RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 RUNDC1Q96C34 613 aa14.31□□□□□ -0.12
PVT1-216ENST00000523068 TSPYL4Q9UJ04 414 aa14.31□□□□□ -0.12
PVT1-216ENST00000523068 COL11A2P13942 1736 aaPredicted RBP14.31□□□□□ -0.12
PVT1-216ENST00000523068 CCDC88AQ3V6T2 1871 aa14.31□□□□□ -0.12
PVT1-216ENST00000523068 ARFGEF2Q9Y6D5 1785 aa14.3□□□□□ -0.12
PVT1-216ENST00000523068 C9orf131Q5VYM1 1079 aa14.29□□□□□ -0.12
PVT1-216ENST00000523068 NBPF5PQ86XG9 351 aaPredicted RBP14.29□□□□□ -0.12
PVT1-216ENST00000523068 CCDC146Q8IYE0 955 aa14.29□□□□□ -0.12
PVT1-216ENST00000523068 ZNF316A6NFI3 1004 aaPredicted RBP14.28□□□□□ -0.12
PVT1-216ENST00000523068 ERBB4Q15303 1308 aa14.28□□□□□ -0.12
PVT1-216ENST00000523068 NEUROD2Q15784 382 aa14.28□□□□□ -0.12
PVT1-216ENST00000523068 ZNF622Q969S3 477 aaKnown RBP eCLIP14.28□□□□□ -0.12
PVT1-216ENST00000523068 ADAMTS8Q9UP79 889 aa14.28□□□□□ -0.12
PVT1-216ENST00000523068 RRP7AQ9Y3A4 280 aaKnown RBP14.28□□□□□ -0.12
PVT1-216ENST00000523068 ERVV-1B6SEH8 477 aa14.27□□□□□ -0.13
PVT1-216ENST00000523068 TPTE2Q6XPS3 522 aa14.27□□□□□ -0.13
PVT1-216ENST00000523068 KIF6Q6ZMV9 814 aa14.27□□□□□ -0.13
PVT1-216ENST00000523068 RNF181Q9P0P0 153 aa14.27□□□□□ -0.13
PVT1-216ENST00000523068 NIP7Q9Y221 180 aaKnown RBP eCLIP14.27□□□□□ -0.13
PVT1-216ENST00000523068 FER1L6Q2WGJ9 1857 aa14.27□□□□□ -0.13
PVT1-216ENST00000523068 DICER1Q9UPY3 1922 aaKnown RBP14.26□□□□□ -0.13
PVT1-216ENST00000523068 SENP3-EIF4A1A0A087X0R7 540 aa14.26□□□□□ -0.13
PVT1-216ENST00000523068 CCDC24Q8N4L8 307 aa14.26□□□□□ -0.13
PVT1-216ENST00000523068 NGEFQ8N5V2 710 aa14.26□□□□□ -0.13
PVT1-216ENST00000523068 CNKSR1Q969H4 720 aa14.26□□□□□ -0.13
PVT1-216ENST00000523068 SLX4Q8IY92 1834 aa14.25□□□□□ -0.13
PVT1-216ENST00000523068 MAP3K15Q6ZN16 1313 aa14.25□□□□□ -0.13
PVT1-216ENST00000523068 ZC3H4Q9UPT8 1303 aaKnown RBP14.25□□□□□ -0.13
PVT1-216ENST00000523068 TIAM2Q8IVF5 1701 aa14.25□□□□□ -0.13
PVT1-216ENST00000523068 MYL6BP14649 208 aa14.25□□□□□ -0.13
PVT1-216ENST00000523068 LMNB1P20700 586 aa14.25□□□□□ -0.13
PVT1-216ENST00000523068 STYK1Q6J9G0 422 aa14.25□□□□□ -0.13
PVT1-216ENST00000523068 MASTLQ96GX5 879 aa14.25□□□□□ -0.13
PVT1-216ENST00000523068 NYXQ9GZU5 481 aa14.25□□□□□ -0.13
PVT1-216ENST00000523068 TNRC6CQ9HCJ0 1690 aaKnown RBP14.25□□□□□ -0.13
PVT1-216ENST00000523068 KDM2BQ8NHM5 1336 aa14.24□□□□□ -0.13
PVT1-216ENST00000523068 SRGNP10124 158 aa14.24□□□□□ -0.13
PVT1-216ENST00000523068 GTF2E1P29083 439 aaPredicted RBP14.24□□□□□ -0.13
PVT1-216ENST00000523068 HLFQ16534 295 aa14.24□□□□□ -0.13
PVT1-216ENST00000523068 TRIM35Q9UPQ4 493 aa14.24□□□□□ -0.13
PVT1-216ENST00000523068 KIF3CO14782 793 aa14.23□□□□□ -0.13
PVT1-216ENST00000523068 EIF2S2P20042 333 aaKnown RBP14.23□□□□□ -0.13
PVT1-216ENST00000523068 RASSF7Q02833 373 aa14.23□□□□□ -0.13
PVT1-216ENST00000523068 SOGA3Q5TF21 947 aa14.23□□□□□ -0.13
PVT1-216ENST00000523068 ANKRD36CQ5JPF3 1778 aa14.23□□□□□ -0.13
PVT1-216ENST00000523068 FAM177BA6PVY3 158 aa14.22□□□□□ -0.13
PVT1-216ENST00000523068 CHL1O00533 1208 aa14.22□□□□□ -0.13
PVT1-216ENST00000523068 C21orf2O43822 256 aa14.22□□□□□ -0.13
PVT1-216ENST00000523068 NPR1P16066 1061 aa14.22□□□□□ -0.13
PVT1-216ENST00000523068 TTLL7Q6ZT98 887 aa14.22□□□□□ -0.13
PVT1-216ENST00000523068 LAS1LQ9Y4W2 734 aaKnown RBP14.22□□□□□ -0.13
PVT1-216ENST00000523068 IBTKQ9P2D0 1353 aaPredicted RBP14.22□□□□□ -0.13
PVT1-216ENST00000523068 KLRG2A4D1S0 409 aaPredicted RBP14.21□□□□□ -0.13
PVT1-216ENST00000523068 PRPF40BQ6NWY9 871 aaKnown RBP14.21□□□□□ -0.13
PVT1-216ENST00000523068 ZBTB3Q9H5J0 574 aa14.21□□□□□ -0.13
PVT1-216ENST00000523068 NFKBIEO00221 500 aa14.2□□□□□ -0.14
PVT1-216ENST00000523068 TOMM70O94826 608 aa14.2□□□□□ -0.14
PVT1-216ENST00000523068 ALDH1B1P30837 517 aa14.2□□□□□ -0.14
PVT1-216ENST00000523068 CALD1Q05682 793 aaKnown RBP14.2□□□□□ -0.14
PVT1-216ENST00000523068 GIGYF2Q6Y7W6 1299 aaKnown RBP14.2□□□□□ -0.14
PVT1-216ENST00000523068 C16orf71Q8IYS4 520 aaPredicted RBP14.2□□□□□ -0.14
PVT1-216ENST00000523068 CFAP44Q96MT7 982 aa14.2□□□□□ -0.14
PVT1-216ENST00000523068 ZNF219Q9P2Y4 722 aaPredicted RBP14.2□□□□□ -0.14
PVT1-216ENST00000523068 LTBP3Q9NS15 1303 aa14.19□□□□□ -0.14
PVT1-216ENST00000523068 RIC1Q4ADV7 1423 aa14.19□□□□□ -0.14
PVT1-216ENST00000523068 HOXB7P09629 217 aa14.19□□□□□ -0.14
PVT1-216ENST00000523068 PDIA6Q15084 440 aa14.19□□□□□ -0.14
PVT1-216ENST00000523068 PPP1R42Q7Z4L9 355 aa14.19□□□□□ -0.14
PVT1-216ENST00000523068 ZNF34Q8IZ26 560 aa14.19□□□□□ -0.14
PVT1-216ENST00000523068 TAOK3Q9H2K8 898 aa14.19□□□□□ -0.14
PVT1-216ENST00000523068 NMRK2Q9NPI5 230 aa14.19□□□□□ -0.14
PVT1-216ENST00000523068 APAF1O14727 1248 aa14.18□□□□□ -0.14
PVT1-216ENST00000523068 HSPA6P17066 643 aa14.18□□□□□ -0.14
PVT1-216ENST00000523068 GPTP24298 496 aa14.18□□□□□ -0.14
PVT1-216ENST00000523068 PARP10Q53GL7 1025 aa14.18□□□□□ -0.14
PVT1-216ENST00000523068 HSP90AB3PQ58FF7 597 aa14.18□□□□□ -0.14
PVT1-216ENST00000523068 LRP10Q7Z4F1 713 aa14.18□□□□□ -0.14
PVT1-216ENST00000523068 DDX21Q9NR30 783 aaKnown RBP eCLIP14.18□□□□□ -0.14
PVT1-216ENST00000523068 UBN2Q6ZU65 1347 aa14.17□□□□□ -0.14
PVT1-216ENST00000523068 GLTPD2A6NH11 291 aa14.17□□□□□ -0.14
PVT1-216ENST00000523068 PRELPP51888 382 aa14.17□□□□□ -0.14
PVT1-216ENST00000523068 PROSER3Q2NL68 480 aa14.17□□□□□ -0.14
PVT1-216ENST00000523068 ERFEQ4G0M1 354 aa14.17□□□□□ -0.14
PVT1-216ENST00000523068 CCDC93Q567U6 631 aa14.17□□□□□ -0.14
PVT1-216ENST00000523068 DPY19L2Q6NUT2 758 aa14.17□□□□□ -0.14
PVT1-216ENST00000523068 NUTM1Q86Y26 1132 aa14.17□□□□□ -0.14
PVT1-216ENST00000523068 NECTIN2Q92692 538 aa14.17□□□□□ -0.14
PVT1-216ENST00000523068 ANXA1P04083 346 aa14.16□□□□□ -0.14
PVT1-216ENST00000523068 GNAI1P63096 354 aa14.16□□□□□ -0.14
PVT1-216ENST00000523068 CRY2Q49AN0 593 aa14.16□□□□□ -0.14
PVT1-216ENST00000523068 HDGFL1Q5TGJ6 251 aa14.16□□□□□ -0.14
PVT1-216ENST00000523068 SUSD4Q5VX71 490 aa14.16□□□□□ -0.14
PVT1-216ENST00000523068 COPS6Q7L5N1 327 aa14.16□□□□□ -0.14
PVT1-216ENST00000523068 RBM46Q8TBY0 533 aaKnown RBP14.16□□□□□ -0.14
PVT1-216ENST00000523068 RPGRQ92834 1020 aaKnown RBP14.16□□□□□ -0.14
PVT1-216ENST00000523068 RRAGCQ9HB90 399 aa14.16□□□□□ -0.14
PVT1-216ENST00000523068 IFT57Q9NWB7 429 aa14.16□□□□□ -0.14
PVT1-216ENST00000523068 ABCC12Q96J65 1359 aa14.16□□□□□ -0.14
PVT1-216ENST00000523068 RNF123Q5XPI4 1314 aa14.15□□□□□ -0.14
PVT1-216ENST00000523068 ANP32CO43423 234 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms