RNA–Protein interactions for RNA: ENST00000523359.1

SKP1-211, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-211ENST00000523359 M0R2N6 131 aa9.03□□□□□ -0.96
SKP1-211ENST00000523359 MTFR1Q15390 333 aa9.03□□□□□ -0.96
SKP1-211ENST00000523359 ARSJQ5FYB0 599 aaPredicted RBP9.03□□□□□ -0.96
SKP1-211ENST00000523359 AEBP1Q8IUX7 1158 aa9.03□□□□□ -0.96
SKP1-211ENST00000523359 ZNF295-AS1Q8N0V1 137 aa9.03□□□□□ -0.96
SKP1-211ENST00000523359 ZCCHC2Q9C0B9 1178 aaKnown RBP9.03□□□□□ -0.96
SKP1-211ENST00000523359 CABP1Q9NZU7 370 aa9.03□□□□□ -0.96
SKP1-211ENST00000523359 IQSEC3Q9UPP2 1182 aaPredicted RBP9.03□□□□□ -0.96
SKP1-211ENST00000523359 CDK2AP1O14519 115 aa9.02□□□□□ -0.97
SKP1-211ENST00000523359 BACH1O14867 736 aa9.02□□□□□ -0.97
SKP1-211ENST00000523359 PRMT3O60678 531 aa9.02□□□□□ -0.97
SKP1-211ENST00000523359 NBPF1Q3BBV0 1214 aa9.02□□□□□ -0.97
SKP1-211ENST00000523359 FIGNL1Q6PIW4 674 aa9.02□□□□□ -0.97
SKP1-211ENST00000523359 C1orf216Q8TAB5 229 aa9.02□□□□□ -0.97
SKP1-211ENST00000523359 GDF2Q9UK05 429 aaPredicted RBP9.02□□□□□ -0.97
SKP1-211ENST00000523359 A0A1W2PNR3 127 aa9.01□□□□□ -0.97
SKP1-211ENST00000523359 DCDC2BA2VCK2 349 aa9.01□□□□□ -0.97
SKP1-211ENST00000523359 SNRPNP63162 240 aaKnown RBP9.01□□□□□ -0.97
SKP1-211ENST00000523359 TNS4Q8IZW8 715 aa9.01□□□□□ -0.97
SKP1-211ENST00000523359 EDARADDQ8WWZ3 215 aa9.01□□□□□ -0.97
SKP1-211ENST00000523359 PRIMPOLQ96LW4 560 aa9.01□□□□□ -0.97
SKP1-211ENST00000523359 PCDHGC4Q9Y5F7 938 aa9.01□□□□□ -0.97
SKP1-211ENST00000523359 PARP3Q9Y6F1 533 aa9.01□□□□□ -0.97
SKP1-211ENST00000523359 BRD1O95696 1058 aa9□□□□□ -0.97
SKP1-211ENST00000523359 TATP17735 454 aaPredicted RBP9□□□□□ -0.97
SKP1-211ENST00000523359 ATP2B4P23634 1241 aa9□□□□□ -0.97
SKP1-211ENST00000523359 NLRP8Q86W28 1048 aa9□□□□□ -0.97
SKP1-211ENST00000523359 GOLGA6L1Q8N7Z2 621 aa9□□□□□ -0.97
SKP1-211ENST00000523359 DCAF5Q96JK2 942 aa9□□□□□ -0.97
SKP1-211ENST00000523359 GGA1Q9UJY5 639 aa9□□□□□ -0.97
SKP1-211ENST00000523359 ATXN7O15265 892 aaPredicted RBP8.99□□□□□ -0.97
SKP1-211ENST00000523359 TRIM26Q12899 539 aaPredicted RBP8.99□□□□□ -0.97
SKP1-211ENST00000523359 SUZ12Q15022 739 aaKnown RBP8.99□□□□□ -0.97
SKP1-211ENST00000523359 RRAGCQ9HB90 399 aa8.99□□□□□ -0.97
SKP1-211ENST00000523359 AMPD1P23109 780 aa8.98□□□□□ -0.97
SKP1-211ENST00000523359 SSFA2P28290 1259 aa8.98□□□□□ -0.97
SKP1-211ENST00000523359 EPHA4P54764 986 aa8.98□□□□□ -0.97
SKP1-211ENST00000523359 FOXK2Q01167 660 aa8.98□□□□□ -0.97
SKP1-211ENST00000523359 GAS2L2Q8NHY3 880 aa8.98□□□□□ -0.97
SKP1-211ENST00000523359 ZDHHC3Q9NYG2 299 aa8.98□□□□□ -0.97
SKP1-211ENST00000523359 SCHIP1Q9P0W5 487 aaPredicted RBP8.98□□□□□ -0.97
SKP1-211ENST00000523359 HCN2Q9UL51 889 aa8.98□□□□□ -0.97
SKP1-211ENST00000523359 KHNYNO15037 678 aaKnown RBP8.97□□□□□ -0.97
SKP1-211ENST00000523359 MAPTP10636 758 aaKnown RBP8.97□□□□□ -0.97
SKP1-211ENST00000523359 CD33P20138 364 aa8.97□□□□□ -0.97
SKP1-211ENST00000523359 TXLNAP40222 546 aa8.97□□□□□ -0.97
SKP1-211ENST00000523359 TNP2Q05952 138 aa8.97□□□□□ -0.97
SKP1-211ENST00000523359 OCLNQ16625 522 aa8.97□□□□□ -0.97
SKP1-211ENST00000523359 PLA2G4EQ3MJ16 856 aa8.97□□□□□ -0.97
SKP1-211ENST00000523359 TBCELQ5QJ74 424 aa8.97□□□□□ -0.97
SKP1-211ENST00000523359 B4GALNT3Q6L9W6 998 aa8.97□□□□□ -0.97
SKP1-211ENST00000523359 PHLDB3Q6NSJ2 640 aa8.97□□□□□ -0.97
SKP1-211ENST00000523359 BICDL1Q6ZP65 573 aa8.97□□□□□ -0.97
SKP1-211ENST00000523359 SLCO4C1Q6ZQN7 724 aa8.97□□□□□ -0.97
SKP1-211ENST00000523359 ZIC5Q96T25 663 aa8.97□□□□□ -0.97
SKP1-211ENST00000523359 TSPAN10Q9H1Z9 355 aaPredicted RBP8.97□□□□□ -0.97
SKP1-211ENST00000523359 CXXC1Q9P0U4 656 aaPredicted RBP8.97□□□□□ -0.97
SKP1-211ENST00000523359 GJA3Q9Y6H8 435 aa8.97□□□□□ -0.97
SKP1-211ENST00000523359 NEURL1BA8MQ27 555 aa8.96□□□□□ -0.98
SKP1-211ENST00000523359 IGHA1P01876 353 aa8.96□□□□□ -0.98
SKP1-211ENST00000523359 ZDHHC1Q8WTX9 485 aa8.96□□□□□ -0.98
SKP1-211ENST00000523359 SCG3Q8WXD2 468 aaKnown RBP8.96□□□□□ -0.98
SKP1-211ENST00000523359 MKL2Q9ULH7 1088 aa8.96□□□□□ -0.98
SKP1-211ENST00000523359 ARAFP10398 606 aa8.95□□□□□ -0.98
SKP1-211ENST00000523359 WEE1P30291 646 aa8.95□□□□□ -0.98
SKP1-211ENST00000523359 SCNN1AP37088 669 aa8.95□□□□□ -0.98
SKP1-211ENST00000523359 KCNA1Q09470 495 aa8.95□□□□□ -0.98
SKP1-211ENST00000523359 SLC9A9Q8IVB4 645 aa8.95□□□□□ -0.98
SKP1-211ENST00000523359 L3MBTL2Q969R5 705 aa8.95□□□□□ -0.98
SKP1-211ENST00000523359 ATAD2Q6PL18 1390 aa8.95□□□□□ -0.98
SKP1-211ENST00000523359 ITGB2P05107 769 aa8.94□□□□□ -0.98
SKP1-211ENST00000523359 IGFBP4P22692 258 aa8.94□□□□□ -0.98
SKP1-211ENST00000523359 CHMP7Q8WUX9 453 aaPredicted RBP8.94□□□□□ -0.98
SKP1-211ENST00000523359 ZBTB7CA1YPR0 619 aa8.93□□□□□ -0.98
SKP1-211ENST00000523359 C21orf2O43822 256 aa8.93□□□□□ -0.98
SKP1-211ENST00000523359 EPXP11678 715 aa8.93□□□□□ -0.98
SKP1-211ENST00000523359 NOS2P35228 1153 aa8.93□□□□□ -0.98
SKP1-211ENST00000523359 FKBP5Q13451 457 aaPredicted RBP8.93□□□□□ -0.98
SKP1-211ENST00000523359 TEAD4Q15561 434 aa8.93□□□□□ -0.98
SKP1-211ENST00000523359 ZNF232Q9UNY5 417 aa8.93□□□□□ -0.98
SKP1-211ENST00000523359 PPP1R12BO60237 982 aaPredicted RBP8.92□□□□□ -0.98
SKP1-211ENST00000523359 FAM157BP0CG42 384 aa8.92□□□□□ -0.98
SKP1-211ENST00000523359 HOXB4P17483 251 aaPredicted RBP8.92□□□□□ -0.98
SKP1-211ENST00000523359 SH3PXD2AQ5TCZ1 1133 aa8.92□□□□□ -0.98
SKP1-211ENST00000523359 MKNK1Q9BUB5 465 aa8.92□□□□□ -0.98
SKP1-211ENST00000523359 MSTNO14793 375 aa8.91□□□□□ -0.98
SKP1-211ENST00000523359 COL8A1P27658 744 aa8.91□□□□□ -0.98
SKP1-211ENST00000523359 FAM182BQ5T319 152 aa8.91□□□□□ -0.98
SKP1-211ENST00000523359 BTBD6Q96KE9 485 aa8.91□□□□□ -0.98
SKP1-211ENST00000523359 STRN4Q9NRL3 753 aa8.91□□□□□ -0.98
SKP1-211ENST00000523359 KLF15Q9UIH9 416 aa8.91□□□□□ -0.98
SKP1-211ENST00000523359 IVNS1ABPQ9Y6Y0 642 aa8.91□□□□□ -0.98
SKP1-211ENST00000523359 LOC100996750A0A140TA64 210 aa8.9□□□□□ -0.98
SKP1-211ENST00000523359 PATL2C9JE40 543 aaKnown RBP8.9□□□□□ -0.98
SKP1-211ENST00000523359 FOXO3O43524 673 aa8.9□□□□□ -0.98
SKP1-211ENST00000523359 ADH6P28332 368 aa8.9□□□□□ -0.98
SKP1-211ENST00000523359 PCBP4P57723 403 aaKnown RBP8.9□□□□□ -0.98
SKP1-211ENST00000523359 LRRC69Q6ZNQ3 347 aa8.9□□□□□ -0.98
SKP1-211ENST00000523359 TXNDC2Q86VQ3 553 aa8.9□□□□□ -0.98
SKP1-211ENST00000523359 SPOCK3Q9BQ16 436 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms