RNA–Protein interactions for RNA: ENST00000519860.3

ERGIC1-206, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 3 BASIC

Gene ERGIC1, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-206ENST00000519860 NBPF5PQ86XG9 351 aaPredicted RBP30.04■■■□□ 2.4
ERGIC1-206ENST00000519860 NIP7Q9Y221 180 aaKnown RBP eCLIP30.03■■■□□ 2.4
ERGIC1-206ENST00000519860 FAM177BA6PVY3 158 aa30.02■■■□□ 2.4
ERGIC1-206ENST00000519860 CCDC146Q8IYE0 955 aa30.02■■■□□ 2.4
ERGIC1-206ENST00000519860 RRP7AQ9Y3A4 280 aaKnown RBP30.02■■■□□ 2.4
ERGIC1-206ENST00000519860 PRELPP51888 382 aa30.01■■■□□ 2.39
ERGIC1-206ENST00000519860 HLFQ16534 295 aa30.01■■■□□ 2.39
ERGIC1-206ENST00000519860 PDZRN3Q9UPQ7 1066 aa30.01■■■□□ 2.39
ERGIC1-206ENST00000519860 C21orf2O43822 256 aa30■■■□□ 2.39
ERGIC1-206ENST00000519860 TSPYL4Q9UJ04 414 aa30■■■□□ 2.39
ERGIC1-206ENST00000519860 NFKBIEO00221 500 aa29.99■■■□□ 2.39
ERGIC1-206ENST00000519860 MYL6BP14649 208 aa29.99■■■□□ 2.39
ERGIC1-206ENST00000519860 HSPA6P17066 643 aa29.99■■■□□ 2.39
ERGIC1-206ENST00000519860 LMNB1P20700 586 aa29.99■■■□□ 2.39
ERGIC1-206ENST00000519860 TMPOP42166 694 aaKnown RBP29.99■■■□□ 2.39
ERGIC1-206ENST00000519860 KDM2BQ8NHM5 1336 aa29.97■■■□□ 2.39
ERGIC1-206ENST00000519860 TOMM70O94826 608 aa29.97■■■□□ 2.39
ERGIC1-206ENST00000519860 SRGNP10124 158 aa29.97■■■□□ 2.39
ERGIC1-206ENST00000519860 NEUROD2Q15784 382 aa29.97■■■□□ 2.39
ERGIC1-206ENST00000519860 CEP350Q5VT06 3117 aa29.96■■■□□ 2.39
ERGIC1-206ENST00000519860 WDR43Q15061 677 aaKnown RBP eCLIP29.95■■■□□ 2.39
ERGIC1-206ENST00000519860 STYK1Q6J9G0 422 aa29.95■■■□□ 2.39
ERGIC1-206ENST00000519860 PRPF40BQ6NWY9 871 aaKnown RBP29.95■■■□□ 2.39
ERGIC1-206ENST00000519860 TPTE2Q6XPS3 522 aa29.95■■■□□ 2.39
ERGIC1-206ENST00000519860 TTLL7Q6ZT98 887 aa29.95■■■□□ 2.39
ERGIC1-206ENST00000519860 CACNA1SQ13698 1873 aa29.94■■■□□ 2.38
ERGIC1-206ENST00000519860 CNKSR1Q969H4 720 aa29.94■■■□□ 2.38
ERGIC1-206ENST00000519860 MASTLQ96GX5 879 aa29.94■■■□□ 2.38
ERGIC1-206ENST00000519860 RRAGCQ9HB90 399 aa29.94■■■□□ 2.38
ERGIC1-206ENST00000519860 RGL2O15211 777 aa29.93■■■□□ 2.38
ERGIC1-206ENST00000519860 LMOD3Q0VAK6 560 aa29.93■■■□□ 2.38
ERGIC1-206ENST00000519860 SLX4Q8IY92 1834 aa29.93■■■□□ 2.38
ERGIC1-206ENST00000519860 KIF6Q6ZMV9 814 aa29.92■■■□□ 2.38
ERGIC1-206ENST00000519860 C16orf71Q8IYS4 520 aaPredicted RBP29.92■■■□□ 2.38
ERGIC1-206ENST00000519860 ZBTB3Q9H5J0 574 aa29.92■■■□□ 2.38
ERGIC1-206ENST00000519860 MAP3K15Q6ZN16 1313 aa29.92■■■□□ 2.38
ERGIC1-206ENST00000519860 CCDC88AQ3V6T2 1871 aa29.91■■■□□ 2.38
ERGIC1-206ENST00000519860 GTF2E1P29083 439 aaPredicted RBP29.91■■■□□ 2.38
ERGIC1-206ENST00000519860 TIAM2Q8IVF5 1701 aa29.91■■■□□ 2.38
ERGIC1-206ENST00000519860 ERVV-1B6SEH8 477 aa29.9■■■□□ 2.38
ERGIC1-206ENST00000519860 EIF2S2P20042 333 aaKnown RBP29.9■■■□□ 2.38
ERGIC1-206ENST00000519860 ADAMTS8Q9UP79 889 aa29.9■■■□□ 2.38
ERGIC1-206ENST00000519860 ZC3H4Q9UPT8 1303 aaKnown RBP29.9■■■□□ 2.38
ERGIC1-206ENST00000519860 GPTP24298 496 aa29.89■■■□□ 2.38
ERGIC1-206ENST00000519860 RUNDC1Q96C34 613 aa29.89■■■□□ 2.38
ERGIC1-206ENST00000519860 PRKRIP1Q9H875 184 aaPredicted RBP29.89■■■□□ 2.38
ERGIC1-206ENST00000519860 NPR1P16066 1061 aa29.88■■■□□ 2.37
ERGIC1-206ENST00000519860 TNRC6CQ9HCJ0 1690 aaKnown RBP29.88■■■□□ 2.37
ERGIC1-206ENST00000519860 NUP98P52948 1817 aa29.87■■■□□ 2.37
ERGIC1-206ENST00000519860 FER1L6Q2WGJ9 1857 aa29.87■■■□□ 2.37
ERGIC1-206ENST00000519860 NUTM1Q86Y26 1132 aa29.87■■■□□ 2.37
ERGIC1-206ENST00000519860 NECTIN2Q92692 538 aa29.87■■■□□ 2.37
ERGIC1-206ENST00000519860 LAS1LQ9Y4W2 734 aaKnown RBP29.87■■■□□ 2.37
ERGIC1-206ENST00000519860 KLRG2A4D1S0 409 aaPredicted RBP29.86■■■□□ 2.37
ERGIC1-206ENST00000519860 GLTPD2A6NH11 291 aa29.86■■■□□ 2.37
ERGIC1-206ENST00000519860 ANXA1P04083 346 aa29.86■■■□□ 2.37
ERGIC1-206ENST00000519860 TAOK3Q9H2K8 898 aa29.86■■■□□ 2.37
ERGIC1-206ENST00000519860 ERBB4Q15303 1308 aa29.86■■■□□ 2.37
ERGIC1-206ENST00000519860 ARFGEF2Q9Y6D5 1785 aa29.85■■■□□ 2.37
ERGIC1-206ENST00000519860 PROSER3Q2NL68 480 aa29.85■■■□□ 2.37
ERGIC1-206ENST00000519860 ERFEQ4G0M1 354 aa29.85■■■□□ 2.37
ERGIC1-206ENST00000519860 RBM46Q8TBY0 533 aaKnown RBP29.85■■■□□ 2.37
ERGIC1-206ENST00000519860 BABAM1Q9NWV8 329 aa29.85■■■□□ 2.37
ERGIC1-206ENST00000519860 TRIM35Q9UPQ4 493 aa29.85■■■□□ 2.37
ERGIC1-206ENST00000519860 ABCC12Q96J65 1359 aa29.85■■■□□ 2.37
ERGIC1-206ENST00000519860 PDIA6Q15084 440 aa29.84■■■□□ 2.37
ERGIC1-206ENST00000519860 UBN2Q6ZU65 1347 aa29.84■■■□□ 2.37
ERGIC1-206ENST00000519860 KRT24Q2M2I5 525 aa29.83■■■□□ 2.37
ERGIC1-206ENST00000519860 NYXQ9GZU5 481 aa29.83■■■□□ 2.37
ERGIC1-206ENST00000519860 LTBP3Q9NS15 1303 aa29.82■■■□□ 2.36
ERGIC1-206ENST00000519860 SOGA3Q5TF21 947 aa29.82■■■□□ 2.36
ERGIC1-206ENST00000519860 OLFM4Q6UX06 510 aa29.82■■■□□ 2.36
ERGIC1-206ENST00000519860 LRP10Q7Z4F1 713 aa29.82■■■□□ 2.36
ERGIC1-206ENST00000519860 C7orf43Q8WVR3 580 aa29.82■■■□□ 2.36
ERGIC1-206ENST00000519860 SUSD4Q5VX71 490 aa29.81■■■□□ 2.36
ERGIC1-206ENST00000519860 GIGYF2Q6Y7W6 1299 aaKnown RBP29.81■■■□□ 2.36
ERGIC1-206ENST00000519860 CHL1O00533 1208 aa29.8■■■□□ 2.36
ERGIC1-206ENST00000519860 APLP1P51693 650 aa29.8■■■□□ 2.36
ERGIC1-206ENST00000519860 CCDC93Q567U6 631 aa29.8■■■□□ 2.36
ERGIC1-206ENST00000519860 ZNF34Q8IZ26 560 aa29.79■■■□□ 2.36
ERGIC1-206ENST00000519860 VEGFAP15692 232 aaPredicted RBP29.78■■■□□ 2.36
ERGIC1-206ENST00000519860 DPY19L2Q6NUT2 758 aa29.78■■■□□ 2.36
ERGIC1-206ENST00000519860 DICER1Q9UPY3 1922 aaKnown RBP29.77■■■□□ 2.36
ERGIC1-206ENST00000519860 AIMP1Q12904 312 aaKnown RBP29.77■■■□□ 2.36
ERGIC1-206ENST00000519860 FSTL1Q12841 308 aa29.76■■■□□ 2.35
ERGIC1-206ENST00000519860 CRY2Q49AN0 593 aa29.76■■■□□ 2.35
ERGIC1-206ENST00000519860 NTSR2O95665 410 aa29.75■■■□□ 2.35
ERGIC1-206ENST00000519860 ALDH1B1P30837 517 aa29.75■■■□□ 2.35
ERGIC1-206ENST00000519860 COPS6Q7L5N1 327 aa29.75■■■□□ 2.35
ERGIC1-206ENST00000519860 XAGE3Q8WTP9 111 aa29.75■■■□□ 2.35
ERGIC1-206ENST00000519860 IBTKQ9P2D0 1353 aaPredicted RBP29.75■■■□□ 2.35
ERGIC1-206ENST00000519860 RPGRQ92834 1020 aaKnown RBP29.74■■■□□ 2.35
ERGIC1-206ENST00000519860 ZNF277Q9NRM2 450 aaPredicted RBP29.74■■■□□ 2.35
ERGIC1-206ENST00000519860 POTECB2RU33 542 aa29.73■■■□□ 2.35
ERGIC1-206ENST00000519860 HTRA3P83110 453 aa29.73■■■□□ 2.35
ERGIC1-206ENST00000519860 SMC1BQ8NDV3 1235 aa29.73■■■□□ 2.35
ERGIC1-206ENST00000519860 FKBP4Q02790 459 aaKnown RBP eCLIP29.72■■■□□ 2.35
ERGIC1-206ENST00000519860 PPP1R42Q7Z4L9 355 aa29.72■■■□□ 2.35
ERGIC1-206ENST00000519860 APAF1O14727 1248 aa29.71■■■□□ 2.35
ERGIC1-206ENST00000519860 DDNO94850 711 aaPredicted RBP29.71■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms