RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 PPP4R2Q9NY27 417 aa15.7■□□□□ 0.1
PABPC1-219ENST00000522387 IL6STP40189 918 aaPredicted RBP15.69■□□□□ 0.1
PABPC1-219ENST00000522387 EIF5P55010 431 aaKnown RBP15.69■□□□□ 0.1
PABPC1-219ENST00000522387 HLFQ16534 295 aa15.69■□□□□ 0.1
PABPC1-219ENST00000522387 SRP68Q9UHB9 627 aaKnown RBP15.69■□□□□ 0.1
PABPC1-219ENST00000522387 TAF1LQ8IZX4 1826 aa15.69■□□□□ 0.1
PABPC1-219ENST00000522387 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.69■□□□□ 0.1
PABPC1-219ENST00000522387 CWF19L2Q2TBE0 894 aaKnown RBP15.69■□□□□ 0.1
PABPC1-219ENST00000522387 RTL5Q5HYW3 569 aaPredicted RBP15.69■□□□□ 0.1
PABPC1-219ENST00000522387 CRBNQ96SW2 442 aa15.69■□□□□ 0.1
PABPC1-219ENST00000522387 ADCY9O60503 1353 aa15.69■□□□□ 0.1
PABPC1-219ENST00000522387 COL5A3P25940 1745 aaPredicted RBP15.69■□□□□ 0.1
PABPC1-219ENST00000522387 BRPF1P55201 1214 aaPredicted RBP15.68■□□□□ 0.1
PABPC1-219ENST00000522387 ARHGEF1Q92888 912 aaKnown RBP15.68■□□□□ 0.1
PABPC1-219ENST00000522387 PTPRCP08575 1304 aa15.68■□□□□ 0.1
PABPC1-219ENST00000522387 COL15A1P39059 1388 aa15.68■□□□□ 0.1
PABPC1-219ENST00000522387 C4BP0C0L5 1744 aa15.68■□□□□ 0.1
PABPC1-219ENST00000522387 FAM177BA6PVY3 158 aa15.68■□□□□ 0.1
PABPC1-219ENST00000522387 KIF6Q6ZMV9 814 aa15.68■□□□□ 0.1
PABPC1-219ENST00000522387 EXOC6Q8TAG9 804 aa15.68■□□□□ 0.1
PABPC1-219ENST00000522387 JARID2Q92833 1246 aaPredicted RBP15.68■□□□□ 0.1
PABPC1-219ENST00000522387 MYD88Q99836 296 aa15.68■□□□□ 0.1
PABPC1-219ENST00000522387 RNF123Q5XPI4 1314 aa15.68■□□□□ 0.1
PABPC1-219ENST00000522387 CNTNAP4Q9C0A0 1308 aa15.68■□□□□ 0.1
PABPC1-219ENST00000522387 DDX58O95786 925 aaKnown RBP15.67■□□□□ 0.1
PABPC1-219ENST00000522387 GPTP24298 496 aa15.67■□□□□ 0.1
PABPC1-219ENST00000522387 KSR2Q6VAB6 950 aa15.67■□□□□ 0.1
PABPC1-219ENST00000522387 BICDL1Q6ZP65 573 aa15.67■□□□□ 0.1
PABPC1-219ENST00000522387 DNAAF4Q8WXU2 420 aa15.67■□□□□ 0.1
PABPC1-219ENST00000522387 API5Q9BZZ5 524 aaKnown RBP15.67■□□□□ 0.1
PABPC1-219ENST00000522387 RPS6KA4O75676 772 aa15.67■□□□□ 0.1
PABPC1-219ENST00000522387 PDGFDQ9GZP0 370 aaPredicted RBP15.67■□□□□ 0.1
PABPC1-219ENST00000522387 ERBB4Q15303 1308 aa15.67■□□□□ 0.1
PABPC1-219ENST00000522387 RFC4P35249 363 aa15.66■□□□□ 0.1
PABPC1-219ENST00000522387 TRAPPC3LQ5T215 181 aa15.66■□□□□ 0.1
PABPC1-219ENST00000522387 USPL1Q5W0Q7 1092 aa15.66■□□□□ 0.1
PABPC1-219ENST00000522387 RC3H1Q5TC82 1133 aaKnown RBP15.66■□□□□ 0.1
PABPC1-219ENST00000522387 PLBD2Q8NHP8 589 aa15.66■□□□□ 0.1
PABPC1-219ENST00000522387 ARHGAP45Q92619 1136 aa15.66■□□□□ 0.1
PABPC1-219ENST00000522387 CACNA1FO60840 1977 aa15.65■□□□□ 0.1
PABPC1-219ENST00000522387 ZPR1O75312 459 aa15.65■□□□□ 0.1
PABPC1-219ENST00000522387 CCDC125Q86Z20 511 aa15.65■□□□□ 0.1
PABPC1-219ENST00000522387 MAP3K15Q6ZN16 1313 aa15.64■□□□□ 0.09
PABPC1-219ENST00000522387 AKT1S1Q96B36 256 aa15.64■□□□□ 0.09
PABPC1-219ENST00000522387 C1orf115Q9H7X2 142 aa15.64■□□□□ 0.09
PABPC1-219ENST00000522387 ABCC4O15439 1325 aa15.64■□□□□ 0.09
PABPC1-219ENST00000522387 CAMTA2O94983 1202 aa15.63■□□□□ 0.09
PABPC1-219ENST00000522387 IGKV5-2P06315 115 aa15.63■□□□□ 0.09
PABPC1-219ENST00000522387 PDE3AQ14432 1141 aa15.63■□□□□ 0.09
PABPC1-219ENST00000522387 SLC15A2Q16348 729 aa15.63■□□□□ 0.09
PABPC1-219ENST00000522387 MSL1Q68DK7 614 aa15.63■□□□□ 0.09
PABPC1-219ENST00000522387 COL23A1Q86Y22 540 aaPredicted RBP15.63■□□□□ 0.09
PABPC1-219ENST00000522387 NEXNQ0ZGT2 675 aa15.62■□□□□ 0.09
PABPC1-219ENST00000522387 MVPQ14764 893 aaKnown RBP15.62■□□□□ 0.09
PABPC1-219ENST00000522387 BEND3Q5T5X7 828 aa15.62■□□□□ 0.09
PABPC1-219ENST00000522387 METTL22Q9BUU2 404 aaPredicted RBP15.62■□□□□ 0.09
PABPC1-219ENST00000522387 SRCIN1Q9C0H9 1055 aa15.62■□□□□ 0.09
PABPC1-219ENST00000522387 ZNF831Q5JPB2 1677 aa15.62■□□□□ 0.09
PABPC1-219ENST00000522387 MEIS3Q99687 375 aa15.62■□□□□ 0.09
PABPC1-219ENST00000522387 STK32BQ9NY57 414 aa15.61■□□□□ 0.09
PABPC1-219ENST00000522387 NBPF7P0C2Y1 421 aaPredicted RBP15.61■□□□□ 0.09
PABPC1-219ENST00000522387 GIGYF2Q6Y7W6 1299 aaKnown RBP15.61■□□□□ 0.09
PABPC1-219ENST00000522387 SYNE4Q8N205 404 aa15.61■□□□□ 0.09
PABPC1-219ENST00000522387 CCDC24Q8N4L8 307 aa15.61■□□□□ 0.09
PABPC1-219ENST00000522387 PSDA5PKW4 1024 aaPredicted RBP15.6■□□□□ 0.09
PABPC1-219ENST00000522387 NIP7Q9Y221 180 aaKnown RBP eCLIP15.6■□□□□ 0.09
PABPC1-219ENST00000522387 PNPLA7Q6ZV29 1317 aa15.6■□□□□ 0.09
PABPC1-219ENST00000522387 UBR3Q6ZT12 1888 aa15.6■□□□□ 0.09
PABPC1-219ENST00000522387 NEURL1BA8MQ27 555 aa15.6■□□□□ 0.09
PABPC1-219ENST00000522387 SSFA2P28290 1259 aa15.6■□□□□ 0.09
PABPC1-219ENST00000522387 TCIRG1Q13488 830 aa15.6■□□□□ 0.09
PABPC1-219ENST00000522387 TBC1D9BQ66K14 1250 aa15.6■□□□□ 0.09
PABPC1-219ENST00000522387 BCL2L12Q9HB09 334 aa15.6■□□□□ 0.09
PABPC1-219ENST00000522387 C9orf78Q9NZ63 289 aaPredicted RBP15.6■□□□□ 0.09
PABPC1-219ENST00000522387 NARFQ9UHQ1 456 aa15.6■□□□□ 0.09
PABPC1-219ENST00000522387 ARFGEF2Q9Y6D5 1785 aa15.6■□□□□ 0.09
PABPC1-219ENST00000522387 CICQ96RK0 1608 aaPredicted RBP15.59■□□□□ 0.09
PABPC1-219ENST00000522387 MS4A1P11836 297 aa15.59■□□□□ 0.09
PABPC1-219ENST00000522387 R3HDM1Q15032 1099 aaKnown RBP15.59■□□□□ 0.09
PABPC1-219ENST00000522387 INTS3Q68E01 1043 aaKnown RBP15.59■□□□□ 0.09
PABPC1-219ENST00000522387 USP42Q9H9J4 1324 aaKnown RBP15.59■□□□□ 0.09
PABPC1-219ENST00000522387 CCT4P50991 539 aaKnown RBP15.59■□□□□ 0.09
PABPC1-219ENST00000522387 LINS1Q8NG48 757 aa15.59■□□□□ 0.09
PABPC1-219ENST00000522387 FAM89AQ96GI7 184 aa15.59■□□□□ 0.09
PABPC1-219ENST00000522387 UBN2Q6ZU65 1347 aa15.58■□□□□ 0.09
PABPC1-219ENST00000522387 A0A087WZG4 1122 aa15.58■□□□□ 0.08
PABPC1-219ENST00000522387 ZBTB7BO15156 539 aaPredicted RBP15.58■□□□□ 0.08
PABPC1-219ENST00000522387 ERICH6Q7L0X2 663 aa15.58■□□□□ 0.08
PABPC1-219ENST00000522387 UBE3BQ7Z3V4 1068 aa15.58■□□□□ 0.08
PABPC1-219ENST00000522387 USP44Q9H0E7 712 aa15.58■□□□□ 0.08
PABPC1-219ENST00000522387 RREB1Q92766 1687 aa15.57■□□□□ 0.08
PABPC1-219ENST00000522387 GYS1P13807 737 aa15.57■□□□□ 0.08
PABPC1-219ENST00000522387 NUTM1Q86Y26 1132 aa15.57■□□□□ 0.08
PABPC1-219ENST00000522387 CCDC136Q96JN2 1154 aa15.57■□□□□ 0.08
PABPC1-219ENST00000522387 DDX19BQ9UMR2 479 aa15.57■□□□□ 0.08
PABPC1-219ENST00000522387 NUP98P52948 1817 aa15.57■□□□□ 0.08
PABPC1-219ENST00000522387 ERVV-1B6SEH8 477 aa15.57■□□□□ 0.08
PABPC1-219ENST00000522387 GCKRQ14397 625 aa15.57■□□□□ 0.08
PABPC1-219ENST00000522387 TUBGCP6Q96RT7 1819 aa15.57■□□□□ 0.08
PABPC1-219ENST00000522387 NUP188Q5SRE5 1749 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms