RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 RTN1Q16799 776 aa9.92□□□□□ -0.82
SQLE-203ENST00000518931 FOXR1Q6PIV2 292 aa9.92□□□□□ -0.82
SQLE-203ENST00000518931 LRRC69Q6ZNQ3 347 aa9.92□□□□□ -0.82
SQLE-203ENST00000518931 COL26A1Q96A83 441 aa9.92□□□□□ -0.82
SQLE-203ENST00000518931 ZCCHC2Q9C0B9 1178 aaKnown RBP9.92□□□□□ -0.82
SQLE-203ENST00000518931 GPR25O00155 361 aa9.91□□□□□ -0.82
SQLE-203ENST00000518931 COX20Q5RI15 118 aa9.91□□□□□ -0.82
SQLE-203ENST00000518931 TREML4Q6UXN2 200 aa9.91□□□□□ -0.82
SQLE-203ENST00000518931 ZNF280CQ8ND82 737 aa9.91□□□□□ -0.82
SQLE-203ENST00000518931 SAP130Q9H0E3 1048 aa9.91□□□□□ -0.82
SQLE-203ENST00000518931 SEPT3Q9UH03 358 aa9.91□□□□□ -0.82
SQLE-203ENST00000518931 GPC6Q9Y625 555 aaPredicted RBP9.91□□□□□ -0.82
SQLE-203ENST00000518931 VSIG8P0DPA2 414 aa9.9□□□□□ -0.82
SQLE-203ENST00000518931 UBAP2LQ14157 1087 aaKnown RBP9.9□□□□□ -0.82
SQLE-203ENST00000518931 B4GALNT3Q6L9W6 998 aa9.9□□□□□ -0.82
SQLE-203ENST00000518931 HSH2DQ96JZ2 352 aa9.9□□□□□ -0.82
SQLE-203ENST00000518931 SUSD3Q96L08 255 aa9.9□□□□□ -0.82
SQLE-203ENST00000518931 KLK14Q9P0G3 267 aa9.9□□□□□ -0.82
SQLE-203ENST00000518931 ANKIB1Q9P2G1 1089 aa9.9□□□□□ -0.82
SQLE-203ENST00000518931 LRFN2Q9ULH4 789 aa9.9□□□□□ -0.82
SQLE-203ENST00000518931 DGKZQ13574 1117 aa9.89□□□□□ -0.83
SQLE-203ENST00000518931 C11orf91Q3C1V1 193 aa9.89□□□□□ -0.83
SQLE-203ENST00000518931 C16orf46Q6P387 395 aa9.89□□□□□ -0.83
SQLE-203ENST00000518931 FIGNL1Q6PIW4 674 aa9.89□□□□□ -0.83
SQLE-203ENST00000518931 MYO19Q96H55 970 aa9.89□□□□□ -0.83
SQLE-203ENST00000518931 TRERF1Q96PN7 1200 aa9.89□□□□□ -0.83
SQLE-203ENST00000518931 PCDHGC4Q9Y5F7 938 aa9.89□□□□□ -0.83
SQLE-203ENST00000518931 ATXN7O15265 892 aaPredicted RBP9.88□□□□□ -0.83
SQLE-203ENST00000518931 LCE2CQ5TA81 110 aa9.88□□□□□ -0.83
SQLE-203ENST00000518931 BNIP3LO60238 219 aa9.87□□□□□ -0.83
SQLE-203ENST00000518931 HIF1AQ16665 826 aa9.87□□□□□ -0.83
SQLE-203ENST00000518931 ABHD17AQ96GS6 310 aa9.86□□□□□ -0.83
SQLE-203ENST00000518931 TRAIPQ9BWF2 469 aa9.86□□□□□ -0.83
SQLE-203ENST00000518931 CFHR5Q9BXR6 569 aa9.86□□□□□ -0.83
SQLE-203ENST00000518931 COL25A1Q9BXS0 654 aaPredicted RBP9.86□□□□□ -0.83
SQLE-203ENST00000518931 PHF24Q9UPV7 400 aa9.86□□□□□ -0.83
SQLE-203ENST00000518931 BCS1LQ9Y276 419 aa9.86□□□□□ -0.83
SQLE-203ENST00000518931 KHNYNO15037 678 aaKnown RBP9.85□□□□□ -0.83
SQLE-203ENST00000518931 PDIA4P13667 645 aaKnown RBP9.85□□□□□ -0.83
SQLE-203ENST00000518931 ARID4AP29374 1257 aaPredicted RBP9.85□□□□□ -0.83
SQLE-203ENST00000518931 GMPRP36959 345 aa9.85□□□□□ -0.83
SQLE-203ENST00000518931 SAMD5Q5TGI4 173 aa9.85□□□□□ -0.83
SQLE-203ENST00000518931 GTF3C2Q8WUA4 911 aaPredicted RBP9.85□□□□□ -0.83
SQLE-203ENST00000518931 IFT43Q96FT9 208 aa9.85□□□□□ -0.83
SQLE-203ENST00000518931 CEP63Q96MT8 703 aa9.85□□□□□ -0.83
SQLE-203ENST00000518931 NDFIP2Q9NV92 336 aa9.85□□□□□ -0.83
SQLE-203ENST00000518931 MTMR7Q9Y216 660 aa9.85□□□□□ -0.83
SQLE-203ENST00000518931 DCDC2BA2VCK2 349 aa9.84□□□□□ -0.83
SQLE-203ENST00000518931 BRD1O95696 1058 aa9.84□□□□□ -0.83
SQLE-203ENST00000518931 TNP2Q05952 138 aa9.84□□□□□ -0.83
SQLE-203ENST00000518931 LCE2AQ5TA79 106 aaPredicted RBP9.84□□□□□ -0.83
SQLE-203ENST00000518931 ATXN7L1Q9ULK2 861 aaPredicted RBP9.84□□□□□ -0.83
SQLE-203ENST00000518931 TGFBR3LH3BV60 316 aa9.83□□□□□ -0.84
SQLE-203ENST00000518931 MAPTP10636 758 aaKnown RBP9.83□□□□□ -0.84
SQLE-203ENST00000518931 BRD2P25440 801 aaKnown RBP9.83□□□□□ -0.84
SQLE-203ENST00000518931 BTLAQ7Z6A9 289 aa9.83□□□□□ -0.84
SQLE-203ENST00000518931 ABL1P00519 1130 aa9.82□□□□□ -0.84
SQLE-203ENST00000518931 FAM157BP0CG42 384 aa9.82□□□□□ -0.84
SQLE-203ENST00000518931 GAS6Q14393 721 aa9.82□□□□□ -0.84
SQLE-203ENST00000518931 RNFT1Q5M7Z0 435 aa9.82□□□□□ -0.84
SQLE-203ENST00000518931 CNTNAP3BQ96NU0 1288 aa9.82□□□□□ -0.84
SQLE-203ENST00000518931 CNTNAP3Q9BZ76 1288 aa9.82□□□□□ -0.84
SQLE-203ENST00000518931 DMGDHQ9UI17 866 aaKnown RBP9.82□□□□□ -0.84
SQLE-203ENST00000518931 TNFRSF10BO14763 440 aa9.81□□□□□ -0.84
SQLE-203ENST00000518931 MICAL2O94851 1124 aa9.81□□□□□ -0.84
SQLE-203ENST00000518931 FGFR3P22607 806 aa9.81□□□□□ -0.84
SQLE-203ENST00000518931 KRT76Q01546 638 aa9.81□□□□□ -0.84
SQLE-203ENST00000518931 IER5Q5VY09 327 aa9.81□□□□□ -0.84
SQLE-203ENST00000518931 BRD7Q9NPI1 651 aa9.81□□□□□ -0.84
SQLE-203ENST00000518931 STIM2Q9P246 746 aa9.81□□□□□ -0.84
SQLE-203ENST00000518931 HCN2Q9UL51 889 aa9.81□□□□□ -0.84
SQLE-203ENST00000518931 DNMT3AQ9Y6K1 912 aaPredicted RBP9.81□□□□□ -0.84
SQLE-203ENST00000518931 EFSO43281 561 aa9.8□□□□□ -0.84
SQLE-203ENST00000518931 MX2P20592 715 aa9.8□□□□□ -0.84
SQLE-203ENST00000518931 CTBSQ01459 385 aa9.8□□□□□ -0.84
SQLE-203ENST00000518931 SFSWAPQ12872 951 aaKnown RBP9.8□□□□□ -0.84
SQLE-203ENST00000518931 FAM26DQ5JW98 314 aa9.8□□□□□ -0.84
SQLE-203ENST00000518931 TXNDC2Q86VQ3 553 aa9.8□□□□□ -0.84
SQLE-203ENST00000518931 TREML1Q86YW5 311 aa9.8□□□□□ -0.84
SQLE-203ENST00000518931 ANO2Q9NQ90 1003 aa9.8□□□□□ -0.84
SQLE-203ENST00000518931 STRN4Q9NRL3 753 aa9.8□□□□□ -0.84
SQLE-203ENST00000518931 CD33P20138 364 aa9.79□□□□□ -0.84
SQLE-203ENST00000518931 IDH3AP50213 366 aa9.79□□□□□ -0.84
SQLE-203ENST00000518931 TYRO3Q06418 890 aa9.79□□□□□ -0.84
SQLE-203ENST00000518931 MTMR3Q13615 1198 aa9.79□□□□□ -0.84
SQLE-203ENST00000518931 NPM2Q86SE8 214 aaKnown RBP9.79□□□□□ -0.84
SQLE-203ENST00000518931 ETFBKMTQ8IXQ9 262 aa9.79□□□□□ -0.84
SQLE-203ENST00000518931 HELQQ8TDG4 1101 aa9.79□□□□□ -0.84
SQLE-203ENST00000518931 MARK1Q9P0L2 795 aa9.79□□□□□ -0.84
SQLE-203ENST00000518931 ZBTB39O15060 712 aa9.78□□□□□ -0.84
SQLE-203ENST00000518931 SERPINB4P48594 390 aa9.78□□□□□ -0.84
SQLE-203ENST00000518931 LAMC2Q13753 1193 aa9.78□□□□□ -0.84
SQLE-203ENST00000518931 CCER1Q8TC90 406 aaPredicted RBP9.78□□□□□ -0.84
SQLE-203ENST00000518931 MBIPQ9NS73 344 aa9.78□□□□□ -0.84
SQLE-203ENST00000518931 OPLAHO14841 1288 aa9.77□□□□□ -0.85
SQLE-203ENST00000518931 INPP5BP32019 993 aa9.77□□□□□ -0.85
SQLE-203ENST00000518931 FKBP4Q02790 459 aaKnown RBP eCLIP9.77□□□□□ -0.85
SQLE-203ENST00000518931 KCNH4Q9UQ05 1017 aa9.77□□□□□ -0.85
SQLE-203ENST00000518931 C2CD2LO14523 706 aa9.76□□□□□ -0.85
SQLE-203ENST00000518931 ARSDP51689 593 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms