RNA–Protein interactions for RNA: ENST00000524419.5

LDLRAD3-202, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 5 BASIC

Gene LDLRAD3, Length 1,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-202ENST00000524419 CHMLP26374 656 aa16.82■□□□□ 0.28
LDLRAD3-202ENST00000524419 NEXNQ0ZGT2 675 aa16.82■□□□□ 0.28
LDLRAD3-202ENST00000524419 TOM1L2Q6ZVM7 507 aa16.82■□□□□ 0.28
LDLRAD3-202ENST00000524419 ARFGEF2Q9Y6D5 1785 aa16.81■□□□□ 0.28
LDLRAD3-202ENST00000524419 ERC1Q8IUD2 1116 aa16.81■□□□□ 0.28
LDLRAD3-202ENST00000524419 XAGE3Q8WTP9 111 aa16.81■□□□□ 0.28
LDLRAD3-202ENST00000524419 UBR2Q8IWV8 1755 aa16.81■□□□□ 0.28
LDLRAD3-202ENST00000524419 ST18O60284 1047 aa16.8■□□□□ 0.28
LDLRAD3-202ENST00000524419 TRAK2O60296 914 aa16.8■□□□□ 0.28
LDLRAD3-202ENST00000524419 MCCP23508 829 aa16.8■□□□□ 0.28
LDLRAD3-202ENST00000524419 SUCLG2Q96I99 432 aa16.8■□□□□ 0.28
LDLRAD3-202ENST00000524419 PAPPAQ13219 1627 aa16.8■□□□□ 0.28
LDLRAD3-202ENST00000524419 SHANK3Q9BYB0 1731 aa16.8■□□□□ 0.28
LDLRAD3-202ENST00000524419 ZCRB1Q8TBF4 217 aaKnown RBP16.79■□□□□ 0.28
LDLRAD3-202ENST00000524419 PI4K2BQ8TCG2 481 aa16.79■□□□□ 0.28
LDLRAD3-202ENST00000524419 USP42Q9H9J4 1324 aaKnown RBP16.79■□□□□ 0.28
LDLRAD3-202ENST00000524419 RAB3GAP1Q15042 981 aa16.78■□□□□ 0.28
LDLRAD3-202ENST00000524419 COPS6Q7L5N1 327 aa16.78■□□□□ 0.28
LDLRAD3-202ENST00000524419 RTN4Q9NQC3 1192 aaKnown RBP16.78■□□□□ 0.28
LDLRAD3-202ENST00000524419 TTC41PQ6P2S7 1318 aa16.78■□□□□ 0.28
LDLRAD3-202ENST00000524419 FSD2A1L4K1 749 aa16.78■□□□□ 0.28
LDLRAD3-202ENST00000524419 NEURL1BA8MQ27 555 aa16.78■□□□□ 0.28
LDLRAD3-202ENST00000524419 IGKV5-2P06315 115 aa16.78■□□□□ 0.28
LDLRAD3-202ENST00000524419 PTMSP20962 102 aa16.78■□□□□ 0.28
LDLRAD3-202ENST00000524419 UNC5CLQ8IV45 518 aa16.78■□□□□ 0.28
LDLRAD3-202ENST00000524419 CLASRPQ8N2M8 674 aaKnown RBP16.78■□□□□ 0.28
LDLRAD3-202ENST00000524419 GPATCH3Q96I76 525 aa16.78■□□□□ 0.28
LDLRAD3-202ENST00000524419 METTL22Q9BUU2 404 aaPredicted RBP16.78■□□□□ 0.28
LDLRAD3-202ENST00000524419 FOXD4L1Q9NU39 408 aa16.78■□□□□ 0.28
LDLRAD3-202ENST00000524419 CNTROBQ8N137 903 aa16.77■□□□□ 0.28
LDLRAD3-202ENST00000524419 GBP4Q96PP9 640 aa16.77■□□□□ 0.28
LDLRAD3-202ENST00000524419 MYD88Q99836 296 aa16.77■□□□□ 0.28
LDLRAD3-202ENST00000524419 CARD10Q9BWT7 1032 aa16.77■□□□□ 0.28
LDLRAD3-202ENST00000524419 BICC1Q9H694 974 aaKnown RBP16.77■□□□□ 0.28
LDLRAD3-202ENST00000524419 ANO2Q9NQ90 1003 aa16.77■□□□□ 0.28
LDLRAD3-202ENST00000524419 USP16Q9Y5T5 823 aa16.77■□□□□ 0.28
LDLRAD3-202ENST00000524419 GOLGA6L3A6NEY3 463 aa16.77■□□□□ 0.27
LDLRAD3-202ENST00000524419 TNPO1Q92973 898 aaKnown RBP16.77■□□□□ 0.27
LDLRAD3-202ENST00000524419 ERVV-2B6SEH9 535 aa16.76■□□□□ 0.27
LDLRAD3-202ENST00000524419 IL2RBP14784 551 aa16.76■□□□□ 0.27
LDLRAD3-202ENST00000524419 GCKRQ14397 625 aa16.76■□□□□ 0.27
LDLRAD3-202ENST00000524419 ANKRD13DQ6ZTN6 518 aa16.76■□□□□ 0.27
LDLRAD3-202ENST00000524419 LRP10Q7Z4F1 713 aa16.76■□□□□ 0.27
LDLRAD3-202ENST00000524419 ERBB4Q15303 1308 aa16.75■□□□□ 0.27
LDLRAD3-202ENST00000524419 GLRX3O76003 335 aaKnown RBP16.75■□□□□ 0.27
LDLRAD3-202ENST00000524419 KAZALD1Q96I82 304 aa16.75■□□□□ 0.27
LDLRAD3-202ENST00000524419 PA2G4Q9UQ80 394 aaKnown RBP16.75■□□□□ 0.27
LDLRAD3-202ENST00000524419 EPB41L2O43491 1005 aaKnown RBP16.75■□□□□ 0.27
LDLRAD3-202ENST00000524419 MAP4K4O95819 1239 aaPredicted RBP16.75■□□□□ 0.27
LDLRAD3-202ENST00000524419 ANAPC15P60006 121 aa16.75■□□□□ 0.27
LDLRAD3-202ENST00000524419 IFIT2P09913 472 aaKnown RBP16.74■□□□□ 0.27
LDLRAD3-202ENST00000524419 G3BP1Q13283 466 aaKnown RBP eCLIP16.74■□□□□ 0.27
LDLRAD3-202ENST00000524419 FAM43AQ8N2R8 423 aa16.74■□□□□ 0.27
LDLRAD3-202ENST00000524419 NUP188Q5SRE5 1749 aa16.74■□□□□ 0.27
LDLRAD3-202ENST00000524419 KCPQ6ZWJ8 1503 aa16.74■□□□□ 0.27
LDLRAD3-202ENST00000524419 NKX1-1Q15270 411 aaPredicted RBP16.73■□□□□ 0.27
LDLRAD3-202ENST00000524419 STRN4Q9NRL3 753 aa16.73■□□□□ 0.27
LDLRAD3-202ENST00000524419 ECHDC1Q9NTX5 307 aa16.73■□□□□ 0.27
LDLRAD3-202ENST00000524419 ISY1Q9ULR0 285 aaKnown RBP16.73■□□□□ 0.27
LDLRAD3-202ENST00000524419 PIP4K2AP48426 406 aaPredicted RBP16.73■□□□□ 0.27
LDLRAD3-202ENST00000524419 EVA1CP58658 441 aa16.73■□□□□ 0.27
LDLRAD3-202ENST00000524419 SKOR2Q2VWA4 1001 aaPredicted RBP16.73■□□□□ 0.27
LDLRAD3-202ENST00000524419 AACSQ86V21 672 aa16.72■□□□□ 0.27
LDLRAD3-202ENST00000524419 TOGARAM1Q9Y4F4 1720 aa16.71■□□□□ 0.27
LDLRAD3-202ENST00000524419 CLEC17AQ6ZS10 378 aa16.71■□□□□ 0.27
LDLRAD3-202ENST00000524419 PLBD2Q8NHP8 589 aa16.71■□□□□ 0.27
LDLRAD3-202ENST00000524419 GZF1Q9H116 711 aaPredicted RBP16.71■□□□□ 0.27
LDLRAD3-202ENST00000524419 COL15A1P39059 1388 aa16.71■□□□□ 0.27
LDLRAD3-202ENST00000524419 MCM2P49736 904 aa16.71■□□□□ 0.27
LDLRAD3-202ENST00000524419 SGSM2O43147 1006 aa16.7■□□□□ 0.26
LDLRAD3-202ENST00000524419 XRCC6P12956 609 aaKnown RBP eCLIP16.7■□□□□ 0.26
LDLRAD3-202ENST00000524419 NEK4P51957 841 aa16.7■□□□□ 0.26
LDLRAD3-202ENST00000524419 IL17RAQ96F46 866 aa16.7■□□□□ 0.26
LDLRAD3-202ENST00000524419 CWC22Q9HCG8 908 aaKnown RBP16.7■□□□□ 0.26
LDLRAD3-202ENST00000524419 PALD1Q9ULE6 856 aa16.7■□□□□ 0.26
LDLRAD3-202ENST00000524419 TNS2Q63HR2 1409 aa16.7■□□□□ 0.26
LDLRAD3-202ENST00000524419 MRE11P49959 708 aa16.69■□□□□ 0.26
LDLRAD3-202ENST00000524419 DDX54Q8TDD1 881 aaKnown RBP16.69■□□□□ 0.26
LDLRAD3-202ENST00000524419 SASH1O94885 1247 aa16.69■□□□□ 0.26
LDLRAD3-202ENST00000524419 DIAPH3Q9NSV4 1193 aa16.69■□□□□ 0.26
LDLRAD3-202ENST00000524419 RAD50Q92878 1312 aa16.69■□□□□ 0.26
LDLRAD3-202ENST00000524419 COL14A1Q05707 1796 aaKnown RBP16.68■□□□□ 0.26
LDLRAD3-202ENST00000524419 SSFA2P28290 1259 aa16.68■□□□□ 0.26
LDLRAD3-202ENST00000524419 NUCB2P80303 420 aa16.68■□□□□ 0.26
LDLRAD3-202ENST00000524419 EPHA10Q5JZY3 1008 aa16.68■□□□□ 0.26
LDLRAD3-202ENST00000524419 RUFY2Q8WXA3 655 aa16.68■□□□□ 0.26
LDLRAD3-202ENST00000524419 SIL1Q9H173 461 aa16.68■□□□□ 0.26
LDLRAD3-202ENST00000524419 IL25Q9H293 177 aa16.68■□□□□ 0.26
LDLRAD3-202ENST00000524419 TJP1Q07157 1748 aa16.68■□□□□ 0.26
LDLRAD3-202ENST00000524419 HSPA4P34932 840 aa16.68■□□□□ 0.26
LDLRAD3-202ENST00000524419 KIAA1211Q6ZU35 1233 aa16.68■□□□□ 0.26
LDLRAD3-202ENST00000524419 UBE3BQ7Z3V4 1068 aa16.68■□□□□ 0.26
LDLRAD3-202ENST00000524419 NBPF26B4DH59 902 aa16.67■□□□□ 0.26
LDLRAD3-202ENST00000524419 ATP5J2-PTCD1G3V325 749 aa16.67■□□□□ 0.26
LDLRAD3-202ENST00000524419 PTCD1O75127 700 aaKnown RBP16.67■□□□□ 0.26
LDLRAD3-202ENST00000524419 NBPF14Q5TI25 921 aa16.67■□□□□ 0.26
LDLRAD3-202ENST00000524419 NBPF10Q6P3W6 841 aaKnown RBP16.67■□□□□ 0.26
LDLRAD3-202ENST00000524419 NBPF15Q8N660 670 aa16.67■□□□□ 0.26
LDLRAD3-202ENST00000524419 EVI5LQ96CN4 794 aa16.67■□□□□ 0.26
LDLRAD3-202ENST00000524419 A0A087WZG4 1122 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms