST00000526058 ZBTB3Q9H5J0 574 aa22.16■■□□□ 1.14
CCS-203ENST00000526058 IFT57Q9NWB7 429 aa22.15■■□□□ 1.14
CCS-203ENST00000526058 ATP10DQ9P241 1426 aa22.14■■□□□ 1.14
CCS-203ENST00000526058 ADCY9O60503 1353 aa22.14■■□□□ 1.14
CCS-203ENST00000526058 TTLL6Q8N841 843 aa22.14■■□□□ 1.13
CCS-203ENST00000526058 GNAI1P63096 354 aa22.13■■□□□ 1.13
CCS-203ENST00000526058 CALD1Q05682 793 aaKnown RBP22.13■■□□□ 1.13
CCS-203ENST00000526058 TPTE2Q6XPS3 522 aa22.13■■□□□ 1.13
CCS-203ENST00000526058 ZNF622Q969S3 477 aaKnown RBP eCLIP22.13■■□□□ 1.137e-11■□□□□ 9.8
CCS-203ENST00000526058 GPTP24298 496 aa22.12■■□□□ 1.13
CCS-203ENST00000526058 DUSP27Q5VZP5 1158 aa22.12■■□□□ 1.13
CCS-203ENST00000526058 CHPF2Q9P2E5 772 aa22.12■■□□□ 1.13
CCS-203ENST00000526058 PDZRN3Q9UPQ7 1066 aa22.12■■□□□ 1.13
CCS-203ENST00000526058 HOXB7P09629 217 aa22.11■■□□□ 1.13
CCS-203ENST00000526058 AIMP1Q12904 312 aaKnown RBP22.11■■□□□ 1.13
CCS-203ENST00000526058 HDGFL1Q5TGJ6 251 aa22.11■■□□□ 1.13
CCS-203ENST00000526058 GIGYF2Q6Y7W6 1299 aaKnown RBP22.11■■□□□ 1.13
CCS-203ENST00000526058 COPS6Q7L5N1 327 aa22.11■■□□□ 1.13
CCS-203ENST00000526058 XAGE3Q8WTP9 111 aa22.11■■□□□ 1.13
CCS-203ENST00000526058 DDX21Q9NR30 783 aaKnown RBP eCLIP22.11■■□□□ 1.13
CCS-203ENST00000526058 CACNA1SQ13698 1873 aa22.11■■□□□ 1.13
CCS-203ENST00000526058 UBN2Q6ZU65 1347 aa22.1■■□□□ 1.13
CCS-203ENST00000526058 SBF1O95248 1867 aa22.1■■□□□ 1.13
CCS-203ENST00000526058 ZNF34Q8IZ26 560 aa22.1■■□□□ 1.13
CCS-203ENST00000526058 SRGNP10124 158 aa22.09■■□□□ 1.13
CCS-203ENST00000526058 CCDC27Q2M243 656 aa22.09■■□□□ 1.13
CCS-203ENST00000526058 WWC1Q8IX03 1113 aa22.09■■□□□ 1.13
CCS-203ENST00000526058 ELL2O00472 640 aaPredicted RBP22.08■■□□□ 1.13
CCS-203ENST00000526058 GTF2E1P29083 439 aaPredicted RBP22.08■■□□□ 1.13
CCS-203ENST00000526058 SUSD4Q5VX71 490 aa22.08■■□□□ 1.13
CCS-203ENST00000526058 NUTM1Q86Y26 1132 aa22.08■■□□□ 1.13
CCS-203ENST00000526058 ZNF526Q8TF50 670 aaPredicted RBP22.08■■□□□ 1.13
CCS-203ENST00000526058 SLX4Q8IY92 1834 aa22.08■■□□□ 1.12
CCS-203ENST00000526058 KLRG2A4D1S0 409 aaPredicted RBP22.07■■□□□ 1.12
CCS-203ENST00000526058 C9orf131Q5VYM1 1079 aa22.07■■□□□ 1.12
CCS-203ENST00000526058 STYK1Q6J9G0 422 aa22.07■■□□□ 1.12
CCS-203ENST00000526058 FAM9BQ8IZU0 186 aa22.07■■□□□ 1.12
CCS-203ENST00000526058 C8orf58Q8NAV2 365 aa22.07■■□□□ 1.12
CCS-203ENST00000526058 MASTLQ96GX5 879 aa22.07■■□□□ 1.12
CCS-203ENST00000526058 ZNF219Q9P2Y4 722 aaPredicted RBP22.07■■□□□ 1.12
CCS-203ENST00000526058 RASSF7Q02833 373 aa22.06■■□□□ 1.12
CCS-203ENST00000526058 ERFEQ4G0M1 354 aa22.06■■□□□ 1.12
CCS-203ENST00000526058 NYXQ9GZU5 481 aa22.06■■□□□ 1.12
CCS-203ENST00000526058 DBF4Q9UBU7 674 aaPredicted RBP22.06■■□□□ 1.12
CCS-203ENST00000526058 SALL2Q9Y467 1007 aaPredicted RBP22.06■■□□□ 1.12
CCS-203ENST00000526058 ABCC12Q96J65 1359 aa22.06■■□□□ 1.12
CCS-203ENST00000526058 TNRC6CQ9HCJ0 1690 aaKnown RBP22.06■■□□□ 1.12
CCS-203ENST00000526058 ANKRD36CQ5JPF3 1778 aa22.05■■□□□ 1.12
CCS-203ENST00000526058 C21orf2O43822 256 aa22.05■■□□□ 1.12
CCS-203ENST00000526058 TSR2Q969E8 191 aaKnown RBP22.05■■□□□ 1.12
CCS-203ENST00000526058 CCDC88AQ3V6T2 1871 aa22.05■■□□□ 1.12
CCS-203ENST00000526058 ARFGEF2Q9Y6D5 1785 aa22.04■■□□□ 1.12
CCS-203ENST00000526058 CNKSR1Q969H4 720 aa22.04■■□□□ 1.12
CCS-203ENST00000526058 GPBP1L1Q9HC44 474 aaPredicted RBP22.04■■□□□ 1.12
CCS-203ENST00000526058 NTSR2O95665 410 aa22.03■■□□□ 1.12
CCS-203ENST00000526058 NPR1P16066 1061 aa22.03■■□□□ 1.12
CCS-203ENST00000526058 PRELPP51888 382 aa22.03■■□□□ 1.12
CCS-203ENST00000526058 NCBP3Q53F19 620 aaKnown RBP22.03■■□□□ 1.12
CCS-203ENST00000526058 PRPF40BQ6NWY9 871 aaKnown RBP22.03■■□□□ 1.12
CCS-203ENST00000526058 TSPYL6Q8N831 410 aa22.03■■□□□ 1.12
CCS-203ENST00000526058 RNF181Q9P0P0 153 aa22.03■■□□□ 1.12
CCS-203ENST00000526058 IBTKQ9P2D0 1353 aaPredicted RBP22.02■■□□□ 1.12
CCS-203ENST00000526058 NFKBIEO00221 500 aa22.02■■□□□ 1.12
CCS-203ENST00000526058 PARP10Q53GL7 1025 aa22.02■■□□□ 1.12
CCS-203ENST00000526058 HYPKQ9NX55 129 aa22.02■■□□□ 1.12
CCS-203ENST00000526058 FER1L6Q2WGJ9 1857 aa22.02■■□□□ 1.12
CCS-203ENST00000526058 TCIRG1Q13488 830 aa22.01■■□□□ 1.11
CCS-203ENST00000526058 PPP1R42Q7Z4L9 355 aa22.01■■□□□ 1.11
CCS-203ENST00000526058 HSP90AB3PQ58FF7 597 aa22■■□□□ 1.11
CCS-203ENST00000526058 ANKRD13DQ6ZTN6 518 aa22■■□□□ 1.11
CCS-203ENST00000526058 PLBD2Q8NHP8 589 aa22■■□□□ 1.11
CCS-203ENST00000526058 UTP14AQ9BVJ6 771 aaKnown RBP22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms