RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 BABAM1Q9NWV8 329 aa24.53■■□□□ 1.52
SPIDR-220ENST00000522900 NPHP1O15259 732 aa24.52■■□□□ 1.52
SPIDR-220ENST00000522900 NBPF5PQ86XG9 351 aaPredicted RBP24.52■■□□□ 1.52
SPIDR-220ENST00000522900 ZNF622Q969S3 477 aaKnown RBP eCLIP24.52■■□□□ 1.52
SPIDR-220ENST00000522900 NIP7Q9Y221 180 aaKnown RBP eCLIP24.52■■□□□ 1.52
SPIDR-220ENST00000522900 FAM177BA6PVY3 158 aa24.51■■□□□ 1.51
SPIDR-220ENST00000522900 EIF2S2P20042 333 aaKnown RBP24.51■■□□□ 1.51
SPIDR-220ENST00000522900 CCDC184Q52MB2 194 aa24.51■■□□□ 1.51
SPIDR-220ENST00000522900 ARFGEF1Q9Y6D6 1849 aa24.51■■□□□ 1.51
SPIDR-220ENST00000522900 LAMB4A4D0S4 1761 aa24.5■■□□□ 1.51
SPIDR-220ENST00000522900 CHL1O00533 1208 aa24.5■■□□□ 1.51
SPIDR-220ENST00000522900 RGL2O15211 777 aa24.5■■□□□ 1.51
SPIDR-220ENST00000522900 ST5P78524 1137 aa24.5■■□□□ 1.51
SPIDR-220ENST00000522900 LAS1LQ9Y4W2 734 aaKnown RBP24.5■■□□□ 1.51
SPIDR-220ENST00000522900 ANKRD31Q8N7Z5 1873 aa24.49■■□□□ 1.51
SPIDR-220ENST00000522900 RASSF7Q02833 373 aa24.49■■□□□ 1.51
SPIDR-220ENST00000522900 PDIA6Q15084 440 aa24.49■■□□□ 1.51
SPIDR-220ENST00000522900 KRT24Q2M2I5 525 aa24.49■■□□□ 1.51
SPIDR-220ENST00000522900 ZNF316A6NFI3 1004 aaPredicted RBP24.48■■□□□ 1.51
SPIDR-220ENST00000522900 ERVV-1B6SEH8 477 aa24.48■■□□□ 1.51
SPIDR-220ENST00000522900 PRELPP51888 382 aa24.48■■□□□ 1.51
SPIDR-220ENST00000522900 MAP3K15Q6ZN16 1313 aa24.48■■□□□ 1.51
SPIDR-220ENST00000522900 LRP10Q7Z4F1 713 aa24.48■■□□□ 1.51
SPIDR-220ENST00000522900 RNF181Q9P0P0 153 aa24.48■■□□□ 1.51
SPIDR-220ENST00000522900 PDZRN3Q9UPQ7 1066 aa24.48■■□□□ 1.51
SPIDR-220ENST00000522900 ANXA1P04083 346 aa24.47■■□□□ 1.51
SPIDR-220ENST00000522900 SRGNP10124 158 aa24.47■■□□□ 1.51
SPIDR-220ENST00000522900 PROSER3Q2NL68 480 aa24.47■■□□□ 1.51
SPIDR-220ENST00000522900 NECTIN2Q92692 538 aa24.47■■□□□ 1.51
SPIDR-220ENST00000522900 ZBTB3Q9H5J0 574 aa24.47■■□□□ 1.51
SPIDR-220ENST00000522900 ZNF219Q9P2Y4 722 aaPredicted RBP24.47■■□□□ 1.51
SPIDR-220ENST00000522900 APAF1O14727 1248 aa24.46■■□□□ 1.51
SPIDR-220ENST00000522900 TPTE2Q6XPS3 522 aa24.46■■□□□ 1.51
SPIDR-220ENST00000522900 DLEC1Q9Y238 1755 aa24.45■■□□□ 1.5
SPIDR-220ENST00000522900 ERBB4Q15303 1308 aa24.45■■□□□ 1.5
SPIDR-220ENST00000522900 KIF3CO14782 793 aa24.45■■□□□ 1.5
SPIDR-220ENST00000522900 C21orf2O43822 256 aa24.45■■□□□ 1.5
SPIDR-220ENST00000522900 KIF6Q6ZMV9 814 aa24.45■■□□□ 1.5
SPIDR-220ENST00000522900 NFKBIEO00221 500 aa24.43■■□□□ 1.5
SPIDR-220ENST00000522900 STYK1Q6J9G0 422 aa24.43■■□□□ 1.5
SPIDR-220ENST00000522900 MASTLQ96GX5 879 aa24.43■■□□□ 1.5
SPIDR-220ENST00000522900 COL11A2P13942 1736 aaPredicted RBP24.42■■□□□ 1.5
SPIDR-220ENST00000522900 SENP3-EIF4A1A0A087X0R7 540 aa24.42■■□□□ 1.5
SPIDR-220ENST00000522900 KLRG2A4D1S0 409 aaPredicted RBP24.42■■□□□ 1.5
SPIDR-220ENST00000522900 GPTP24298 496 aa24.42■■□□□ 1.5
SPIDR-220ENST00000522900 CNKSR1Q969H4 720 aa24.42■■□□□ 1.5
SPIDR-220ENST00000522900 NMRK2Q9NPI5 230 aa24.42■■□□□ 1.5
SPIDR-220ENST00000522900 UBN2Q6ZU65 1347 aa24.41■■□□□ 1.5
SPIDR-220ENST00000522900 PRPF40BQ6NWY9 871 aaKnown RBP24.41■■□□□ 1.5
SPIDR-220ENST00000522900 NUTM1Q86Y26 1132 aa24.41■■□□□ 1.5
SPIDR-220ENST00000522900 CFAP44Q96MT7 982 aa24.41■■□□□ 1.5
SPIDR-220ENST00000522900 LMNB1P20700 586 aa24.4■■□□□ 1.5
SPIDR-220ENST00000522900 GTF2E1P29083 439 aaPredicted RBP24.4■■□□□ 1.5
SPIDR-220ENST00000522900 SUSD4Q5VX71 490 aa24.4■■□□□ 1.5
SPIDR-220ENST00000522900 GIGYF2Q6Y7W6 1299 aaKnown RBP24.4■■□□□ 1.5
SPIDR-220ENST00000522900 ZNF34Q8IZ26 560 aa24.4■■□□□ 1.5
SPIDR-220ENST00000522900 ERFEQ4G0M1 354 aa24.39■■□□□ 1.49
SPIDR-220ENST00000522900 COPS6Q7L5N1 327 aa24.39■■□□□ 1.49
SPIDR-220ENST00000522900 MBIPQ9NS73 344 aa24.39■■□□□ 1.49
SPIDR-220ENST00000522900 ZNF853P0CG23 659 aa24.38■■□□□ 1.49
SPIDR-220ENST00000522900 NPR1P16066 1061 aa24.38■■□□□ 1.49
SPIDR-220ENST00000522900 AIMP1Q12904 312 aaKnown RBP24.38■■□□□ 1.49
SPIDR-220ENST00000522900 XAGE3Q8WTP9 111 aa24.37■■□□□ 1.49
SPIDR-220ENST00000522900 C7orf43Q8WVR3 580 aa24.37■■□□□ 1.49
SPIDR-220ENST00000522900 NYXQ9GZU5 481 aa24.37■■□□□ 1.49
SPIDR-220ENST00000522900 ABCC12Q96J65 1359 aa24.37■■□□□ 1.49
SPIDR-220ENST00000522900 DDX21Q9NR30 783 aaKnown RBP eCLIP24.36■■□□□ 1.49
SPIDR-220ENST00000522900 CHPF2Q9P2E5 772 aa24.36■■□□□ 1.49
SPIDR-220ENST00000522900 SBF1O95248 1867 aa24.35■■□□□ 1.49
SPIDR-220ENST00000522900 NUP98P52948 1817 aa24.35■■□□□ 1.49
SPIDR-220ENST00000522900 SLX4Q8IY92 1834 aa24.35■■□□□ 1.49
SPIDR-220ENST00000522900 NTSR2O95665 410 aa24.34■■□□□ 1.49
SPIDR-220ENST00000522900 HDGFL1Q5TGJ6 251 aa24.34■■□□□ 1.49
SPIDR-220ENST00000522900 DUSP27Q5VZP5 1158 aa24.34■■□□□ 1.49
SPIDR-220ENST00000522900 OLFM4Q6UX06 510 aa24.34■■□□□ 1.49
SPIDR-220ENST00000522900 ANP32CO43423 234 aa24.33■■□□□ 1.49
SPIDR-220ENST00000522900 RRAGCQ9HB90 399 aa24.33■■□□□ 1.49
SPIDR-220ENST00000522900 IFT57Q9NWB7 429 aa24.33■■□□□ 1.49
SPIDR-220ENST00000522900 HOXB7P09629 217 aa24.32■■□□□ 1.48
SPIDR-220ENST00000522900 KDM2BQ8NHM5 1336 aa24.32■■□□□ 1.48
SPIDR-220ENST00000522900 CRY2Q49AN0 593 aa24.31■■□□□ 1.48
SPIDR-220ENST00000522900 C3orf67Q6ZVT6 689 aa24.31■■□□□ 1.48
SPIDR-220ENST00000522900 TAOK3Q9H2K8 898 aa24.31■■□□□ 1.48
SPIDR-220ENST00000522900 MRS2Q9HD23 443 aa24.31■■□□□ 1.48
SPIDR-220ENST00000522900 ELL2O00472 640 aaPredicted RBP24.3■■□□□ 1.48
SPIDR-220ENST00000522900 GNAI1P63096 354 aa24.3■■□□□ 1.48
SPIDR-220ENST00000522900 PARP10Q53GL7 1025 aa24.3■■□□□ 1.48
SPIDR-220ENST00000522900 PPP1R42Q7Z4L9 355 aa24.3■■□□□ 1.48
SPIDR-220ENST00000522900 TNRC6CQ9HCJ0 1690 aaKnown RBP24.3■■□□□ 1.48
SPIDR-220ENST00000522900 LTBP3Q9NS15 1303 aa24.3■■□□□ 1.48
SPIDR-220ENST00000522900 IBTKQ9P2D0 1353 aaPredicted RBP24.29■■□□□ 1.48
SPIDR-220ENST00000522900 GLTPD2A6NH11 291 aa24.29■■□□□ 1.48
SPIDR-220ENST00000522900 TOMM70O94826 608 aa24.29■■□□□ 1.48
SPIDR-220ENST00000522900 ALDH1B1P30837 517 aa24.29■■□□□ 1.48
SPIDR-220ENST00000522900 CALD1Q05682 793 aaKnown RBP24.29■■□□□ 1.48
SPIDR-220ENST00000522900 SOGA3Q5TF21 947 aa24.29■■□□□ 1.48
SPIDR-220ENST00000522900 UTP14AQ9BVJ6 771 aaKnown RBP24.29■■□□□ 1.48
SPIDR-220ENST00000522900 DBF4Q9UBU7 674 aaPredicted RBP24.29■■□□□ 1.48
SPIDR-220ENST00000522900 ZC3H4Q9UPT8 1303 aaKnown RBP24.29■■□□□ 1.48
SPIDR-220ENST00000522900 TCIRG1Q13488 830 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms