RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 TSPYL4Q9UJ04 414 aa27.26■■□□□ 1.95
SDCBP-209ENST00000522243 ST5P78524 1137 aa27.25■■□□□ 1.95
SDCBP-209ENST00000522243 NEUROD2Q15784 382 aa27.25■■□□□ 1.95
SDCBP-209ENST00000522243 HLFQ16534 295 aa27.25■■□□□ 1.95
SDCBP-209ENST00000522243 NBPF5PQ86XG9 351 aaPredicted RBP27.24■■□□□ 1.95
SDCBP-209ENST00000522243 ZNF219Q9P2Y4 722 aaPredicted RBP27.24■■□□□ 1.95
SDCBP-209ENST00000522243 NIP7Q9Y221 180 aaKnown RBP eCLIP27.24■■□□□ 1.95
SDCBP-209ENST00000522243 CACNA1SQ13698 1873 aa27.23■■□□□ 1.95
SDCBP-209ENST00000522243 FAM177BA6PVY3 158 aa27.23■■□□□ 1.95
SDCBP-209ENST00000522243 MYL6BP14649 208 aa27.23■■□□□ 1.95
SDCBP-209ENST00000522243 WDR43Q15061 677 aaKnown RBP eCLIP27.23■■□□□ 1.95
SDCBP-209ENST00000522243 NMRK2Q9NPI5 230 aa27.23■■□□□ 1.95
SDCBP-209ENST00000522243 PDZRN3Q9UPQ7 1066 aa27.23■■□□□ 1.95
SDCBP-209ENST00000522243 CCDC88AQ3V6T2 1871 aa27.22■■□□□ 1.95
SDCBP-209ENST00000522243 PRKRIP1Q9H875 184 aaPredicted RBP27.21■■□□□ 1.95
SDCBP-209ENST00000522243 PRELPP51888 382 aa27.2■■□□□ 1.94
SDCBP-209ENST00000522243 LMOD3Q0VAK6 560 aa27.2■■□□□ 1.94
SDCBP-209ENST00000522243 ADAMTS8Q9UP79 889 aa27.2■■□□□ 1.94
SDCBP-209ENST00000522243 C21orf2O43822 256 aa27.19■■□□□ 1.94
SDCBP-209ENST00000522243 TTLL7Q6ZT98 887 aa27.19■■□□□ 1.94
SDCBP-209ENST00000522243 RUNDC1Q96C34 613 aa27.19■■□□□ 1.94
SDCBP-209ENST00000522243 NUP98P52948 1817 aa27.18■■□□□ 1.94
SDCBP-209ENST00000522243 SLX4Q8IY92 1834 aa27.18■■□□□ 1.94
SDCBP-209ENST00000522243 NFKBIEO00221 500 aa27.17■■□□□ 1.94
SDCBP-209ENST00000522243 RGL2O15211 777 aa27.17■■□□□ 1.94
SDCBP-209ENST00000522243 SRGNP10124 158 aa27.17■■□□□ 1.94
SDCBP-209ENST00000522243 EIF2S2P20042 333 aaKnown RBP27.17■■□□□ 1.94
SDCBP-209ENST00000522243 TPTE2Q6XPS3 522 aa27.17■■□□□ 1.94
SDCBP-209ENST00000522243 LMNB1P20700 586 aa27.16■■□□□ 1.94
SDCBP-209ENST00000522243 STYK1Q6J9G0 422 aa27.16■■□□□ 1.94
SDCBP-209ENST00000522243 KIF6Q6ZMV9 814 aa27.16■■□□□ 1.94
SDCBP-209ENST00000522243 CNKSR1Q969H4 720 aa27.16■■□□□ 1.94
SDCBP-209ENST00000522243 MASTLQ96GX5 879 aa27.16■■□□□ 1.94
SDCBP-209ENST00000522243 MAP3K15Q6ZN16 1313 aa27.16■■□□□ 1.94
SDCBP-209ENST00000522243 ZBTB3Q9H5J0 574 aa27.15■■□□□ 1.94
SDCBP-209ENST00000522243 ERVV-1B6SEH8 477 aa27.14■■□□□ 1.94
SDCBP-209ENST00000522243 TRIM35Q9UPQ4 493 aa27.14■■□□□ 1.94
SDCBP-209ENST00000522243 LAS1LQ9Y4W2 734 aaKnown RBP27.14■■□□□ 1.94
SDCBP-209ENST00000522243 KDM2BQ8NHM5 1336 aa27.14■■□□□ 1.93
SDCBP-209ENST00000522243 FER1L6Q2WGJ9 1857 aa27.13■■□□□ 1.93
SDCBP-209ENST00000522243 ARFGEF2Q9Y6D5 1785 aa27.13■■□□□ 1.93
SDCBP-209ENST00000522243 GTF2E1P29083 439 aaPredicted RBP27.13■■□□□ 1.93
SDCBP-209ENST00000522243 PRPF40BQ6NWY9 871 aaKnown RBP27.13■■□□□ 1.93
SDCBP-209ENST00000522243 BABAM1Q9NWV8 329 aa27.13■■□□□ 1.93
SDCBP-209ENST00000522243 TIAM2Q8IVF5 1701 aa27.13■■□□□ 1.93
SDCBP-209ENST00000522243 TOMM70O94826 608 aa27.12■■□□□ 1.93
SDCBP-209ENST00000522243 ANXA1P04083 346 aa27.12■■□□□ 1.93
SDCBP-209ENST00000522243 GPTP24298 496 aa27.12■■□□□ 1.93
SDCBP-209ENST00000522243 NECTIN2Q92692 538 aa27.12■■□□□ 1.93
SDCBP-209ENST00000522243 RRAGCQ9HB90 399 aa27.12■■□□□ 1.93
SDCBP-209ENST00000522243 ERBB4Q15303 1308 aa27.12■■□□□ 1.93
SDCBP-209ENST00000522243 HSPA6P17066 643 aa27.11■■□□□ 1.93
SDCBP-209ENST00000522243 NUTM1Q86Y26 1132 aa27.11■■□□□ 1.93
SDCBP-209ENST00000522243 NPR1P16066 1061 aa27.1■■□□□ 1.93
SDCBP-209ENST00000522243 PDIA6Q15084 440 aa27.1■■□□□ 1.93
SDCBP-209ENST00000522243 KRT24Q2M2I5 525 aa27.1■■□□□ 1.93
SDCBP-209ENST00000522243 PROSER3Q2NL68 480 aa27.1■■□□□ 1.93
SDCBP-209ENST00000522243 TNRC6CQ9HCJ0 1690 aaKnown RBP27.09■■□□□ 1.93
SDCBP-209ENST00000522243 KLRG2A4D1S0 409 aaPredicted RBP27.08■■□□□ 1.93
SDCBP-209ENST00000522243 CHL1O00533 1208 aa27.08■■□□□ 1.93
SDCBP-209ENST00000522243 LRP10Q7Z4F1 713 aa27.08■■□□□ 1.93
SDCBP-209ENST00000522243 C16orf71Q8IYS4 520 aaPredicted RBP27.08■■□□□ 1.93
SDCBP-209ENST00000522243 UBN2Q6ZU65 1347 aa27.08■■□□□ 1.93
SDCBP-209ENST00000522243 ZC3H4Q9UPT8 1303 aaKnown RBP27.08■■□□□ 1.93
SDCBP-209ENST00000522243 ERFEQ4G0M1 354 aa27.07■■□□□ 1.92
SDCBP-209ENST00000522243 NYXQ9GZU5 481 aa27.07■■□□□ 1.92
SDCBP-209ENST00000522243 ABCC12Q96J65 1359 aa27.07■■□□□ 1.92
SDCBP-209ENST00000522243 DICER1Q9UPY3 1922 aaKnown RBP27.06■■□□□ 1.92
SDCBP-209ENST00000522243 SUSD4Q5VX71 490 aa27.06■■□□□ 1.92
SDCBP-209ENST00000522243 GIGYF2Q6Y7W6 1299 aaKnown RBP27.06■■□□□ 1.92
SDCBP-209ENST00000522243 TAOK3Q9H2K8 898 aa27.06■■□□□ 1.92
SDCBP-209ENST00000522243 GLTPD2A6NH11 291 aa27.05■■□□□ 1.92
SDCBP-209ENST00000522243 ZNF34Q8IZ26 560 aa27.05■■□□□ 1.92
SDCBP-209ENST00000522243 AIMP1Q12904 312 aaKnown RBP27.04■■□□□ 1.92
SDCBP-209ENST00000522243 C7orf43Q8WVR3 580 aa27.04■■□□□ 1.92
SDCBP-209ENST00000522243 APAF1O14727 1248 aa27.03■■□□□ 1.92
SDCBP-209ENST00000522243 ZEB1P37275 1124 aaPredicted RBP27.03■■□□□ 1.92
SDCBP-209ENST00000522243 SOGA3Q5TF21 947 aa27.03■■□□□ 1.92
SDCBP-209ENST00000522243 OLFM4Q6UX06 510 aa27.03■■□□□ 1.92
SDCBP-209ENST00000522243 LTBP3Q9NS15 1303 aa27.03■■□□□ 1.92
SDCBP-209ENST00000522243 CCDC93Q567U6 631 aa27.02■■□□□ 1.92
SDCBP-209ENST00000522243 COPS6Q7L5N1 327 aa27.02■■□□□ 1.92
SDCBP-209ENST00000522243 RBM46Q8TBY0 533 aaKnown RBP27.02■■□□□ 1.92
SDCBP-209ENST00000522243 XAGE3Q8WTP9 111 aa27.01■■□□□ 1.91
SDCBP-209ENST00000522243 NTSR2O95665 410 aa27■■□□□ 1.91
SDCBP-209ENST00000522243 ALDH1B1P30837 517 aa27■■□□□ 1.91
SDCBP-209ENST00000522243 CCDC184Q52MB2 194 aa27■■□□□ 1.91
SDCBP-209ENST00000522243 IBTKQ9P2D0 1353 aaPredicted RBP26.99■■□□□ 1.91
SDCBP-209ENST00000522243 DPY19L2Q6NUT2 758 aa26.99■■□□□ 1.91
SDCBP-209ENST00000522243 CFAP44Q96MT7 982 aa26.99■■□□□ 1.91
SDCBP-209ENST00000522243 DDX21Q9NR30 783 aaKnown RBP eCLIP26.99■■□□□ 1.91
SDCBP-209ENST00000522243 CRY2Q49AN0 593 aa26.98■■□□□ 1.91
SDCBP-209ENST00000522243 PPP1R42Q7Z4L9 355 aa26.98■■□□□ 1.91
SDCBP-209ENST00000522243 CHPF2Q9P2E5 772 aa26.98■■□□□ 1.91
SDCBP-209ENST00000522243 ANKRD36CQ5JPF3 1778 aa26.97■■□□□ 1.91
SDCBP-209ENST00000522243 VEGFAP15692 232 aaPredicted RBP26.97■■□□□ 1.91
SDCBP-209ENST00000522243 PARP10Q53GL7 1025 aa26.97■■□□□ 1.91
SDCBP-209ENST00000522243 HDGFL1Q5TGJ6 251 aa26.97■■□□□ 1.91
SDCBP-209ENST00000522243 RPGRQ92834 1020 aaKnown RBP26.97■■□□□ 1.91
SDCBP-209ENST00000522243 MBIPQ9NS73 344 aa26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms