RNA–Protein interactions for RNA: ENST00000521738.1

UBLCP1-203, Transcript of ubiquitin like domain containing CTD phosphatase 1, humanhuman

TSL 5

Gene UBLCP1, Length 421 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBLCP1-203ENST00000521738 DEPDC4Q8N2C3 294 aa6.99□□□□□ -1.29
UBLCP1-203ENST00000521738 C1orf216Q8TAB5 229 aa6.99□□□□□ -1.29
UBLCP1-203ENST00000521738 MAFBQ9Y5Q3 323 aaPredicted RBP6.99□□□□□ -1.29
UBLCP1-203ENST00000521738 A0A1W2PNR3 127 aa6.98□□□□□ -1.29
UBLCP1-203ENST00000521738 FAM229AH3BQW9 127 aa6.98□□□□□ -1.29
UBLCP1-203ENST00000521738 LZTS3O60299 673 aaPredicted RBP6.98□□□□□ -1.29
UBLCP1-203ENST00000521738 LMOD1P29536 600 aaPredicted RBP6.98□□□□□ -1.29
UBLCP1-203ENST00000521738 USP4Q13107 963 aa6.98□□□□□ -1.29
UBLCP1-203ENST00000521738 NCOA4Q13772 614 aa6.98□□□□□ -1.29
UBLCP1-203ENST00000521738 LRP8Q14114 963 aa6.98□□□□□ -1.29
UBLCP1-203ENST00000521738 CFAP70Q5T0N1 1121 aa6.98□□□□□ -1.29
UBLCP1-203ENST00000521738 PRR12Q9ULL5 1215 aa6.98□□□□□ -1.29
UBLCP1-203ENST00000521738 ELOA3CA0A087WX78 387 aaPredicted RBP6.97□□□□□ -1.29
UBLCP1-203ENST00000521738 USP17L3A6NCW0 530 aa6.97□□□□□ -1.29
UBLCP1-203ENST00000521738 USP17L4A6NCW7 530 aa6.97□□□□□ -1.29
UBLCP1-203ENST00000521738 ELOA3DA6NLF2 546 aaPredicted RBP6.97□□□□□ -1.29
UBLCP1-203ENST00000521738 RFX1P22670 979 aa6.97□□□□□ -1.29
UBLCP1-203ENST00000521738 EML3Q32P44 896 aa6.97□□□□□ -1.29
UBLCP1-203ENST00000521738 ELOA3BQ3SY89 546 aa6.97□□□□□ -1.29
UBLCP1-203ENST00000521738 USP17L2Q6R6M4 530 aa6.97□□□□□ -1.29
UBLCP1-203ENST00000521738 USP17L1Q7RTZ2 530 aa6.97□□□□□ -1.29
UBLCP1-203ENST00000521738 PLEKHM2Q8IWE5 1019 aa6.97□□□□□ -1.29
UBLCP1-203ENST00000521738 ELOA3Q8NG57 546 aa6.97□□□□□ -1.29
UBLCP1-203ENST00000521738 AIDAQ96BJ3 306 aa6.97□□□□□ -1.29
UBLCP1-203ENST00000521738 ARID3AQ99856 593 aa6.97□□□□□ -1.29
UBLCP1-203ENST00000521738 HYAL3O43820 417 aaPredicted RBP6.96□□□□□ -1.3
UBLCP1-203ENST00000521738 COL9A3Q14050 684 aaPredicted RBP6.96□□□□□ -1.3
UBLCP1-203ENST00000521738 ARSJQ5FYB0 599 aaPredicted RBP6.96□□□□□ -1.3
UBLCP1-203ENST00000521738 SIRT1Q96EB6 747 aa6.96□□□□□ -1.3
UBLCP1-203ENST00000521738 STRN4Q9NRL3 753 aa6.96□□□□□ -1.3
UBLCP1-203ENST00000521738 ALAS2P22557 587 aa6.95□□□□□ -1.3
UBLCP1-203ENST00000521738 GRIK4Q16099 956 aa6.95□□□□□ -1.3
UBLCP1-203ENST00000521738 NACC1Q96RE7 527 aa6.95□□□□□ -1.3
UBLCP1-203ENST00000521738 MDFIQ99750 246 aa6.95□□□□□ -1.3
UBLCP1-203ENST00000521738 NOD1Q9Y239 953 aa6.95□□□□□ -1.3
UBLCP1-203ENST00000521738 FAM157BP0CG42 384 aa6.94□□□□□ -1.3
UBLCP1-203ENST00000521738 NIFKQ9BYG3 293 aaKnown RBP6.94□□□□□ -1.3
UBLCP1-203ENST00000521738 MKRN1Q9UHC7 482 aaKnown RBP6.94□□□□□ -1.3
UBLCP1-203ENST00000521738 M0R082 166 aa6.93□□□□□ -1.3
UBLCP1-203ENST00000521738 H2AFB1P0C5Y9 115 aa6.93□□□□□ -1.3
UBLCP1-203ENST00000521738 H2AFB2P0C5Z0 115 aa6.93□□□□□ -1.3
UBLCP1-203ENST00000521738 TRIM28Q13263 835 aaKnown RBP6.93□□□□□ -1.3
UBLCP1-203ENST00000521738 KANK4Q5T7N3 995 aaPredicted RBP6.93□□□□□ -1.3
UBLCP1-203ENST00000521738 SYT9Q86SS6 491 aa6.93□□□□□ -1.3
UBLCP1-203ENST00000521738 ZNF417Q8TAU3 575 aa6.93□□□□□ -1.3
UBLCP1-203ENST00000521738 ZNF587Q96SQ5 575 aaPredicted RBP6.93□□□□□ -1.3
UBLCP1-203ENST00000521738 VRTNQ9H8Y1 702 aa6.93□□□□□ -1.3
UBLCP1-203ENST00000521738 MARK1Q9P0L2 795 aa6.93□□□□□ -1.3
UBLCP1-203ENST00000521738 SCNN1DP51172 638 aa6.92□□□□□ -1.3
UBLCP1-203ENST00000521738 CDCA8Q53HL2 280 aa6.92□□□□□ -1.3
UBLCP1-203ENST00000521738 ZIC5Q96T25 663 aa6.92□□□□□ -1.3
UBLCP1-203ENST00000521738 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.91□□□□□ -1.3
UBLCP1-203ENST00000521738 EFSO43281 561 aa6.91□□□□□ -1.3
UBLCP1-203ENST00000521738 GTF2IP78347 998 aa6.91□□□□□ -1.3
UBLCP1-203ENST00000521738 NBPF1Q3BBV0 1214 aa6.91□□□□□ -1.3
UBLCP1-203ENST00000521738 C8orf86Q6ZUL3 223 aa6.91□□□□□ -1.3
UBLCP1-203ENST00000521738 TRIM50Q86XT4 487 aa6.91□□□□□ -1.3
UBLCP1-203ENST00000521738 ZNF295-AS1Q8N0V1 137 aa6.91□□□□□ -1.3
UBLCP1-203ENST00000521738 PRDM6Q9NQX0 595 aa6.91□□□□□ -1.3
UBLCP1-203ENST00000521738 STARD13Q9Y3M8 1113 aa6.91□□□□□ -1.3
UBLCP1-203ENST00000521738 PCDHGA11Q9Y5H2 935 aa6.91□□□□□ -1.3
UBLCP1-203ENST00000521738 ADARB2-AS1A8MUL3 147 aa6.9□□□□□ -1.3
UBLCP1-203ENST00000521738 INHAP05111 366 aa6.9□□□□□ -1.3
UBLCP1-203ENST00000521738 RASA1P20936 1047 aa6.9□□□□□ -1.3
UBLCP1-203ENST00000521738 ATP1A2P50993 1020 aa6.9□□□□□ -1.3
UBLCP1-203ENST00000521738 GDF10P55107 478 aa6.9□□□□□ -1.3
UBLCP1-203ENST00000521738 SRPK2P78362 688 aaKnown RBP6.9□□□□□ -1.3
UBLCP1-203ENST00000521738 CLDN10P78369 228 aa6.9□□□□□ -1.3
UBLCP1-203ENST00000521738 LAMC2Q13753 1193 aa6.9□□□□□ -1.3
UBLCP1-203ENST00000521738 SAMD5Q5TGI4 173 aa6.9□□□□□ -1.3
UBLCP1-203ENST00000521738 OGFOD1Q8N543 542 aa6.9□□□□□ -1.3
UBLCP1-203ENST00000521738 PBXIP1Q96AQ6 731 aa6.9□□□□□ -1.3
UBLCP1-203ENST00000521738 GJA3Q9Y6H8 435 aa6.9□□□□□ -1.3
UBLCP1-203ENST00000521738 ZBTB7BO15156 539 aaPredicted RBP6.89□□□□□ -1.31
UBLCP1-203ENST00000521738 SIN3BO75182 1162 aa6.89□□□□□ -1.31
UBLCP1-203ENST00000521738 ALBP02768 609 aa6.89□□□□□ -1.31
UBLCP1-203ENST00000521738 NID1P14543 1247 aa6.89□□□□□ -1.31
UBLCP1-203ENST00000521738 TATP17735 454 aaPredicted RBP6.89□□□□□ -1.31
UBLCP1-203ENST00000521738 SMTNP53814 917 aa6.89□□□□□ -1.31
UBLCP1-203ENST00000521738 PSME1Q06323 249 aa6.89□□□□□ -1.31
UBLCP1-203ENST00000521738 ADGRE1Q14246 886 aa6.89□□□□□ -1.31
UBLCP1-203ENST00000521738 MBTPS1Q14703 1052 aa6.89□□□□□ -1.31
UBLCP1-203ENST00000521738 LARP1Q6PKG0 1096 aaKnown RBP6.89□□□□□ -1.31
UBLCP1-203ENST00000521738 MICALL1Q8N3F8 863 aa6.89□□□□□ -1.31
UBLCP1-203ENST00000521738 ZDHHC3Q9NYG2 299 aa6.89□□□□□ -1.31
UBLCP1-203ENST00000521738 C9orf172C9J069 976 aa6.88□□□□□ -1.31
UBLCP1-203ENST00000521738 CRTC2Q53ET0 693 aaPredicted RBP6.88□□□□□ -1.31
UBLCP1-203ENST00000521738 KIAA1024Q9UPX6 916 aa6.88□□□□□ -1.31
UBLCP1-203ENST00000521738 FAM196BA6NMK8 535 aa6.87□□□□□ -1.31
UBLCP1-203ENST00000521738 PPP1R15AO75807 674 aaPredicted RBP6.87□□□□□ -1.31
UBLCP1-203ENST00000521738 SELPP16109 830 aa6.87□□□□□ -1.31
UBLCP1-203ENST00000521738 PTK7Q13308 1070 aa6.87□□□□□ -1.31
UBLCP1-203ENST00000521738 CCDC102BQ68D86 513 aa6.87□□□□□ -1.31
UBLCP1-203ENST00000521738 MCTP1Q6DN14 999 aa6.87□□□□□ -1.31
UBLCP1-203ENST00000521738 LARGE2Q8N3Y3 721 aa6.87□□□□□ -1.31
UBLCP1-203ENST00000521738 ZNF594Q96JF6 807 aaPredicted RBP6.87□□□□□ -1.31
UBLCP1-203ENST00000521738 USP17L15C9J2P7 530 aa6.86□□□□□ -1.31
UBLCP1-203ENST00000521738 USP17L10C9JJH3 530 aa6.86□□□□□ -1.31
UBLCP1-203ENST00000521738 USP17L13C9JLJ4 530 aa6.86□□□□□ -1.31
UBLCP1-203ENST00000521738 USP17L12C9JPN9 530 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms