RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 NIFKQ9BYG3 293 aaKnown RBP7.97□□□□□ -1.13
USP47-206ENST00000525367 CHMP3Q9Y3E7 222 aa7.97□□□□□ -1.13
USP47-206ENST00000525367 H3BM21 787 aa7.96□□□□□ -1.14
USP47-206ENST00000525367 NPR3P17342 541 aa7.96□□□□□ -1.14
USP47-206ENST00000525367 PRICKLE2Q7Z3G6 844 aa7.96□□□□□ -1.14
USP47-206ENST00000525367 TRIM46Q7Z4K8 759 aa7.96□□□□□ -1.14
USP47-206ENST00000525367 MYO19Q96H55 970 aa7.96□□□□□ -1.14
USP47-206ENST00000525367 ANKRD33BA6NCL7 494 aa7.95□□□□□ -1.14
USP47-206ENST00000525367 RHOQP17081 205 aa7.95□□□□□ -1.14
USP47-206ENST00000525367 EIF1AXP47813 144 aaKnown RBP7.95□□□□□ -1.14
USP47-206ENST00000525367 POU4F2Q12837 409 aa7.95□□□□□ -1.14
USP47-206ENST00000525367 NPAS4Q8IUM7 802 aa7.95□□□□□ -1.14
USP47-206ENST00000525367 ETFBKMTQ8IXQ9 262 aa7.95□□□□□ -1.14
USP47-206ENST00000525367 CCDC87Q9NVE4 849 aa7.95□□□□□ -1.14
USP47-206ENST00000525367 STIM2Q9P246 746 aa7.95□□□□□ -1.14
USP47-206ENST00000525367 FIGNL2A6NMB9 653 aa7.94□□□□□ -1.14
USP47-206ENST00000525367 FZD6O60353 706 aa7.94□□□□□ -1.14
USP47-206ENST00000525367 GPC1P35052 558 aa7.94□□□□□ -1.14
USP47-206ENST00000525367 GNASQ5JWF2 1037 aa7.94□□□□□ -1.14
USP47-206ENST00000525367 AIDAQ96BJ3 306 aa7.94□□□□□ -1.14
USP47-206ENST00000525367 DCTN4Q9UJW0 460 aa7.94□□□□□ -1.14
USP47-206ENST00000525367 BCS1LQ9Y276 419 aa7.94□□□□□ -1.14
USP47-206ENST00000525367 UNCXA6NJT0 531 aa7.93□□□□□ -1.14
USP47-206ENST00000525367 FAM13AO94988 1023 aa7.93□□□□□ -1.14
USP47-206ENST00000525367 UPP2O95045 317 aa7.93□□□□□ -1.14
USP47-206ENST00000525367 GTF2E1P29083 439 aaPredicted RBP7.93□□□□□ -1.14
USP47-206ENST00000525367 TAGLNQ01995 201 aaKnown RBP7.93□□□□□ -1.14
USP47-206ENST00000525367 RTN1Q16799 776 aa7.93□□□□□ -1.14
USP47-206ENST00000525367 NBPF10Q6P3W6 841 aaKnown RBP7.93□□□□□ -1.14
USP47-206ENST00000525367 ERBB4Q15303 1308 aa7.93□□□□□ -1.14
USP47-206ENST00000525367 SPATA31C2B4DYI2 1134 aa7.92□□□□□ -1.14
USP47-206ENST00000525367 ATP4AP20648 1035 aa7.92□□□□□ -1.14
USP47-206ENST00000525367 ZNF280CQ8ND82 737 aa7.92□□□□□ -1.14
USP47-206ENST00000525367 C7orf43Q8WVR3 580 aa7.92□□□□□ -1.14
USP47-206ENST00000525367 HSH2DQ96JZ2 352 aa7.92□□□□□ -1.14
USP47-206ENST00000525367 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.92□□□□□ -1.14
USP47-206ENST00000525367 TTLL8A6PVC2 850 aa7.91□□□□□ -1.14
USP47-206ENST00000525367 C11orf91Q3C1V1 193 aa7.91□□□□□ -1.14
USP47-206ENST00000525367 RHPN1Q8TCX5 695 aa7.91□□□□□ -1.14
USP47-206ENST00000525367 ZFP42Q96MM3 310 aa7.91□□□□□ -1.14
USP47-206ENST00000525367 SOS2Q07890 1332 aaPredicted RBP7.9□□□□□ -1.14
USP47-206ENST00000525367 BRD2P25440 801 aaKnown RBP7.9□□□□□ -1.14
USP47-206ENST00000525367 AAMPQ13685 434 aa7.9□□□□□ -1.14
USP47-206ENST00000525367 LYSMD3Q7Z3D4 306 aa7.9□□□□□ -1.14
USP47-206ENST00000525367 TMC7Q7Z402 723 aa7.9□□□□□ -1.14
USP47-206ENST00000525367 IFT43Q96FT9 208 aa7.9□□□□□ -1.14
USP47-206ENST00000525367 ASB16Q96NS5 453 aa7.9□□□□□ -1.14
USP47-206ENST00000525367 DNMT3LQ9UJW3 386 aa7.9□□□□□ -1.14
USP47-206ENST00000525367 SOBPA7XYQ1 873 aa7.89□□□□□ -1.15
USP47-206ENST00000525367 VEGFBP49765 207 aa7.89□□□□□ -1.15
USP47-206ENST00000525367 C1orf53Q5VUE5 145 aa7.89□□□□□ -1.15
USP47-206ENST00000525367 TREML1Q86YW5 311 aa7.89□□□□□ -1.15
USP47-206ENST00000525367 POLIQ9UNA4 740 aa7.89□□□□□ -1.15
USP47-206ENST00000525367 USP20Q9Y2K6 914 aa7.89□□□□□ -1.15
USP47-206ENST00000525367 ZAP70P43403 619 aa7.88□□□□□ -1.15
USP47-206ENST00000525367 DNM1Q05193 864 aaKnown RBP7.88□□□□□ -1.15
USP47-206ENST00000525367 SCARF1Q14162 830 aa7.88□□□□□ -1.15
USP47-206ENST00000525367 NBPF1Q3BBV0 1214 aa7.88□□□□□ -1.15
USP47-206ENST00000525367 RGL4Q8IZJ4 473 aa7.88□□□□□ -1.15
USP47-206ENST00000525367 ABTB2Q8N961 1025 aa7.88□□□□□ -1.15
USP47-206ENST00000525367 GIPC2Q8TF65 315 aa7.88□□□□□ -1.15
USP47-206ENST00000525367 EDEM1Q92611 657 aa7.88□□□□□ -1.15
USP47-206ENST00000525367 SUSD3Q96L08 255 aa7.88□□□□□ -1.15
USP47-206ENST00000525367 BCL2L13Q9BXK5 485 aa7.88□□□□□ -1.15
USP47-206ENST00000525367 GPAMQ9HCL2 828 aa7.88□□□□□ -1.15
USP47-206ENST00000525367 BRPF3Q9ULD4 1205 aa7.88□□□□□ -1.15
USP47-206ENST00000525367 AMOTL2Q9Y2J4 779 aa7.88□□□□□ -1.15
USP47-206ENST00000525367 A6NHS1 94 aa7.87□□□□□ -1.15
USP47-206ENST00000525367 GPR182O15218 404 aa7.87□□□□□ -1.15
USP47-206ENST00000525367 NDUFB5O43674 189 aa7.87□□□□□ -1.15
USP47-206ENST00000525367 IGHA2P01877 340 aa7.87□□□□□ -1.15
USP47-206ENST00000525367 GSK3AP49840 483 aa7.87□□□□□ -1.15
USP47-206ENST00000525367 FBXO33Q7Z6M2 555 aa7.87□□□□□ -1.15
USP47-206ENST00000525367 RBCK1Q9BYM8 510 aa7.87□□□□□ -1.15
USP47-206ENST00000525367 ZDHHC3Q9NYG2 299 aa7.87□□□□□ -1.15
USP47-206ENST00000525367 RBM47A0AV96 593 aaKnown RBP7.86□□□□□ -1.15
USP47-206ENST00000525367 PDGFAP04085 211 aa7.86□□□□□ -1.15
USP47-206ENST00000525367 P4HBP07237 508 aaKnown RBP7.86□□□□□ -1.15
USP47-206ENST00000525367 ZNF16P17020 682 aaPredicted RBP7.86□□□□□ -1.15
USP47-206ENST00000525367 MSX1P28360 303 aa7.86□□□□□ -1.15
USP47-206ENST00000525367 BICDL1Q6ZP65 573 aa7.86□□□□□ -1.15
USP47-206ENST00000525367 GPR152Q8TDT2 470 aa7.86□□□□□ -1.15
USP47-206ENST00000525367 ZIC5Q96T25 663 aa7.86□□□□□ -1.15
USP47-206ENST00000525367 TIMMDC1Q9NPL8 285 aa7.86□□□□□ -1.15
USP47-206ENST00000525367 VSIG8P0DPA2 414 aa7.85□□□□□ -1.15
USP47-206ENST00000525367 TATP17735 454 aaPredicted RBP7.85□□□□□ -1.15
USP47-206ENST00000525367 ERCC3P19447 782 aa7.85□□□□□ -1.15
USP47-206ENST00000525367 KCNMA1Q12791 1236 aa7.85□□□□□ -1.15
USP47-206ENST00000525367 ALKBH2Q6NS38 261 aa7.85□□□□□ -1.15
USP47-206ENST00000525367 LRRC69Q6ZNQ3 347 aa7.85□□□□□ -1.15
USP47-206ENST00000525367 ZSCAN29Q8IWY8 852 aaPredicted RBP7.85□□□□□ -1.15
USP47-206ENST00000525367 TMC1Q8TDI8 760 aa7.85□□□□□ -1.15
USP47-206ENST00000525367 RUBCNLQ9H714 662 aa7.85□□□□□ -1.15
USP47-206ENST00000525367 DMGDHQ9UI17 866 aaKnown RBP7.85□□□□□ -1.15
USP47-206ENST00000525367 SENP3-EIF4A1A0A087X0R7 540 aa7.84□□□□□ -1.15
USP47-206ENST00000525367 TGFBR3LH3BV60 316 aa7.84□□□□□ -1.15
USP47-206ENST00000525367 OPLAHO14841 1288 aa7.84□□□□□ -1.15
USP47-206ENST00000525367 MICAL2O94851 1124 aa7.84□□□□□ -1.15
USP47-206ENST00000525367 SETDB2Q96T68 719 aa7.84□□□□□ -1.15
USP47-206ENST00000525367 FAM129BQ96TA1 746 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms