RNA–Protein interactions for RNA: ENST00000524520.5

SOX6-203, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 709 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-203ENST00000524520 NBPF10Q6P3W6 841 aaKnown RBP18.67■□□□□ 0.58
SOX6-203ENST00000524520 NBPF5PQ86XG9 351 aaPredicted RBP18.67■□□□□ 0.58
SOX6-203ENST00000524520 NBPF15Q8N660 670 aa18.67■□□□□ 0.58
SOX6-203ENST00000524520 SRGNP10124 158 aa18.66■□□□□ 0.58
SOX6-203ENST00000524520 MASTLQ96GX5 879 aa18.66■□□□□ 0.58
SOX6-203ENST00000524520 BABAM1Q9NWV8 329 aa18.66■□□□□ 0.58
SOX6-203ENST00000524520 MIS18AQ9NYP9 233 aa18.66■□□□□ 0.58
SOX6-203ENST00000524520 KDM3BQ7LBC6 1761 aa18.65■□□□□ 0.58
SOX6-203ENST00000524520 DICER1Q9UPY3 1922 aaKnown RBP18.65■□□□□ 0.58
SOX6-203ENST00000524520 GLTPD2A6NH11 291 aa18.65■□□□□ 0.58
SOX6-203ENST00000524520 ERVV-1B6SEH8 477 aa18.65■□□□□ 0.58
SOX6-203ENST00000524520 EIF4A1P60842 406 aaKnown RBP18.65■□□□□ 0.58
SOX6-203ENST00000524520 FSTL1Q12841 308 aa18.65■□□□□ 0.58
SOX6-203ENST00000524520 TNRC6CQ9HCJ0 1690 aaKnown RBP18.65■□□□□ 0.58
SOX6-203ENST00000524520 LAMB4A4D0S4 1761 aa18.65■□□□□ 0.58
SOX6-203ENST00000524520 FER1L6Q2WGJ9 1857 aa18.65■□□□□ 0.58
SOX6-203ENST00000524520 KLRG2A4D1S0 409 aaPredicted RBP18.64■□□□□ 0.57
SOX6-203ENST00000524520 PIP4K2AP48426 406 aaPredicted RBP18.64■□□□□ 0.57
SOX6-203ENST00000524520 RASSF7Q02833 373 aa18.64■□□□□ 0.57
SOX6-203ENST00000524520 DPY19L2Q6NUT2 758 aa18.64■□□□□ 0.57
SOX6-203ENST00000524520 RRAGCQ9HB90 399 aa18.64■□□□□ 0.57
SOX6-203ENST00000524520 NIP7Q9Y221 180 aaKnown RBP eCLIP18.64■□□□□ 0.57
SOX6-203ENST00000524520 LTBP3Q9NS15 1303 aa18.64■□□□□ 0.57
SOX6-203ENST00000524520 NFKBIEO00221 500 aa18.63■□□□□ 0.57
SOX6-203ENST00000524520 C21orf2O43822 256 aa18.63■□□□□ 0.57
SOX6-203ENST00000524520 VEGFAP15692 232 aaPredicted RBP18.63■□□□□ 0.57
SOX6-203ENST00000524520 LMOD3Q0VAK6 560 aa18.63■□□□□ 0.57
SOX6-203ENST00000524520 ERBB4Q15303 1308 aa18.63■□□□□ 0.57
SOX6-203ENST00000524520 NPR1P16066 1061 aa18.62■□□□□ 0.57
SOX6-203ENST00000524520 CCDC24Q8N4L8 307 aa18.62■□□□□ 0.57
SOX6-203ENST00000524520 NYXQ9GZU5 481 aa18.62■□□□□ 0.57
SOX6-203ENST00000524520 ARFGEF2Q9Y6D5 1785 aa18.62■□□□□ 0.57
SOX6-203ENST00000524520 NUP98P52948 1817 aa18.61■□□□□ 0.57
SOX6-203ENST00000524520 SLX4Q8IY92 1834 aa18.61■□□□□ 0.57
SOX6-203ENST00000524520 MYBBP1AQ9BQG0 1328 aaKnown RBP18.61■□□□□ 0.57
SOX6-203ENST00000524520 ALDH1B1P30837 517 aa18.61■□□□□ 0.57
SOX6-203ENST00000524520 RIPK4P57078 832 aa18.61■□□□□ 0.57
SOX6-203ENST00000524520 DDX10Q13206 875 aaKnown RBP18.61■□□□□ 0.57
SOX6-203ENST00000524520 COL11A2P13942 1736 aaPredicted RBP18.6■□□□□ 0.57
SOX6-203ENST00000524520 GTF2E1P29083 439 aaPredicted RBP18.6■□□□□ 0.57
SOX6-203ENST00000524520 PRPF40BQ6NWY9 871 aaKnown RBP18.6■□□□□ 0.57
SOX6-203ENST00000524520 MAP3K15Q6ZN16 1313 aa18.59■□□□□ 0.57
SOX6-203ENST00000524520 TMPOP42166 694 aaKnown RBP18.59■□□□□ 0.57
SOX6-203ENST00000524520 PRELPP51888 382 aa18.59■□□□□ 0.57
SOX6-203ENST00000524520 HLFQ16534 295 aa18.59■□□□□ 0.57
SOX6-203ENST00000524520 ERFEQ4G0M1 354 aa18.59■□□□□ 0.57
SOX6-203ENST00000524520 KIF6Q6ZMV9 814 aa18.59■□□□□ 0.57
SOX6-203ENST00000524520 TAOK3Q9H2K8 898 aa18.59■□□□□ 0.57
SOX6-203ENST00000524520 TSPYL4Q9UJ04 414 aa18.59■□□□□ 0.57
SOX6-203ENST00000524520 RRP7AQ9Y3A4 280 aaKnown RBP18.59■□□□□ 0.57
SOX6-203ENST00000524520 CACNA1SQ13698 1873 aa18.58■□□□□ 0.57
SOX6-203ENST00000524520 SMC1BQ8NDV3 1235 aa18.58■□□□□ 0.56
SOX6-203ENST00000524520 THUMPD2Q9BTF0 503 aaKnown RBP18.58■□□□□ 0.56
SOX6-203ENST00000524520 C7orf43Q8WVR3 580 aa18.57■□□□□ 0.56
SOX6-203ENST00000524520 ZNF219Q9P2Y4 722 aaPredicted RBP18.57■□□□□ 0.56
SOX6-203ENST00000524520 TIAM2Q8IVF5 1701 aa18.57■□□□□ 0.56
SOX6-203ENST00000524520 CCDC93Q567U6 631 aa18.56■□□□□ 0.56
SOX6-203ENST00000524520 RTKN2Q8IZC4 609 aa18.56■□□□□ 0.56
SOX6-203ENST00000524520 NGEFQ8N5V2 710 aa18.56■□□□□ 0.56
SOX6-203ENST00000524520 MYL6BP14649 208 aa18.55■□□□□ 0.56
SOX6-203ENST00000524520 GIGYF2Q6Y7W6 1299 aaKnown RBP18.55■□□□□ 0.56
SOX6-203ENST00000524520 DNAJC5GQ8N7S2 189 aa18.55■□□□□ 0.56
SOX6-203ENST00000524520 IBTKQ9P2D0 1353 aaPredicted RBP18.55■□□□□ 0.56
SOX6-203ENST00000524520 WDR43Q15061 677 aaKnown RBP eCLIP18.54■□□□□ 0.56
SOX6-203ENST00000524520 GRIPAP1Q4V328 841 aa18.54■□□□□ 0.56
SOX6-203ENST00000524520 CC2D2BQ6DHV5 1058 aa18.54■□□□□ 0.56
SOX6-203ENST00000524520 TTLL7Q6ZT98 887 aa18.54■□□□□ 0.56
SOX6-203ENST00000524520 RUNDC1Q96C34 613 aa18.54■□□□□ 0.56
SOX6-203ENST00000524520 WDR90Q96KV7 1748 aa18.54■□□□□ 0.56
SOX6-203ENST00000524520 FAM177BA6PVY3 158 aa18.53■□□□□ 0.56
SOX6-203ENST00000524520 CRY2Q49AN0 593 aa18.53■□□□□ 0.56
SOX6-203ENST00000524520 PARP10Q53GL7 1025 aa18.53■□□□□ 0.56
SOX6-203ENST00000524520 PPP1R42Q7Z4L9 355 aa18.53■□□□□ 0.56
SOX6-203ENST00000524520 ZNF34Q8IZ26 560 aa18.53■□□□□ 0.56
SOX6-203ENST00000524520 RIC1Q4ADV7 1423 aa18.52■□□□□ 0.56
SOX6-203ENST00000524520 FKBP4Q02790 459 aaKnown RBP eCLIP18.52■□□□□ 0.56
SOX6-203ENST00000524520 CHL1O00533 1208 aa18.51■□□□□ 0.55
SOX6-203ENST00000524520 EIF2S2P20042 333 aaKnown RBP18.51■□□□□ 0.55
SOX6-203ENST00000524520 HOXA10P31260 410 aaPredicted RBP18.51■□□□□ 0.55
SOX6-203ENST00000524520 ZBTB3Q9H5J0 574 aa18.51■□□□□ 0.55
SOX6-203ENST00000524520 POTECB2RU33 542 aa18.5■□□□□ 0.55
SOX6-203ENST00000524520 PDIA6Q15084 440 aa18.5■□□□□ 0.55
SOX6-203ENST00000524520 HSP90AB3PQ58FF7 597 aa18.5■□□□□ 0.55
SOX6-203ENST00000524520 RNF123Q5XPI4 1314 aa18.49■□□□□ 0.55
SOX6-203ENST00000524520 LRP10Q7Z4F1 713 aa18.49■□□□□ 0.55
SOX6-203ENST00000524520 RPGRQ92834 1020 aaKnown RBP18.49■□□□□ 0.55
SOX6-203ENST00000524520 PRKRIP1Q9H875 184 aaPredicted RBP18.49■□□□□ 0.55
SOX6-203ENST00000524520 IQCA1LA6NCM1 817 aa18.48■□□□□ 0.55
SOX6-203ENST00000524520 HOXB7P09629 217 aa18.48■□□□□ 0.55
SOX6-203ENST00000524520 GPTP24298 496 aa18.48■□□□□ 0.55
SOX6-203ENST00000524520 NEUROD2Q15784 382 aa18.48■□□□□ 0.55
SOX6-203ENST00000524520 SLC10A5Q5PT55 438 aa18.48■□□□□ 0.55
SOX6-203ENST00000524520 SUSD4Q5VX71 490 aa18.48■□□□□ 0.55
SOX6-203ENST00000524520 NUTM1Q86Y26 1132 aa18.48■□□□□ 0.55
SOX6-203ENST00000524520 NLRP3Q96P20 1036 aa18.48■□□□□ 0.55
SOX6-203ENST00000524520 CRAMP1Q96RY5 1269 aa18.48■□□□□ 0.55
SOX6-203ENST00000524520 PSMD1Q99460 953 aa18.48■□□□□ 0.55
SOX6-203ENST00000524520 ADAMTS8Q9UP79 889 aa18.48■□□□□ 0.55
SOX6-203ENST00000524520 SCN4AP35499 1836 aa18.48■□□□□ 0.55
SOX6-203ENST00000524520 KLRG1Q96E93 195 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms