RNA–Protein interactions for RNA: ENST00000523208.5

CD74-209, Transcript of CD74 molecule, humanhuman

TSL 5

Gene CD74, Length 767 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD74-209ENST00000523208 XAGE3Q8WTP9 111 aa14.84□□□□□ -0.03
CD74-209ENST00000523208 ZBTB3Q9H5J0 574 aa14.84□□□□□ -0.03
CD74-209ENST00000523208 TBC1D2BQ9UPU7 963 aa14.84□□□□□ -0.03
CD74-209ENST00000523208 TRAPPC3LQ5T215 181 aa14.83□□□□□ -0.04
CD74-209ENST00000523208 LRP10Q7Z4F1 713 aa14.83□□□□□ -0.04
CD74-209ENST00000523208 ARHGEF1Q92888 912 aaKnown RBP14.83□□□□□ -0.04
CD74-209ENST00000523208 PHAXQ9H814 394 aaKnown RBP14.83□□□□□ -0.04
CD74-209ENST00000523208 BRCA1P38398 1863 aaKnown RBP14.82□□□□□ -0.04
CD74-209ENST00000523208 A0A087WZG4 1122 aa14.82□□□□□ -0.04
CD74-209ENST00000523208 ZBTB7AO95365 584 aa14.82□□□□□ -0.04
CD74-209ENST00000523208 CT47B1P0C2W7 299 aaPredicted RBP14.82□□□□□ -0.04
CD74-209ENST00000523208 USPL1Q5W0Q7 1092 aa14.82□□□□□ -0.04
CD74-209ENST00000523208 FLAD1Q8NFF5 587 aa14.82□□□□□ -0.04
CD74-209ENST00000523208 SSH1Q8WYL5 1049 aa14.82□□□□□ -0.04
CD74-209ENST00000523208 ATP10DQ9P241 1426 aa14.82□□□□□ -0.04
CD74-209ENST00000523208 ZPR1O75312 459 aa14.81□□□□□ -0.04
CD74-209ENST00000523208 CAMTA2O94983 1202 aa14.81□□□□□ -0.04
CD74-209ENST00000523208 FLIIQ13045 1269 aa14.81□□□□□ -0.04
CD74-209ENST00000523208 G2E3Q7L622 706 aa14.81□□□□□ -0.04
CD74-209ENST00000523208 HYPKQ9NX55 129 aa14.81□□□□□ -0.04
CD74-209ENST00000523208 MAP3K15Q6ZN16 1313 aa14.81□□□□□ -0.04
CD74-209ENST00000523208 KIF16BQ96L93 1317 aa14.81□□□□□ -0.04
CD74-209ENST00000523208 ADCY9O60503 1353 aa14.81□□□□□ -0.04
CD74-209ENST00000523208 SLC4A2P04920 1241 aa14.8□□□□□ -0.04
CD74-209ENST00000523208 FKBP5Q13451 457 aaPredicted RBP14.8□□□□□ -0.04
CD74-209ENST00000523208 COPS6Q7L5N1 327 aa14.8□□□□□ -0.04
CD74-209ENST00000523208 CHMP4AQ9BY43 222 aa14.8□□□□□ -0.04
CD74-209ENST00000523208 NARFQ9UHQ1 456 aa14.8□□□□□ -0.04
CD74-209ENST00000523208 RARSP54136 660 aaKnown RBP14.79□□□□□ -0.04
CD74-209ENST00000523208 ALDH1L2Q3SY69 923 aa14.79□□□□□ -0.04
CD74-209ENST00000523208 BICDL1Q6ZP65 573 aa14.79□□□□□ -0.04
CD74-209ENST00000523208 MRPL50Q8N5N7 158 aaKnown RBP14.79□□□□□ -0.04
CD74-209ENST00000523208 GYS1P13807 737 aa14.78□□□□□ -0.04
CD74-209ENST00000523208 ZNF428Q96B54 188 aa14.78□□□□□ -0.04
CD74-209ENST00000523208 BCL2L12Q9HB09 334 aa14.78□□□□□ -0.04
CD74-209ENST00000523208 ZNF652Q9Y2D9 606 aa14.78□□□□□ -0.04
CD74-209ENST00000523208 CARMIL3Q8ND23 1372 aa14.77□□□□□ -0.04
CD74-209ENST00000523208 DDX58O95786 925 aaKnown RBP14.77□□□□□ -0.05
CD74-209ENST00000523208 GPTP24298 496 aa14.77□□□□□ -0.05
CD74-209ENST00000523208 FKBP8Q14318 412 aa14.77□□□□□ -0.05
CD74-209ENST00000523208 HLFQ16534 295 aa14.77□□□□□ -0.05
CD74-209ENST00000523208 MTFR1LQ9H019 292 aa14.77□□□□□ -0.05
CD74-209ENST00000523208 A0A1B0GUL6 1792 aa14.77□□□□□ -0.05
CD74-209ENST00000523208 TAF1P21675 1872 aa14.76□□□□□ -0.05
CD74-209ENST00000523208 BCAR3O75815 825 aa14.76□□□□□ -0.05
CD74-209ENST00000523208 RIC3Q7Z5B4 369 aa14.76□□□□□ -0.05
CD74-209ENST00000523208 PLBD2Q8NHP8 589 aa14.76□□□□□ -0.05
CD74-209ENST00000523208 FRAT1Q92837 279 aaPredicted RBP14.76□□□□□ -0.05
CD74-209ENST00000523208 RCAN3Q9UKA8 241 aa14.76□□□□□ -0.05
CD74-209ENST00000523208 ATF5Q9Y2D1 282 aaPredicted RBP14.76□□□□□ -0.05
CD74-209ENST00000523208 MAP3K2Q9Y2U5 619 aa14.76□□□□□ -0.05
CD74-209ENST00000523208 C10orf71Q711Q0 1435 aa14.75□□□□□ -0.05
CD74-209ENST00000523208 UBN2Q6ZU65 1347 aa14.75□□□□□ -0.05
CD74-209ENST00000523208 F6X3S4 739 aa14.75□□□□□ -0.05
CD74-209ENST00000523208 TBC1D9BQ66K14 1250 aa14.75□□□□□ -0.05
CD74-209ENST00000523208 MYD88Q99836 296 aa14.75□□□□□ -0.05
CD74-209ENST00000523208 PTPRCP08575 1304 aa14.74□□□□□ -0.05
CD74-209ENST00000523208 FAM177BA6PVY3 158 aa14.74□□□□□ -0.05
CD74-209ENST00000523208 MMP10P09238 476 aa14.74□□□□□ -0.05
CD74-209ENST00000523208 DDR1Q08345 913 aa14.74□□□□□ -0.05
CD74-209ENST00000523208 KLHL34Q8N239 644 aa14.74□□□□□ -0.05
CD74-209ENST00000523208 SLC16A10Q8TF71 515 aa14.74□□□□□ -0.05
CD74-209ENST00000523208 NIP7Q9Y221 180 aaKnown RBP eCLIP14.74□□□□□ -0.05
CD74-209ENST00000523208 ABCC12Q96J65 1359 aa14.73□□□□□ -0.05
CD74-209ENST00000523208 PI4KAP2A4QPH2 592 aa14.73□□□□□ -0.05
CD74-209ENST00000523208 ERVV-1B6SEH8 477 aa14.73□□□□□ -0.05
CD74-209ENST00000523208 NPHP1O15259 732 aa14.73□□□□□ -0.05
CD74-209ENST00000523208 NFIXQ14938 502 aa14.73□□□□□ -0.05
CD74-209ENST00000523208 SLC4A10Q6U841 1118 aa14.73□□□□□ -0.05
CD74-209ENST00000523208 GIGYF2Q6Y7W6 1299 aaKnown RBP14.73□□□□□ -0.05
CD74-209ENST00000523208 ANKRD13DQ6ZTN6 518 aa14.73□□□□□ -0.05
CD74-209ENST00000523208 PI4KAP1Q8N8J0 262 aa14.73□□□□□ -0.05
CD74-209ENST00000523208 DNAAF4Q8WXU2 420 aa14.73□□□□□ -0.05
CD74-209ENST00000523208 TNNQ9UQP3 1299 aa14.73□□□□□ -0.05
CD74-209ENST00000523208 IBTKQ9P2D0 1353 aaPredicted RBP14.73□□□□□ -0.05
CD74-209ENST00000523208 ARFGEF1Q9Y6D6 1849 aa14.72□□□□□ -0.05
CD74-209ENST00000523208 ATP5J2-PTCD1G3V325 749 aa14.72□□□□□ -0.05
CD74-209ENST00000523208 POLD1P28340 1107 aa14.72□□□□□ -0.05
CD74-209ENST00000523208 HSP90AB3PQ58FF7 597 aa14.72□□□□□ -0.05
CD74-209ENST00000523208 KSR2Q6VAB6 950 aa14.72□□□□□ -0.05
CD74-209ENST00000523208 NOB1Q9ULX3 412 aaKnown RBP14.72□□□□□ -0.05
CD74-209ENST00000523208 NEXNQ0ZGT2 675 aa14.71□□□□□ -0.05
CD74-209ENST00000523208 SPON1Q9HCB6 807 aa14.71□□□□□ -0.05
CD74-209ENST00000523208 LRRC37AA6NMS7 1700 aa14.7□□□□□ -0.06
CD74-209ENST00000523208 POLRMTO00411 1230 aaKnown RBP14.7□□□□□ -0.06
CD74-209ENST00000523208 TRIM27P14373 513 aa14.7□□□□□ -0.06
CD74-209ENST00000523208 CWF19L2Q2TBE0 894 aaKnown RBP14.7□□□□□ -0.06
CD74-209ENST00000523208 NLGN1Q8N2Q7 840 aa14.7□□□□□ -0.06
CD74-209ENST00000523208 CLUAP1Q96AJ1 413 aa14.7□□□□□ -0.06
CD74-209ENST00000523208 METTL22Q9BUU2 404 aaPredicted RBP14.7□□□□□ -0.06
CD74-209ENST00000523208 API5Q9BZZ5 524 aaKnown RBP14.7□□□□□ -0.06
CD74-209ENST00000523208 PARP3Q9Y6F1 533 aa14.7□□□□□ -0.06
CD74-209ENST00000523208 ABCC4O15439 1325 aa14.69□□□□□ -0.06
CD74-209ENST00000523208 TCIRG1Q13488 830 aa14.69□□□□□ -0.06
CD74-209ENST00000523208 ZKSCAN2Q63HK3 967 aa14.69□□□□□ -0.06
CD74-209ENST00000523208 CLEC4GQ6UXB4 293 aa14.69□□□□□ -0.06
CD74-209ENST00000523208 NBPF5PQ86XG9 351 aaPredicted RBP14.69□□□□□ -0.06
CD74-209ENST00000523208 CCDC24Q8N4L8 307 aa14.69□□□□□ -0.06
CD74-209ENST00000523208 CNBD1Q8NA66 436 aa14.69□□□□□ -0.06
CD74-209ENST00000523208 SETDB2Q96T68 719 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms