RNA–Protein interactions for RNA: ENST00000521588.3

R3HCC1-207, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 2

Gene R3HCC1, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-207ENST00000521588 ZNF526Q8TF50 670 aaPredicted RBP25.37■■□□□ 1.65
R3HCC1-207ENST00000521588 TRIM35Q9UPQ4 493 aa25.37■■□□□ 1.65
R3HCC1-207ENST00000521588 HLFQ16534 295 aa25.36■■□□□ 1.65
R3HCC1-207ENST00000521588 C9orf131Q5VYM1 1079 aa25.36■■□□□ 1.65
R3HCC1-207ENST00000521588 ERVV-1B6SEH8 477 aa25.34■■□□□ 1.65
R3HCC1-207ENST00000521588 ST5P78524 1137 aa25.34■■□□□ 1.65
R3HCC1-207ENST00000521588 NBPF5PQ86XG9 351 aaPredicted RBP25.34■■□□□ 1.65
R3HCC1-207ENST00000521588 NIP7Q9Y221 180 aaKnown RBP eCLIP25.34■■□□□ 1.65
R3HCC1-207ENST00000521588 ERBB4Q15303 1308 aa25.34■■□□□ 1.65
R3HCC1-207ENST00000521588 CHL1O00533 1208 aa25.33■■□□□ 1.65
R3HCC1-207ENST00000521588 NGEFQ8N5V2 710 aa25.33■■□□□ 1.65
R3HCC1-207ENST00000521588 SBF1O95248 1867 aa25.32■■□□□ 1.64
R3HCC1-207ENST00000521588 TTLL7Q6ZT98 887 aa25.32■■□□□ 1.64
R3HCC1-207ENST00000521588 ZNF622Q969S3 477 aaKnown RBP eCLIP25.32■■□□□ 1.64
R3HCC1-207ENST00000521588 MAP3K15Q6ZN16 1313 aa25.32■■□□□ 1.64
R3HCC1-207ENST00000521588 NPHP1O15259 732 aa25.31■■□□□ 1.64
R3HCC1-207ENST00000521588 SRGNP10124 158 aa25.31■■□□□ 1.64
R3HCC1-207ENST00000521588 MYL6BP14649 208 aa25.31■■□□□ 1.64
R3HCC1-207ENST00000521588 PDIA6Q15084 440 aa25.31■■□□□ 1.64
R3HCC1-207ENST00000521588 TPTE2Q6XPS3 522 aa25.31■■□□□ 1.64
R3HCC1-207ENST00000521588 LRP10Q7Z4F1 713 aa25.31■■□□□ 1.64
R3HCC1-207ENST00000521588 COL11A2P13942 1736 aaPredicted RBP25.31■■□□□ 1.64
R3HCC1-207ENST00000521588 KLRG2A4D1S0 409 aaPredicted RBP25.3■■□□□ 1.64
R3HCC1-207ENST00000521588 KIF3CO14782 793 aa25.3■■□□□ 1.64
R3HCC1-207ENST00000521588 RNF181Q9P0P0 153 aa25.3■■□□□ 1.64
R3HCC1-207ENST00000521588 STYK1Q6J9G0 422 aa25.29■■□□□ 1.64
R3HCC1-207ENST00000521588 NUP98P52948 1817 aa25.28■■□□□ 1.64
R3HCC1-207ENST00000521588 EIF2S2P20042 333 aaKnown RBP25.28■■□□□ 1.64
R3HCC1-207ENST00000521588 PRELPP51888 382 aa25.28■■□□□ 1.64
R3HCC1-207ENST00000521588 RASSF7Q02833 373 aa25.28■■□□□ 1.64
R3HCC1-207ENST00000521588 KIF6Q6ZMV9 814 aa25.28■■□□□ 1.64
R3HCC1-207ENST00000521588 MASTLQ96GX5 879 aa25.28■■□□□ 1.64
R3HCC1-207ENST00000521588 CNKSR1Q969H4 720 aa25.27■■□□□ 1.64
R3HCC1-207ENST00000521588 NFKBIEO00221 500 aa25.26■■□□□ 1.63
R3HCC1-207ENST00000521588 FAM177BA6PVY3 158 aa25.25■■□□□ 1.63
R3HCC1-207ENST00000521588 C21orf2O43822 256 aa25.25■■□□□ 1.63
R3HCC1-207ENST00000521588 LMNB1P20700 586 aa25.25■■□□□ 1.63
R3HCC1-207ENST00000521588 PROSER3Q2NL68 480 aa25.25■■□□□ 1.63
R3HCC1-207ENST00000521588 ZBTB3Q9H5J0 574 aa25.25■■□□□ 1.63
R3HCC1-207ENST00000521588 SENP3-EIF4A1A0A087X0R7 540 aa25.24■■□□□ 1.63
R3HCC1-207ENST00000521588 ZNF316A6NFI3 1004 aaPredicted RBP25.24■■□□□ 1.63
R3HCC1-207ENST00000521588 APAF1O14727 1248 aa25.24■■□□□ 1.63
R3HCC1-207ENST00000521588 KRT24Q2M2I5 525 aa25.24■■□□□ 1.63
R3HCC1-207ENST00000521588 CCDC184Q52MB2 194 aa25.24■■□□□ 1.63
R3HCC1-207ENST00000521588 ZNF34Q8IZ26 560 aa25.24■■□□□ 1.63
R3HCC1-207ENST00000521588 CFAP44Q96MT7 982 aa25.24■■□□□ 1.63
R3HCC1-207ENST00000521588 LAS1LQ9Y4W2 734 aaKnown RBP25.24■■□□□ 1.63
R3HCC1-207ENST00000521588 SLX4Q8IY92 1834 aa25.23■■□□□ 1.63
R3HCC1-207ENST00000521588 GIGYF2Q6Y7W6 1299 aaKnown RBP25.23■■□□□ 1.63
R3HCC1-207ENST00000521588 ZC3H4Q9UPT8 1303 aaKnown RBP25.22■■□□□ 1.63
R3HCC1-207ENST00000521588 ANXA1P04083 346 aa25.22■■□□□ 1.63
R3HCC1-207ENST00000521588 NPR1P16066 1061 aa25.22■■□□□ 1.63
R3HCC1-207ENST00000521588 PRPF40BQ6NWY9 871 aaKnown RBP25.22■■□□□ 1.63
R3HCC1-207ENST00000521588 NYXQ9GZU5 481 aa25.22■■□□□ 1.63
R3HCC1-207ENST00000521588 NMRK2Q9NPI5 230 aa25.22■■□□□ 1.63
R3HCC1-207ENST00000521588 ZNF219Q9P2Y4 722 aaPredicted RBP25.22■■□□□ 1.63
R3HCC1-207ENST00000521588 UBN2Q6ZU65 1347 aa25.21■■□□□ 1.63
R3HCC1-207ENST00000521588 ZNF853P0CG23 659 aa25.21■■□□□ 1.63
R3HCC1-207ENST00000521588 C7orf43Q8WVR3 580 aa25.21■■□□□ 1.63
R3HCC1-207ENST00000521588 FER1L6Q2WGJ9 1857 aa25.2■■□□□ 1.62
R3HCC1-207ENST00000521588 GPTP24298 496 aa25.2■■□□□ 1.62
R3HCC1-207ENST00000521588 GTF2E1P29083 439 aaPredicted RBP25.2■■□□□ 1.62
R3HCC1-207ENST00000521588 NECTIN2Q92692 538 aa25.2■■□□□ 1.62
R3HCC1-207ENST00000521588 DDX21Q9NR30 783 aaKnown RBP eCLIP25.2■■□□□ 1.62
R3HCC1-207ENST00000521588 ARFGEF2Q9Y6D5 1785 aa25.2■■□□□ 1.62
R3HCC1-207ENST00000521588 CCDC88AQ3V6T2 1871 aa25.19■■□□□ 1.62
R3HCC1-207ENST00000521588 IBTKQ9P2D0 1353 aaPredicted RBP25.19■■□□□ 1.62
R3HCC1-207ENST00000521588 HOXB7P09629 217 aa25.19■■□□□ 1.62
R3HCC1-207ENST00000521588 ERFEQ4G0M1 354 aa25.19■■□□□ 1.62
R3HCC1-207ENST00000521588 SUSD4Q5VX71 490 aa25.19■■□□□ 1.62
R3HCC1-207ENST00000521588 NUTM1Q86Y26 1132 aa25.19■■□□□ 1.62
R3HCC1-207ENST00000521588 CEP350Q5VT06 3117 aa25.19■■□□□ 1.62
R3HCC1-207ENST00000521588 KDM2BQ8NHM5 1336 aa25.18■■□□□ 1.62
R3HCC1-207ENST00000521588 LTBP3Q9NS15 1303 aa25.18■■□□□ 1.62
R3HCC1-207ENST00000521588 COPS6Q7L5N1 327 aa25.18■■□□□ 1.62
R3HCC1-207ENST00000521588 MBIPQ9NS73 344 aa25.18■■□□□ 1.62
R3HCC1-207ENST00000521588 ABCC12Q96J65 1359 aa25.18■■□□□ 1.62
R3HCC1-207ENST00000521588 CRY2Q49AN0 593 aa25.17■■□□□ 1.62
R3HCC1-207ENST00000521588 SOGA3Q5TF21 947 aa25.17■■□□□ 1.62
R3HCC1-207ENST00000521588 TOMM70O94826 608 aa25.16■■□□□ 1.62
R3HCC1-207ENST00000521588 NTSR2O95665 410 aa25.16■■□□□ 1.62
R3HCC1-207ENST00000521588 CACNA1SQ13698 1873 aa25.16■■□□□ 1.62
R3HCC1-207ENST00000521588 RIC1Q4ADV7 1423 aa25.16■■□□□ 1.62
R3HCC1-207ENST00000521588 XAGE3Q8WTP9 111 aa25.16■■□□□ 1.62
R3HCC1-207ENST00000521588 ALDH1B1P30837 517 aa25.15■■□□□ 1.62
R3HCC1-207ENST00000521588 PARP10Q53GL7 1025 aa25.15■■□□□ 1.62
R3HCC1-207ENST00000521588 IFT57Q9NWB7 429 aa25.15■■□□□ 1.62
R3HCC1-207ENST00000521588 TNRC6CQ9HCJ0 1690 aaKnown RBP25.14■■□□□ 1.62
R3HCC1-207ENST00000521588 GLTPD2A6NH11 291 aa25.14■■□□□ 1.62
R3HCC1-207ENST00000521588 GNAI1P63096 354 aa25.14■■□□□ 1.62
R3HCC1-207ENST00000521588 CALD1Q05682 793 aaKnown RBP25.14■■□□□ 1.62
R3HCC1-207ENST00000521588 AIMP1Q12904 312 aaKnown RBP25.14■■□□□ 1.62
R3HCC1-207ENST00000521588 HDGFL1Q5TGJ6 251 aa25.14■■□□□ 1.62
R3HCC1-207ENST00000521588 DUSP27Q5VZP5 1158 aa25.14■■□□□ 1.62
R3HCC1-207ENST00000521588 TAOK3Q9H2K8 898 aa25.14■■□□□ 1.62
R3HCC1-207ENST00000521588 CHPF2Q9P2E5 772 aa25.14■■□□□ 1.62
R3HCC1-207ENST00000521588 PPP1R42Q7Z4L9 355 aa25.13■■□□□ 1.61
R3HCC1-207ENST00000521588 RRAGCQ9HB90 399 aa25.13■■□□□ 1.61
R3HCC1-207ENST00000521588 DICER1Q9UPY3 1922 aaKnown RBP25.12■■□□□ 1.61
R3HCC1-207ENST00000521588 HSPA6P17066 643 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms