RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 SLC16A10Q8TF71 515 aa10.95□□□□□ -0.66
CPNE3-206ENST00000523469 CDC14CA4D256 554 aa10.94□□□□□ -0.66
CPNE3-206ENST00000523469 C11orf91Q3C1V1 193 aa10.94□□□□□ -0.66
CPNE3-206ENST00000523469 FIGNL1Q6PIW4 674 aa10.94□□□□□ -0.66
CPNE3-206ENST00000523469 SV2AQ7L0J3 742 aa10.94□□□□□ -0.66
CPNE3-206ENST00000523469 VWA5B2Q8N398 1253 aa10.94□□□□□ -0.66
CPNE3-206ENST00000523469 SUSD3Q96L08 255 aa10.94□□□□□ -0.66
CPNE3-206ENST00000523469 SAP130Q9H0E3 1048 aa10.94□□□□□ -0.66
CPNE3-206ENST00000523469 LRFN2Q9ULH4 789 aa10.94□□□□□ -0.66
CPNE3-206ENST00000523469 KCNA1Q09470 495 aa10.93□□□□□ -0.66
CPNE3-206ENST00000523469 DGKZQ13574 1117 aa10.93□□□□□ -0.66
CPNE3-206ENST00000523469 FOXR1Q6PIV2 292 aa10.93□□□□□ -0.66
CPNE3-206ENST00000523469 LRRC69Q6ZNQ3 347 aa10.93□□□□□ -0.66
CPNE3-206ENST00000523469 TXNDC2Q86VQ3 553 aa10.93□□□□□ -0.66
CPNE3-206ENST00000523469 UBAP2LQ14157 1087 aaKnown RBP10.92□□□□□ -0.66
CPNE3-206ENST00000523469 SAMD5Q5TGI4 173 aa10.92□□□□□ -0.66
CPNE3-206ENST00000523469 CCER1Q8TC90 406 aaPredicted RBP10.92□□□□□ -0.66
CPNE3-206ENST00000523469 GTF3C2Q8WUA4 911 aaPredicted RBP10.92□□□□□ -0.66
CPNE3-206ENST00000523469 KLRG1Q96E93 195 aa10.92□□□□□ -0.66
CPNE3-206ENST00000523469 ZCCHC2Q9C0B9 1178 aaKnown RBP10.92□□□□□ -0.66
CPNE3-206ENST00000523469 KLK14Q9P0G3 267 aa10.92□□□□□ -0.66
CPNE3-206ENST00000523469 PATL2C9JE40 543 aaKnown RBP10.91□□□□□ -0.66
CPNE3-206ENST00000523469 VSIG8P0DPA2 414 aa10.91□□□□□ -0.66
CPNE3-206ENST00000523469 IER5Q5VY09 327 aa10.91□□□□□ -0.66
CPNE3-206ENST00000523469 KCTD17Q8N5Z5 321 aa10.91□□□□□ -0.66
CPNE3-206ENST00000523469 ZNF280CQ8ND82 737 aa10.91□□□□□ -0.66
CPNE3-206ENST00000523469 HELQQ8TDG4 1101 aa10.91□□□□□ -0.66
CPNE3-206ENST00000523469 GTPBP3Q969Y2 492 aaKnown RBP10.91□□□□□ -0.66
CPNE3-206ENST00000523469 HSH2DQ96JZ2 352 aa10.91□□□□□ -0.66
CPNE3-206ENST00000523469 TGFBR3LH3BV60 316 aa10.9□□□□□ -0.66
CPNE3-206ENST00000523469 BRD2P25440 801 aaKnown RBP10.9□□□□□ -0.66
CPNE3-206ENST00000523469 GNEQ9Y223 722 aaKnown RBP10.9□□□□□ -0.66
CPNE3-206ENST00000523469 PCDHGC4Q9Y5F7 938 aa10.9□□□□□ -0.66
CPNE3-206ENST00000523469 TNFRSF10BO14763 440 aa10.89□□□□□ -0.67
CPNE3-206ENST00000523469 ATXN7O15265 892 aaPredicted RBP10.89□□□□□ -0.67
CPNE3-206ENST00000523469 NFX1Q12986 1120 aaKnown RBP10.89□□□□□ -0.67
CPNE3-206ENST00000523469 IRF7Q92985 503 aa10.89□□□□□ -0.67
CPNE3-206ENST00000523469 ZNF775Q96BV0 537 aaPredicted RBP10.89□□□□□ -0.67
CPNE3-206ENST00000523469 IFT43Q96FT9 208 aa10.89□□□□□ -0.67
CPNE3-206ENST00000523469 TRERF1Q96PN7 1200 aa10.89□□□□□ -0.67
CPNE3-206ENST00000523469 EGFL7Q9UHF1 273 aa10.89□□□□□ -0.67
CPNE3-206ENST00000523469 BCS1LQ9Y276 419 aa10.89□□□□□ -0.67
CPNE3-206ENST00000523469 ABL1P00519 1130 aa10.88□□□□□ -0.67
CPNE3-206ENST00000523469 STIM2Q9P246 746 aa10.88□□□□□ -0.67
CPNE3-206ENST00000523469 PHF24Q9UPV7 400 aa10.88□□□□□ -0.67
CPNE3-206ENST00000523469 DNMT3AQ9Y6K1 912 aaPredicted RBP10.88□□□□□ -0.67
CPNE3-206ENST00000523469 FAM157BP0CG42 384 aa10.87□□□□□ -0.67
CPNE3-206ENST00000523469 SERPINB4P48594 390 aa10.87□□□□□ -0.67
CPNE3-206ENST00000523469 SF3B2Q13435 895 aaKnown RBP10.87□□□□□ -0.67
CPNE3-206ENST00000523469 BTLAQ7Z6A9 289 aa10.87□□□□□ -0.67
CPNE3-206ENST00000523469 AEBP1Q8IUX7 1158 aa10.87□□□□□ -0.67
CPNE3-206ENST00000523469 CFHR5Q9BXR6 569 aa10.87□□□□□ -0.67
CPNE3-206ENST00000523469 NDFIP2Q9NV92 336 aa10.87□□□□□ -0.67
CPNE3-206ENST00000523469 ABTB2Q8N961 1025 aa10.86□□□□□ -0.67
CPNE3-206ENST00000523469 CEP63Q96MT8 703 aa10.86□□□□□ -0.67
CPNE3-206ENST00000523469 DMGDHQ9UI17 866 aaKnown RBP10.86□□□□□ -0.67
CPNE3-206ENST00000523469 ATXN7L1Q9ULK2 861 aaPredicted RBP10.86□□□□□ -0.67
CPNE3-206ENST00000523469 ERBB4Q15303 1308 aa10.85□□□□□ -0.67
CPNE3-206ENST00000523469 BNIP3LO60238 219 aa10.85□□□□□ -0.67
CPNE3-206ENST00000523469 WFS1O76024 890 aa10.85□□□□□ -0.67
CPNE3-206ENST00000523469 FKBP4Q02790 459 aaKnown RBP eCLIP10.85□□□□□ -0.67
CPNE3-206ENST00000523469 TYRO3Q06418 890 aa10.85□□□□□ -0.67
CPNE3-206ENST00000523469 GPR161Q8N6U8 529 aaKnown RBP10.85□□□□□ -0.67
CPNE3-206ENST00000523469 GPR25O00155 361 aa10.84□□□□□ -0.67
CPNE3-206ENST00000523469 MICAL2O94851 1124 aa10.84□□□□□ -0.67
CPNE3-206ENST00000523469 TNP2Q05952 138 aa10.84□□□□□ -0.67
CPNE3-206ENST00000523469 ZNF211Q13398 564 aaPredicted RBP10.84□□□□□ -0.67
CPNE3-206ENST00000523469 LAMC2Q13753 1193 aa10.84□□□□□ -0.67
CPNE3-206ENST00000523469 TREML1Q86YW5 311 aa10.84□□□□□ -0.67
CPNE3-206ENST00000523469 ETFBKMTQ8IXQ9 262 aa10.84□□□□□ -0.67
CPNE3-206ENST00000523469 ABHD17AQ96GS6 310 aa10.84□□□□□ -0.67
CPNE3-206ENST00000523469 DCDC2BA2VCK2 349 aa10.83□□□□□ -0.68
CPNE3-206ENST00000523469 KHNYNO15037 678 aaKnown RBP10.83□□□□□ -0.68
CPNE3-206ENST00000523469 EFSO43281 561 aa10.83□□□□□ -0.68
CPNE3-206ENST00000523469 ICMTO60725 284 aa10.83□□□□□ -0.68
CPNE3-206ENST00000523469 MAPTP10636 758 aaKnown RBP10.83□□□□□ -0.68
CPNE3-206ENST00000523469 IVNS1ABPQ9Y6Y0 642 aa10.83□□□□□ -0.68
CPNE3-206ENST00000523469 NPR3P17342 541 aa10.82□□□□□ -0.68
CPNE3-206ENST00000523469 IDH3AP50213 366 aa10.82□□□□□ -0.68
CPNE3-206ENST00000523469 MTMR3Q13615 1198 aa10.82□□□□□ -0.68
CPNE3-206ENST00000523469 FAM26DQ5JW98 314 aa10.82□□□□□ -0.68
CPNE3-206ENST00000523469 TREML4Q6UXN2 200 aa10.82□□□□□ -0.68
CPNE3-206ENST00000523469 BRD7Q9NPI1 651 aa10.82□□□□□ -0.68
CPNE3-206ENST00000523469 ANO2Q9NQ90 1003 aa10.82□□□□□ -0.68
CPNE3-206ENST00000523469 FAM13AO94988 1023 aa10.81□□□□□ -0.68
CPNE3-206ENST00000523469 FGFR3P22607 806 aa10.81□□□□□ -0.68
CPNE3-206ENST00000523469 INPP5BP32019 993 aa10.81□□□□□ -0.68
CPNE3-206ENST00000523469 ARSDP51689 593 aa10.81□□□□□ -0.68
CPNE3-206ENST00000523469 H3BRB1 525 aa10.8□□□□□ -0.68
CPNE3-206ENST00000523469 EPB42P16452 691 aa10.8□□□□□ -0.68
CPNE3-206ENST00000523469 MPSTP25325 297 aa10.8□□□□□ -0.68
CPNE3-206ENST00000523469 KCNQ4P56696 695 aa10.8□□□□□ -0.68
CPNE3-206ENST00000523469 GAS6Q14393 721 aa10.8□□□□□ -0.68
CPNE3-206ENST00000523469 NOM1Q5C9Z4 860 aaKnown RBP10.8□□□□□ -0.68
CPNE3-206ENST00000523469 GLYCTKQ8IVS8 523 aa10.8□□□□□ -0.68
CPNE3-206ENST00000523469 COL25A1Q9BXS0 654 aaPredicted RBP10.8□□□□□ -0.68
CPNE3-206ENST00000523469 TUT1Q9H6E5 874 aaKnown RBP10.8□□□□□ -0.68
CPNE3-206ENST00000523469 MARK1Q9P0L2 795 aa10.8□□□□□ -0.68
CPNE3-206ENST00000523469 OPLAHO14841 1288 aa10.79□□□□□ -0.68
CPNE3-206ENST00000523469 ZBTB39O15060 712 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms