RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 C4BP0C0L5 1744 aa7.22□□□□□ -1.25
CTNNA1-220ENST00000520260 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.22□□□□□ -1.25
CTNNA1-220ENST00000520260 PHF14O94880 888 aa7.22□□□□□ -1.25
CTNNA1-220ENST00000520260 CT47B1P0C2W7 299 aaPredicted RBP7.22□□□□□ -1.25
CTNNA1-220ENST00000520260 IER5LQ5T953 404 aa7.22□□□□□ -1.25
CTNNA1-220ENST00000520260 CCDC30Q5VVM6 783 aa7.22□□□□□ -1.25
CTNNA1-220ENST00000520260 ARXQ96QS3 562 aa7.22□□□□□ -1.25
CTNNA1-220ENST00000520260 DBF4Q9UBU7 674 aaPredicted RBP7.22□□□□□ -1.25
CTNNA1-220ENST00000520260 PDZRN3Q9UPQ7 1066 aa7.22□□□□□ -1.25
CTNNA1-220ENST00000520260 RRP7AQ9Y3A4 280 aaKnown RBP7.22□□□□□ -1.25
CTNNA1-220ENST00000520260 ZNF330Q9Y3S2 320 aaPredicted RBP7.22□□□□□ -1.25
CTNNA1-220ENST00000520260 PARP3Q9Y6F1 533 aa7.22□□□□□ -1.25
CTNNA1-220ENST00000520260 PAPPAQ13219 1627 aa7.22□□□□□ -1.25
CTNNA1-220ENST00000520260 QSER1Q2KHR3 1735 aa7.21□□□□□ -1.25
CTNNA1-220ENST00000520260 CHL1O00533 1208 aa7.21□□□□□ -1.26
CTNNA1-220ENST00000520260 SLC39A6Q13433 755 aa7.21□□□□□ -1.26
CTNNA1-220ENST00000520260 HDGFL1Q5TGJ6 251 aa7.21□□□□□ -1.26
CTNNA1-220ENST00000520260 WWC1Q8IX03 1113 aa7.21□□□□□ -1.26
CTNNA1-220ENST00000520260 ZNF496Q96IT1 587 aaPredicted RBP7.21□□□□□ -1.26
CTNNA1-220ENST00000520260 HYPKQ9NX55 129 aa7.21□□□□□ -1.26
CTNNA1-220ENST00000520260 COL15A1P39059 1388 aa7.2□□□□□ -1.26
CTNNA1-220ENST00000520260 PSDA5PKW4 1024 aaPredicted RBP7.2□□□□□ -1.26
CTNNA1-220ENST00000520260 CYP19A1P11511 503 aaPredicted RBP7.2□□□□□ -1.26
CTNNA1-220ENST00000520260 CANXP27824 592 aaKnown RBP7.2□□□□□ -1.26
CTNNA1-220ENST00000520260 EIF4A1P60842 406 aaKnown RBP7.2□□□□□ -1.26
CTNNA1-220ENST00000520260 DCTN1Q14203 1278 aa7.2□□□□□ -1.26
CTNNA1-220ENST00000520260 CLEC4GQ6UXB4 293 aa7.2□□□□□ -1.26
CTNNA1-220ENST00000520260 ERICH6Q7L0X2 663 aa7.2□□□□□ -1.26
CTNNA1-220ENST00000520260 DNAJC10Q8IXB1 793 aa7.2□□□□□ -1.26
CTNNA1-220ENST00000520260 LINC00116Q8NCU8 138 aa7.2□□□□□ -1.26
CTNNA1-220ENST00000520260 NYXQ9GZU5 481 aa7.2□□□□□ -1.26
CTNNA1-220ENST00000520260 TMX4Q9H1E5 349 aaPredicted RBP7.2□□□□□ -1.26
CTNNA1-220ENST00000520260 LRRC4BQ9NT99 713 aa7.2□□□□□ -1.26
CTNNA1-220ENST00000520260 TRIM35Q9UPQ4 493 aa7.2□□□□□ -1.26
CTNNA1-220ENST00000520260 KCPQ6ZWJ8 1503 aa7.2□□□□□ -1.26
CTNNA1-220ENST00000520260 RNF123Q5XPI4 1314 aa7.2□□□□□ -1.26
CTNNA1-220ENST00000520260 UBR2Q8IWV8 1755 aa7.2□□□□□ -1.26
CTNNA1-220ENST00000520260 SIPA1L3O60292 1781 aaPredicted RBP7.19□□□□□ -1.26
CTNNA1-220ENST00000520260 SNPHO15079 494 aa7.19□□□□□ -1.26
CTNNA1-220ENST00000520260 MAP3K13O43283 966 aa7.19□□□□□ -1.26
CTNNA1-220ENST00000520260 GIGYF1O75420 1035 aaPredicted RBP7.19□□□□□ -1.26
CTNNA1-220ENST00000520260 GTF2E1P29083 439 aaPredicted RBP7.19□□□□□ -1.26
CTNNA1-220ENST00000520260 ST5P78524 1137 aa7.19□□□□□ -1.26
CTNNA1-220ENST00000520260 NEXNQ0ZGT2 675 aa7.19□□□□□ -1.26
CTNNA1-220ENST00000520260 DZIP3Q86Y13 1208 aaKnown RBP7.19□□□□□ -1.26
CTNNA1-220ENST00000520260 PROM2Q8N271 834 aa7.19□□□□□ -1.26
CTNNA1-220ENST00000520260 PPP4R2Q9NY27 417 aa7.19□□□□□ -1.26
CTNNA1-220ENST00000520260 NARFQ9UHQ1 456 aa7.19□□□□□ -1.26
CTNNA1-220ENST00000520260 HDAC5Q9UQL6 1122 aa7.19□□□□□ -1.26
CTNNA1-220ENST00000520260 VIRMAQ69YN4 1812 aaKnown RBP7.19□□□□□ -1.26
CTNNA1-220ENST00000520260 PNPLA7Q6ZV29 1317 aa7.19□□□□□ -1.26
CTNNA1-220ENST00000520260 LRP5O75197 1615 aa7.19□□□□□ -1.26
CTNNA1-220ENST00000520260 LAMB4A4D0S4 1761 aa7.18□□□□□ -1.26
CTNNA1-220ENST00000520260 ERVV-1B6SEH8 477 aa7.18□□□□□ -1.26
CTNNA1-220ENST00000520260 EIF2S2P20042 333 aaKnown RBP7.18□□□□□ -1.26
CTNNA1-220ENST00000520260 HNRNPUQ00839 825 aaKnown RBP eCLIP7.18□□□□□ -1.26
CTNNA1-220ENST00000520260 ITPK1Q13572 414 aa7.18□□□□□ -1.26
CTNNA1-220ENST00000520260 ZNF827Q17R98 1081 aa7.18□□□□□ -1.26
CTNNA1-220ENST00000520260 TWISTNBQ3B726 338 aaPredicted RBP7.18□□□□□ -1.26
CTNNA1-220ENST00000520260 PARP10Q53GL7 1025 aa7.18□□□□□ -1.26
CTNNA1-220ENST00000520260 PTF1AQ7RTS3 328 aa7.18□□□□□ -1.26
CTNNA1-220ENST00000520260 PPP1R42Q7Z4L9 355 aa7.18□□□□□ -1.26
CTNNA1-220ENST00000520260 HS3ST6Q96QI5 342 aa7.18□□□□□ -1.26
CTNNA1-220ENST00000520260 SETDB2Q96T68 719 aa7.18□□□□□ -1.26
CTNNA1-220ENST00000520260 ANO8Q9HCE9 1232 aaPredicted RBP7.18□□□□□ -1.26
CTNNA1-220ENST00000520260 DDX21Q9NR30 783 aaKnown RBP eCLIP7.18□□□□□ -1.26
CTNNA1-220ENST00000520260 MBIPQ9NS73 344 aa7.18□□□□□ -1.26
CTNNA1-220ENST00000520260 DLG5Q8TDM6 1919 aa7.18□□□□□ -1.26
CTNNA1-220ENST00000520260 USP42Q9H9J4 1324 aaKnown RBP7.18□□□□□ -1.26
CTNNA1-220ENST00000520260 CARMIL3Q8ND23 1372 aa7.18□□□□□ -1.26
CTNNA1-220ENST00000520260 COL5A3P25940 1745 aaPredicted RBP7.18□□□□□ -1.26
CTNNA1-220ENST00000520260 KDM3BQ7LBC6 1761 aa7.18□□□□□ -1.26
CTNNA1-220ENST00000520260 TAF1LQ8IZX4 1826 aa7.17□□□□□ -1.26
CTNNA1-220ENST00000520260 ZBTB7AO95365 584 aa7.17□□□□□ -1.26
CTNNA1-220ENST00000520260 EMP3P54852 163 aa7.17□□□□□ -1.26
CTNNA1-220ENST00000520260 EIF5P55010 431 aaKnown RBP7.17□□□□□ -1.26
CTNNA1-220ENST00000520260 DUSP27Q5VZP5 1158 aa7.17□□□□□ -1.26
CTNNA1-220ENST00000520260 TPTE2Q6XPS3 522 aa7.17□□□□□ -1.26
CTNNA1-220ENST00000520260 ARHGEF1Q92888 912 aaKnown RBP7.17□□□□□ -1.26
CTNNA1-220ENST00000520260 THUMPD2Q9BTF0 503 aaKnown RBP7.17□□□□□ -1.26
CTNNA1-220ENST00000520260 ZBTB1Q9Y2K1 713 aa7.17□□□□□ -1.26
CTNNA1-220ENST00000520260 SALL2Q9Y467 1007 aaPredicted RBP7.17□□□□□ -1.26
CTNNA1-220ENST00000520260 CD2APQ9Y5K6 639 aa7.17□□□□□ -1.26
CTNNA1-220ENST00000520260 IPO8O15397 1037 aaKnown RBP7.16□□□□□ -1.26
CTNNA1-220ENST00000520260 ZNF853P0CG23 659 aa7.16□□□□□ -1.26
CTNNA1-220ENST00000520260 MS4A1P11836 297 aa7.16□□□□□ -1.26
CTNNA1-220ENST00000520260 PDE6BP35913 854 aa7.16□□□□□ -1.26
CTNNA1-220ENST00000520260 INTS5Q6P9B9 1019 aaKnown RBP7.16□□□□□ -1.26
CTNNA1-220ENST00000520260 COL23A1Q86Y22 540 aaPredicted RBP7.16□□□□□ -1.26
CTNNA1-220ENST00000520260 KLHL34Q8N239 644 aa7.16□□□□□ -1.26
CTNNA1-220ENST00000520260 MIS18AQ9NYP9 233 aa7.16□□□□□ -1.26
CTNNA1-220ENST00000520260 ZBED9Q6R2W3 1325 aa7.16□□□□□ -1.26
CTNNA1-220ENST00000520260 KIF16BQ96L93 1317 aa7.16□□□□□ -1.26
CTNNA1-220ENST00000520260 TJP1Q07157 1748 aa7.15□□□□□ -1.26
CTNNA1-220ENST00000520260 MMP10P09238 476 aa7.15□□□□□ -1.26
CTNNA1-220ENST00000520260 MYL6BP14649 208 aa7.15□□□□□ -1.26
CTNNA1-220ENST00000520260 DEKP35659 375 aaKnown RBP7.15□□□□□ -1.26
CTNNA1-220ENST00000520260 KCNQ4P56696 695 aa7.15□□□□□ -1.26
CTNNA1-220ENST00000520260 TGFB2P61812 414 aa7.15□□□□□ -1.26
CTNNA1-220ENST00000520260 CCDC184Q52MB2 194 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms