RNA–Protein interactions for RNA: ENST00000523702.5

CPS1-211, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 4

Gene CPS1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-211ENST00000523702 DCTN4Q9UJW0 460 aa9.66□□□□□ -0.86
CPS1-211ENST00000523702 DNMT3LQ9UJW3 386 aa9.66□□□□□ -0.86
CPS1-211ENST00000523702 ATP4AP20648 1035 aa9.65□□□□□ -0.86
CPS1-211ENST00000523702 CRIPAKQ8N1N5 446 aa9.65□□□□□ -0.86
CPS1-211ENST00000523702 HSH2DQ96JZ2 352 aa9.65□□□□□ -0.86
CPS1-211ENST00000523702 SOBPA7XYQ1 873 aa9.64□□□□□ -0.87
CPS1-211ENST00000523702 AAMPQ13685 434 aa9.64□□□□□ -0.87
CPS1-211ENST00000523702 NPAS4Q8IUM7 802 aa9.64□□□□□ -0.87
CPS1-211ENST00000523702 ZIC5Q96T25 663 aa9.64□□□□□ -0.87
CPS1-211ENST00000523702 MSX1P28360 303 aa9.63□□□□□ -0.87
CPS1-211ENST00000523702 TAGLNQ01995 201 aaKnown RBP9.63□□□□□ -0.87
CPS1-211ENST00000523702 RHPN1Q8TCX5 695 aa9.63□□□□□ -0.87
CPS1-211ENST00000523702 SUSD3Q96L08 255 aa9.63□□□□□ -0.87
CPS1-211ENST00000523702 TIMMDC1Q9NPL8 285 aa9.63□□□□□ -0.87
CPS1-211ENST00000523702 ZDHHC3Q9NYG2 299 aa9.63□□□□□ -0.87
CPS1-211ENST00000523702 DMGDHQ9UI17 866 aaKnown RBP9.63□□□□□ -0.87
CPS1-211ENST00000523702 OPLAHO14841 1288 aa9.62□□□□□ -0.87
CPS1-211ENST00000523702 RBM25P49756 843 aaKnown RBP9.62□□□□□ -0.87
CPS1-211ENST00000523702 WDR44Q5JSH3 913 aa9.62□□□□□ -0.87
CPS1-211ENST00000523702 TREML1Q86YW5 311 aa9.62□□□□□ -0.87
CPS1-211ENST00000523702 ASB16Q96NS5 453 aa9.62□□□□□ -0.87
CPS1-211ENST00000523702 ATP13A2Q9NQ11 1180 aa9.62□□□□□ -0.87
CPS1-211ENST00000523702 IGHA2P01877 340 aa9.61□□□□□ -0.87
CPS1-211ENST00000523702 ZAP70P43403 619 aa9.61□□□□□ -0.87
CPS1-211ENST00000523702 NBPF1Q3BBV0 1214 aa9.61□□□□□ -0.87
CPS1-211ENST00000523702 TMC7Q7Z402 723 aa9.61□□□□□ -0.87
CPS1-211ENST00000523702 POLIQ9UNA4 740 aa9.61□□□□□ -0.87
CPS1-211ENST00000523702 USP20Q9Y2K6 914 aa9.61□□□□□ -0.87
CPS1-211ENST00000523702 SENP3-EIF4A1A0A087X0R7 540 aa9.6□□□□□ -0.87
CPS1-211ENST00000523702 MICAL2O94851 1124 aa9.6□□□□□ -0.87
CPS1-211ENST00000523702 ALKBH2Q6NS38 261 aa9.6□□□□□ -0.87
CPS1-211ENST00000523702 BICDL1Q6ZP65 573 aa9.6□□□□□ -0.87
CPS1-211ENST00000523702 ABTB2Q8N961 1025 aa9.6□□□□□ -0.87
CPS1-211ENST00000523702 EDEM1Q92611 657 aa9.6□□□□□ -0.87
CPS1-211ENST00000523702 RBCK1Q9BYM8 510 aa9.6□□□□□ -0.87
CPS1-211ENST00000523702 GPAMQ9HCL2 828 aa9.6□□□□□ -0.87
CPS1-211ENST00000523702 BRPF3Q9ULD4 1205 aa9.6□□□□□ -0.87
CPS1-211ENST00000523702 AMOTL2Q9Y2J4 779 aa9.6□□□□□ -0.87
CPS1-211ENST00000523702 UNCXA6NJT0 531 aa9.59□□□□□ -0.87
CPS1-211ENST00000523702 DNM1Q05193 864 aaKnown RBP9.59□□□□□ -0.87
CPS1-211ENST00000523702 ARSJQ5FYB0 599 aaPredicted RBP9.59□□□□□ -0.87
CPS1-211ENST00000523702 LRRC69Q6ZNQ3 347 aa9.59□□□□□ -0.87
CPS1-211ENST00000523702 GPR152Q8TDT2 470 aa9.59□□□□□ -0.87
CPS1-211ENST00000523702 A0A1W2PNR3 127 aa9.58□□□□□ -0.88
CPS1-211ENST00000523702 TATP17735 454 aaPredicted RBP9.58□□□□□ -0.88
CPS1-211ENST00000523702 GAS2L1Q99501 681 aaPredicted RBP9.58□□□□□ -0.88
CPS1-211ENST00000523702 GGNBP2Q9H3C7 697 aa9.58□□□□□ -0.88
CPS1-211ENST00000523702 RUBCNLQ9H714 662 aa9.58□□□□□ -0.88
CPS1-211ENST00000523702 A0A1B0GTH6 734 aa9.57□□□□□ -0.88
CPS1-211ENST00000523702 TGFBR3LH3BV60 316 aa9.57□□□□□ -0.88
CPS1-211ENST00000523702 PDGFAP04085 211 aa9.57□□□□□ -0.88
CPS1-211ENST00000523702 THBS1P07996 1170 aa9.57□□□□□ -0.88
CPS1-211ENST00000523702 ERCC3P19447 782 aa9.57□□□□□ -0.88
CPS1-211ENST00000523702 RGL4Q8IZJ4 473 aa9.57□□□□□ -0.88
CPS1-211ENST00000523702 RBM47A0AV96 593 aaKnown RBP9.56□□□□□ -0.88
CPS1-211ENST00000523702 A6NHS1 94 aa9.56□□□□□ -0.88
CPS1-211ENST00000523702 NDUFB5O43674 189 aa9.56□□□□□ -0.88
CPS1-211ENST00000523702 GRNP28799 593 aaKnown RBP9.56□□□□□ -0.88
CPS1-211ENST00000523702 ZSCAN29Q8IWY8 852 aaPredicted RBP9.56□□□□□ -0.88
CPS1-211ENST00000523702 TMC1Q8TDI8 760 aa9.56□□□□□ -0.88
CPS1-211ENST00000523702 DYRK1BQ9Y463 629 aa9.56□□□□□ -0.88
CPS1-211ENST00000523702 GPR182O15218 404 aa9.55□□□□□ -0.88
CPS1-211ENST00000523702 MAN1A2O60476 641 aa9.55□□□□□ -0.88
CPS1-211ENST00000523702 ZNF16P17020 682 aaPredicted RBP9.55□□□□□ -0.88
CPS1-211ENST00000523702 MZF1P28698 734 aaPredicted RBP9.55□□□□□ -0.88
CPS1-211ENST00000523702 IDH3AP50213 366 aa9.55□□□□□ -0.88
CPS1-211ENST00000523702 DSC3Q14574 896 aa9.55□□□□□ -0.88
CPS1-211ENST00000523702 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.55□□□□□ -0.88
CPS1-211ENST00000523702 BTLAQ7Z6A9 289 aa9.55□□□□□ -0.88
CPS1-211ENST00000523702 FBXO33Q7Z6M2 555 aa9.55□□□□□ -0.88
CPS1-211ENST00000523702 NUDT16Q96DE0 195 aaKnown RBP9.55□□□□□ -0.88
CPS1-211ENST00000523702 FAM129BQ96TA1 746 aa9.55□□□□□ -0.88
CPS1-211ENST00000523702 BCL2L13Q9BXK5 485 aa9.55□□□□□ -0.88
CPS1-211ENST00000523702 LCE2BO14633 110 aa9.54□□□□□ -0.88
CPS1-211ENST00000523702 F11P03951 625 aa9.54□□□□□ -0.88
CPS1-211ENST00000523702 INPP5BP32019 993 aa9.54□□□□□ -0.88
CPS1-211ENST00000523702 GJD3Q8N144 294 aa9.54□□□□□ -0.88
CPS1-211ENST00000523702 GIPC2Q8TF65 315 aa9.54□□□□□ -0.88
CPS1-211ENST00000523702 CITED4Q96RK1 184 aa9.54□□□□□ -0.88
CPS1-211ENST00000523702 TREHO43280 583 aa9.53□□□□□ -0.88
CPS1-211ENST00000523702 P4HBP07237 508 aaKnown RBP9.53□□□□□ -0.88
CPS1-211ENST00000523702 PTSQ03393 145 aa9.53□□□□□ -0.88
CPS1-211ENST00000523702 LAPTM4AQ15012 233 aa9.53□□□□□ -0.88
CPS1-211ENST00000523702 ZCCHC2Q9C0B9 1178 aaKnown RBP9.53□□□□□ -0.88
CPS1-211ENST00000523702 NIF3L1Q9GZT8 377 aa9.53□□□□□ -0.88
CPS1-211ENST00000523702 CRISPLD1Q9H336 500 aa9.53□□□□□ -0.88
CPS1-211ENST00000523702 NEUROD4Q9HD90 331 aa9.53□□□□□ -0.88
CPS1-211ENST00000523702 ANKIB1Q9P2G1 1089 aa9.53□□□□□ -0.88
CPS1-211ENST00000523702 GMPR2Q9P2T1 348 aaKnown RBP9.53□□□□□ -0.88
CPS1-211ENST00000523702 SLC35F4A4IF30 521 aa9.52□□□□□ -0.89
CPS1-211ENST00000523702 IER5Q5VY09 327 aa9.52□□□□□ -0.89
CPS1-211ENST00000523702 SETDB2Q96T68 719 aa9.52□□□□□ -0.89
CPS1-211ENST00000523702 RNF19AQ9NV58 838 aa9.52□□□□□ -0.89
CPS1-211ENST00000523702 CUEDC1Q9NWM3 386 aaPredicted RBP9.52□□□□□ -0.89
CPS1-211ENST00000523702 HCN2Q9UL51 889 aa9.52□□□□□ -0.89
CPS1-211ENST00000523702 GPC6Q9Y625 555 aaPredicted RBP9.52□□□□□ -0.89
CPS1-211ENST00000523702 PLCB3Q01970 1234 aa9.51□□□□□ -0.89
CPS1-211ENST00000523702 EHHADHQ08426 723 aa9.51□□□□□ -0.89
CPS1-211ENST00000523702 C8orf34Q49A92 452 aa9.51□□□□□ -0.89
CPS1-211ENST00000523702 IRX2Q9BZI1 471 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms