RNA–Protein interactions for RNA: ENST00000519848.1

PABPC1-213, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 676 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-213ENST00000519848 SLC52A2Q9HAB3 445 aa11.78□□□□□ -0.52
PABPC1-213ENST00000519848 BCL2L12Q9HB09 334 aa11.78□□□□□ -0.52
PABPC1-213ENST00000519848 USP42Q9H9J4 1324 aaKnown RBP11.78□□□□□ -0.52
PABPC1-213ENST00000519848 DLG5Q8TDM6 1919 aa11.78□□□□□ -0.52
PABPC1-213ENST00000519848 AKAP4Q5JQC9 854 aa11.77□□□□□ -0.53
PABPC1-213ENST00000519848 RC3H1Q5TC82 1133 aaKnown RBP11.77□□□□□ -0.53
PABPC1-213ENST00000519848 PHACTR3Q96KR7 559 aa11.77□□□□□ -0.53
PABPC1-213ENST00000519848 SOS1Q07889 1333 aaPredicted RBP11.77□□□□□ -0.53
PABPC1-213ENST00000519848 A0A0G2JLW4 131 aa11.76□□□□□ -0.53
PABPC1-213ENST00000519848 KCNQ3O43525 872 aa11.76□□□□□ -0.53
PABPC1-213ENST00000519848 HSP90AB1P08238 724 aaKnown RBP11.76□□□□□ -0.53
PABPC1-213ENST00000519848 CYP19A1P11511 503 aaPredicted RBP11.76□□□□□ -0.53
PABPC1-213ENST00000519848 C1orf141Q5JVX7 400 aa11.76□□□□□ -0.53
PABPC1-213ENST00000519848 IL17REQ8NFR9 667 aa11.76□□□□□ -0.53
PABPC1-213ENST00000519848 ZBTB1Q9Y2K1 713 aa11.76□□□□□ -0.53
PABPC1-213ENST00000519848 RTCBQ9Y3I0 505 aaKnown RBP11.76□□□□□ -0.53
PABPC1-213ENST00000519848 DIAPH1O60610 1272 aaKnown RBP11.75□□□□□ -0.53
PABPC1-213ENST00000519848 RSPH6AQ9H0K4 717 aa11.75□□□□□ -0.53
PABPC1-213ENST00000519848 CEMIPQ8WUJ3 1361 aa11.75□□□□□ -0.53
PABPC1-213ENST00000519848 HOXB1P14653 301 aaPredicted RBP11.74□□□□□ -0.53
PABPC1-213ENST00000519848 DPEP1P16444 411 aa11.74□□□□□ -0.53
PABPC1-213ENST00000519848 C1QTNF8P60827 252 aa11.74□□□□□ -0.53
PABPC1-213ENST00000519848 COL15A1P39059 1388 aa11.74□□□□□ -0.53
PABPC1-213ENST00000519848 SBF1O95248 1867 aa11.74□□□□□ -0.53
PABPC1-213ENST00000519848 PRAMEF22A3QJZ6 481 aa11.73□□□□□ -0.53
PABPC1-213ENST00000519848 POLRMTO00411 1230 aaKnown RBP11.73□□□□□ -0.53
PABPC1-213ENST00000519848 PRELPP51888 382 aa11.73□□□□□ -0.53
PABPC1-213ENST00000519848 GOLGA2Q08379 1002 aa11.73□□□□□ -0.53
PABPC1-213ENST00000519848 TRAPPC3LQ5T215 181 aa11.73□□□□□ -0.53
PABPC1-213ENST00000519848 DPY19L2Q6NUT2 758 aa11.73□□□□□ -0.53
PABPC1-213ENST00000519848 KDM3BQ7LBC6 1761 aa11.73□□□□□ -0.53
PABPC1-213ENST00000519848 ZNF526Q8TF50 670 aaPredicted RBP11.73□□□□□ -0.53
PABPC1-213ENST00000519848 ZNF496Q96IT1 587 aaPredicted RBP11.73□□□□□ -0.53
PABPC1-213ENST00000519848 LAMB4A4D0S4 1761 aa11.72□□□□□ -0.53
PABPC1-213ENST00000519848 PPP2R1AP30153 589 aa11.72□□□□□ -0.53
PABPC1-213ENST00000519848 CHRNA5P30532 468 aa11.72□□□□□ -0.53
PABPC1-213ENST00000519848 USPL1Q5W0Q7 1092 aa11.72□□□□□ -0.53
PABPC1-213ENST00000519848 CCDC87Q9NVE4 849 aa11.72□□□□□ -0.53
PABPC1-213ENST00000519848 CACNA1SQ13698 1873 aa11.72□□□□□ -0.53
PABPC1-213ENST00000519848 U2SURPO15042 1029 aaKnown RBP11.71□□□□□ -0.53
PABPC1-213ENST00000519848 TM4SF1P30408 202 aa11.71□□□□□ -0.53
PABPC1-213ENST00000519848 PRKAR2BP31323 418 aa11.71□□□□□ -0.53
PABPC1-213ENST00000519848 PIP4K2AP48426 406 aaPredicted RBP11.71□□□□□ -0.53
PABPC1-213ENST00000519848 TIAM2Q8IVF5 1701 aa11.71□□□□□ -0.54
PABPC1-213ENST00000519848 TNRC6CQ9HCJ0 1690 aaKnown RBP11.71□□□□□ -0.54
PABPC1-213ENST00000519848 HEG1Q9ULI3 1381 aa11.7□□□□□ -0.54
PABPC1-213ENST00000519848 KIF3CO14782 793 aa11.7□□□□□ -0.54
PABPC1-213ENST00000519848 RFC4P35249 363 aa11.7□□□□□ -0.54
PABPC1-213ENST00000519848 DCTN1Q14203 1278 aa11.7□□□□□ -0.54
PABPC1-213ENST00000519848 NFIXQ14938 502 aa11.7□□□□□ -0.54
PABPC1-213ENST00000519848 SENP3-EIF4A1A0A087X0R7 540 aa11.69□□□□□ -0.54
PABPC1-213ENST00000519848 GRIN3BO60391 1043 aa11.69□□□□□ -0.54
PABPC1-213ENST00000519848 GIGYF1O75420 1035 aaPredicted RBP11.69□□□□□ -0.54
PABPC1-213ENST00000519848 ZNF467Q7Z7K2 595 aaPredicted RBP11.69□□□□□ -0.54
PABPC1-213ENST00000519848 NLGN1Q8N2Q7 840 aa11.69□□□□□ -0.54
PABPC1-213ENST00000519848 BCS1LQ9Y276 419 aa11.69□□□□□ -0.54
PABPC1-213ENST00000519848 CCDC24Q8N4L8 307 aa11.68□□□□□ -0.54
PABPC1-213ENST00000519848 CEP350Q5VT06 3117 aa11.67□□□□□ -0.54
PABPC1-213ENST00000519848 CANXP27824 592 aaKnown RBP11.67□□□□□ -0.54
PABPC1-213ENST00000519848 EIF5P55010 431 aaKnown RBP11.67□□□□□ -0.54
PABPC1-213ENST00000519848 RASSF7Q02833 373 aa11.67□□□□□ -0.54
PABPC1-213ENST00000519848 MCM10Q7L590 875 aa11.67□□□□□ -0.54
PABPC1-213ENST00000519848 SLC51AQ86UW1 340 aa11.67□□□□□ -0.54
PABPC1-213ENST00000519848 CCDC88AQ3V6T2 1871 aa11.67□□□□□ -0.54
PABPC1-213ENST00000519848 ARFGEF2Q9Y6D5 1785 aa11.67□□□□□ -0.54
PABPC1-213ENST00000519848 GNAT3A8MTJ3 354 aa11.66□□□□□ -0.54
PABPC1-213ENST00000519848 A1BGP04217 495 aa11.66□□□□□ -0.54
PABPC1-213ENST00000519848 TGFB2P61812 414 aa11.66□□□□□ -0.54
PABPC1-213ENST00000519848 TBC1D9BQ66K14 1250 aa11.66□□□□□ -0.54
PABPC1-213ENST00000519848 ZNF790Q6PG37 636 aa11.66□□□□□ -0.54
PABPC1-213ENST00000519848 NMRK2Q9NPI5 230 aa11.66□□□□□ -0.54
PABPC1-213ENST00000519848 NARFQ9UHQ1 456 aa11.66□□□□□ -0.54
PABPC1-213ENST00000519848 SLX4Q8IY92 1834 aa11.65□□□□□ -0.54
PABPC1-213ENST00000519848 ZNF710Q8N1W2 664 aa11.65□□□□□ -0.54
PABPC1-213ENST00000519848 THUMPD2Q9BTF0 503 aaKnown RBP11.65□□□□□ -0.54
PABPC1-213ENST00000519848 USP16Q9Y5T5 823 aa11.65□□□□□ -0.54
PABPC1-213ENST00000519848 PARP3Q9Y6F1 533 aa11.65□□□□□ -0.54
PABPC1-213ENST00000519848 FER1L6Q2WGJ9 1857 aa11.65□□□□□ -0.54
PABPC1-213ENST00000519848 NBPF26B4DH59 902 aa11.64□□□□□ -0.55
PABPC1-213ENST00000519848 FCHSD2O94868 740 aa11.64□□□□□ -0.55
PABPC1-213ENST00000519848 CAMTA2O94983 1202 aa11.64□□□□□ -0.55
PABPC1-213ENST00000519848 PSEN1P49768 467 aa11.64□□□□□ -0.55
PABPC1-213ENST00000519848 NBPF10Q6P3W6 841 aaKnown RBP11.64□□□□□ -0.55
PABPC1-213ENST00000519848 NBPF15Q8N660 670 aa11.64□□□□□ -0.55
PABPC1-213ENST00000519848 TBC1D2BQ9UPU7 963 aa11.64□□□□□ -0.55
PABPC1-213ENST00000519848 BICDL1Q6ZP65 573 aa11.63□□□□□ -0.55
PABPC1-213ENST00000519848 VSIG10Q8N0Z9 540 aa11.63□□□□□ -0.55
PABPC1-213ENST00000519848 GAS2L2Q8NHY3 880 aa11.63□□□□□ -0.55
PABPC1-213ENST00000519848 PLEKHF1Q96S99 279 aa11.63□□□□□ -0.55
PABPC1-213ENST00000519848 BOLA1Q9Y3E2 137 aa11.63□□□□□ -0.55
PABPC1-213ENST00000519848 SERPINB2P05120 415 aa11.62□□□□□ -0.55
PABPC1-213ENST00000519848 U2AF1L5P0DN76 240 aaPredicted RBP11.62□□□□□ -0.55
PABPC1-213ENST00000519848 U2AF1Q01081 240 aaKnown RBP eCLIP11.62□□□□□ -0.55
PABPC1-213ENST00000519848 VARS2Q5ST30 1063 aaKnown RBP11.62□□□□□ -0.55
PABPC1-213ENST00000519848 C9orf131Q5VYM1 1079 aa11.62□□□□□ -0.55
PABPC1-213ENST00000519848 ARHGAP27Q6ZUM4 889 aa11.62□□□□□ -0.55
PABPC1-213ENST00000519848 GPBP1L1Q9HC44 474 aaPredicted RBP11.62□□□□□ -0.55
PABPC1-213ENST00000519848 MIS18AQ9NYP9 233 aa11.62□□□□□ -0.55
PABPC1-213ENST00000519848 WDR90Q96KV7 1748 aa11.62□□□□□ -0.55
PABPC1-213ENST00000519848 NFKBIEO00221 500 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms