RNA–Protein interactions for RNA: ENST00000523315.1

EBF1-209, Transcript of early B cell factor 1, humanhuman

TSL 5

Gene EBF1, Length 490 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-209ENST00000523315 DDX21Q9NR30 783 aaKnown RBP eCLIP18.15■□□□□ 0.5
EBF1-209ENST00000523315 DBF4Q9UBU7 674 aaPredicted RBP18.15■□□□□ 0.5
EBF1-209ENST00000523315 PXDNLA1KZ92 1463 aa18.14■□□□□ 0.5
EBF1-209ENST00000523315 DDR1Q08345 913 aa18.14■□□□□ 0.49
EBF1-209ENST00000523315 USPL1Q5W0Q7 1092 aa18.14■□□□□ 0.49
EBF1-209ENST00000523315 DZIP3Q86Y13 1208 aaKnown RBP18.14■□□□□ 0.49
EBF1-209ENST00000523315 TSPYL6Q8N831 410 aa18.14■□□□□ 0.49
EBF1-209ENST00000523315 CHPF2Q9P2E5 772 aa18.14■□□□□ 0.49
EBF1-209ENST00000523315 NARFQ9UHQ1 456 aa18.14■□□□□ 0.49
EBF1-209ENST00000523315 DPEP1P16444 411 aa18.13■□□□□ 0.49
EBF1-209ENST00000523315 CDCA7LQ96GN5 454 aa18.13■□□□□ 0.49
EBF1-209ENST00000523315 HYPKQ9NX55 129 aa18.13■□□□□ 0.49
EBF1-209ENST00000523315 ZNF652Q9Y2D9 606 aa18.13■□□□□ 0.49
EBF1-209ENST00000523315 C10orf71Q711Q0 1435 aa18.13■□□□□ 0.49
EBF1-209ENST00000523315 SCN7AQ01118 1682 aa18.12■□□□□ 0.49
EBF1-209ENST00000523315 TBC1D2BQ9UPU7 963 aa18.11■□□□□ 0.49
EBF1-209ENST00000523315 BCS1LQ9Y276 419 aa18.11■□□□□ 0.49
EBF1-209ENST00000523315 CT47B1P0C2W7 299 aaPredicted RBP18.1■□□□□ 0.49
EBF1-209ENST00000523315 TGFB2P61812 414 aa18.1■□□□□ 0.49
EBF1-209ENST00000523315 RGL2O15211 777 aa18.09■□□□□ 0.49
EBF1-209ENST00000523315 VAMP4O75379 141 aa18.09■□□□□ 0.49
EBF1-209ENST00000523315 ANXA1P04083 346 aa18.09■□□□□ 0.49
EBF1-209ENST00000523315 PDIA6Q15084 440 aa18.09■□□□□ 0.49
EBF1-209ENST00000523315 PROSER3Q2NL68 480 aa18.09■□□□□ 0.49
EBF1-209ENST00000523315 TRMT2AQ8IZ69 625 aaKnown RBP18.09■□□□□ 0.49
EBF1-209ENST00000523315 ZNF428Q96B54 188 aa18.09■□□□□ 0.49
EBF1-209ENST00000523315 BCORQ6W2J9 1755 aa18.09■□□□□ 0.49
EBF1-209ENST00000523315 ATP10DQ9P241 1426 aa18.08■□□□□ 0.49
EBF1-209ENST00000523315 MAP3K15Q6ZN16 1313 aa18.08■□□□□ 0.49
EBF1-209ENST00000523315 POLRMTO00411 1230 aaKnown RBP18.08■□□□□ 0.48
EBF1-209ENST00000523315 CAMTA2O94983 1202 aa18.08■□□□□ 0.48
EBF1-209ENST00000523315 TM4SF1P30408 202 aa18.08■□□□□ 0.48
EBF1-209ENST00000523315 AIMP1Q12904 312 aaKnown RBP18.08■□□□□ 0.48
EBF1-209ENST00000523315 ZNF526Q8TF50 670 aaPredicted RBP18.08■□□□□ 0.48
EBF1-209ENST00000523315 XAGE3Q8WTP9 111 aa18.08■□□□□ 0.48
EBF1-209ENST00000523315 YTHDC1Q96MU7 727 aaKnown RBP18.08■□□□□ 0.48
EBF1-209ENST00000523315 BCL2L12Q9HB09 334 aa18.08■□□□□ 0.48
EBF1-209ENST00000523315 N4BP2Q86UW6 1770 aaPredicted RBP18.07■□□□□ 0.48
EBF1-209ENST00000523315 ERVV-1B6SEH8 477 aa18.07■□□□□ 0.48
EBF1-209ENST00000523315 DDX58O95786 925 aaKnown RBP18.07■□□□□ 0.48
EBF1-209ENST00000523315 CHRNA5P30532 468 aa18.07■□□□□ 0.48
EBF1-209ENST00000523315 NFIXQ14938 502 aa18.07■□□□□ 0.48
EBF1-209ENST00000523315 CLEC4GQ6UXB4 293 aa18.07■□□□□ 0.48
EBF1-209ENST00000523315 COPS6Q7L5N1 327 aa18.07■□□□□ 0.48
EBF1-209ENST00000523315 KIAA1551Q9HCM1 1747 aa18.06■□□□□ 0.48
EBF1-209ENST00000523315 KCNA3P22001 575 aa18.06■□□□□ 0.48
EBF1-209ENST00000523315 BICDL1Q6ZP65 573 aa18.06■□□□□ 0.48
EBF1-209ENST00000523315 TTLL7Q6ZT98 887 aa18.06■□□□□ 0.48
EBF1-209ENST00000523315 ZBTB3Q9H5J0 574 aa18.06■□□□□ 0.48
EBF1-209ENST00000523315 TCERG1O14776 1098 aaKnown RBP18.05■□□□□ 0.48
EBF1-209ENST00000523315 SLC4A2P04920 1241 aa18.05■□□□□ 0.48
EBF1-209ENST00000523315 LRP10Q7Z4F1 713 aa18.05■□□□□ 0.48
EBF1-209ENST00000523315 KIF13BQ9NQT8 1826 aa18.05■□□□□ 0.48
EBF1-209ENST00000523315 C1QTNF8P60827 252 aa18.04■□□□□ 0.48
EBF1-209ENST00000523315 HSP90AB3PQ58FF7 597 aa18.04■□□□□ 0.48
EBF1-209ENST00000523315 ARHGAP27Q6ZUM4 889 aa18.04■□□□□ 0.48
EBF1-209ENST00000523315 PLBD2Q8NHP8 589 aa18.03■□□□□ 0.48
EBF1-209ENST00000523315 SETDB2Q96T68 719 aa18.03■□□□□ 0.48
EBF1-209ENST00000523315 ADCY9O60503 1353 aa18.03■□□□□ 0.48
EBF1-209ENST00000523315 CARMIL3Q8ND23 1372 aa18.03■□□□□ 0.48
EBF1-209ENST00000523315 NPHP1O15259 732 aa18.02■□□□□ 0.48
EBF1-209ENST00000523315 SERPINB2P05120 415 aa18.02■□□□□ 0.48
EBF1-209ENST00000523315 ALDH1L2Q3SY69 923 aa18.02■□□□□ 0.48
EBF1-209ENST00000523315 GIGYF2Q6Y7W6 1299 aaKnown RBP18.02■□□□□ 0.48
EBF1-209ENST00000523315 ANKRD13DQ6ZTN6 518 aa18.02■□□□□ 0.48
EBF1-209ENST00000523315 RIC3Q7Z5B4 369 aa18.02■□□□□ 0.48
EBF1-209ENST00000523315 PHAXQ9H814 394 aaKnown RBP18.02■□□□□ 0.48
EBF1-209ENST00000523315 SMC4Q9NTJ3 1288 aa18.02■□□□□ 0.48
EBF1-209ENST00000523315 PIM2Q9P1W9 311 aa18.02■□□□□ 0.48
EBF1-209ENST00000523315 CACNA1FO60840 1977 aa18.02■□□□□ 0.47
EBF1-209ENST00000523315 FLIIQ13045 1269 aa18.01■□□□□ 0.47
EBF1-209ENST00000523315 TBC1D9BQ66K14 1250 aa18.01■□□□□ 0.47
EBF1-209ENST00000523315 GPBP1L1Q9HC44 474 aaPredicted RBP18.01■□□□□ 0.47
EBF1-209ENST00000523315 NIP7Q9Y221 180 aaKnown RBP eCLIP18.01■□□□□ 0.47
EBF1-209ENST00000523315 FKBP5Q13451 457 aaPredicted RBP18■□□□□ 0.47
EBF1-209ENST00000523315 DALRD3Q5D0E6 543 aaKnown RBP18■□□□□ 0.47
EBF1-209ENST00000523315 CCDC24Q8N4L8 307 aa18■□□□□ 0.47
EBF1-209ENST00000523315 HLFQ16534 295 aa17.99■□□□□ 0.47
EBF1-209ENST00000523315 NEXNQ0ZGT2 675 aa17.98■□□□□ 0.47
EBF1-209ENST00000523315 PARP10Q53GL7 1025 aa17.98■□□□□ 0.47
EBF1-209ENST00000523315 SSH1Q8WYL5 1049 aa17.98■□□□□ 0.47
EBF1-209ENST00000523315 ARFGEF2Q9Y6D5 1785 aa17.97■□□□□ 0.47
EBF1-209ENST00000523315 GPTP24298 496 aa17.97■□□□□ 0.47
EBF1-209ENST00000523315 KSR2Q6VAB6 950 aa17.97■□□□□ 0.47
EBF1-209ENST00000523315 G2E3Q7L622 706 aa17.97■□□□□ 0.47
EBF1-209ENST00000523315 NBPF5PQ86XG9 351 aaPredicted RBP17.97■□□□□ 0.47
EBF1-209ENST00000523315 BCL2L13Q9BXK5 485 aa17.97■□□□□ 0.47
EBF1-209ENST00000523315 NYXQ9GZU5 481 aa17.97■□□□□ 0.47
EBF1-209ENST00000523315 NUP98P52948 1817 aa17.97■□□□□ 0.47
EBF1-209ENST00000523315 KIF16BQ96L93 1317 aa17.97■□□□□ 0.47
EBF1-209ENST00000523315 ANKRD36CQ5JPF3 1778 aa17.96■□□□□ 0.47
EBF1-209ENST00000523315 IBTKQ9P2D0 1353 aaPredicted RBP17.96■□□□□ 0.47
EBF1-209ENST00000523315 ST5P78524 1137 aa17.96■□□□□ 0.47
EBF1-209ENST00000523315 TCIRG1Q13488 830 aa17.96■□□□□ 0.47
EBF1-209ENST00000523315 PPP1R42Q7Z4L9 355 aa17.96■□□□□ 0.47
EBF1-209ENST00000523315 MRPL50Q8N5N7 158 aaKnown RBP17.96■□□□□ 0.47
EBF1-209ENST00000523315 CNBD1Q8NA66 436 aa17.96■□□□□ 0.47
EBF1-209ENST00000523315 MAP3K2Q9Y2U5 619 aa17.96■□□□□ 0.47
EBF1-209ENST00000523315 PTPRCP08575 1304 aa17.96■□□□□ 0.46
EBF1-209ENST00000523315 PI4KAP2A4QPH2 592 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms