RNA–Protein interactions for RNA: ENST00000518451.1

HOXA3-203, Transcript of homeobox A3, humanhuman

TSL 4

Gene HOXA3, Length 541 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-203ENST00000518451 TRIM35Q9UPQ4 493 aa24.25■■□□□ 1.47
HOXA3-203ENST00000518451 SCN7AQ01118 1682 aa24.24■■□□□ 1.47
HOXA3-203ENST00000518451 AFDNP55196 1824 aaKnown RBP24.24■■□□□ 1.47
HOXA3-203ENST00000518451 CHL1O00533 1208 aa24.24■■□□□ 1.47
HOXA3-203ENST00000518451 MYL6BP14649 208 aa24.24■■□□□ 1.47
HOXA3-203ENST00000518451 ZNF622Q969S3 477 aaKnown RBP eCLIP24.24■■□□□ 1.47
HOXA3-203ENST00000518451 KDM3BQ7LBC6 1761 aa24.24■■□□□ 1.47
HOXA3-203ENST00000518451 ZNF526Q8TF50 670 aaPredicted RBP24.23■■□□□ 1.47
HOXA3-203ENST00000518451 LAS1LQ9Y4W2 734 aaKnown RBP24.23■■□□□ 1.47
HOXA3-203ENST00000518451 MAP3K15Q6ZN16 1313 aa24.22■■□□□ 1.47
HOXA3-203ENST00000518451 EIF2S2P20042 333 aaKnown RBP24.22■■□□□ 1.47
HOXA3-203ENST00000518451 GTF2E1P29083 439 aaPredicted RBP24.22■■□□□ 1.47
HOXA3-203ENST00000518451 C9orf131Q5VYM1 1079 aa24.22■■□□□ 1.47
HOXA3-203ENST00000518451 CCDC24Q8N4L8 307 aa24.22■■□□□ 1.47
HOXA3-203ENST00000518451 CALD1Q05682 793 aaKnown RBP24.21■■□□□ 1.47
HOXA3-203ENST00000518451 HLFQ16534 295 aa24.21■■□□□ 1.47
HOXA3-203ENST00000518451 CNKSR1Q969H4 720 aa24.21■■□□□ 1.47
HOXA3-203ENST00000518451 BRCA1P38398 1863 aaKnown RBP24.21■■□□□ 1.47
HOXA3-203ENST00000518451 STYK1Q6J9G0 422 aa24.2■■□□□ 1.46
HOXA3-203ENST00000518451 NYXQ9GZU5 481 aa24.2■■□□□ 1.46
HOXA3-203ENST00000518451 APAF1O14727 1248 aa24.19■■□□□ 1.46
HOXA3-203ENST00000518451 MASTLQ96GX5 879 aa24.19■■□□□ 1.46
HOXA3-203ENST00000518451 CFAP44Q96MT7 982 aa24.19■■□□□ 1.46
HOXA3-203ENST00000518451 ARFGEF1Q9Y6D6 1849 aa24.19■■□□□ 1.46
HOXA3-203ENST00000518451 ANP32CO43423 234 aa24.18■■□□□ 1.46
HOXA3-203ENST00000518451 SRGNP10124 158 aa24.18■■□□□ 1.46
HOXA3-203ENST00000518451 TTLL7Q6ZT98 887 aa24.18■■□□□ 1.46
HOXA3-203ENST00000518451 RNF181Q9P0P0 153 aa24.18■■□□□ 1.46
HOXA3-203ENST00000518451 LAMB4A4D0S4 1761 aa24.18■■□□□ 1.46
HOXA3-203ENST00000518451 ZBTB3Q9H5J0 574 aa24.17■■□□□ 1.46
HOXA3-203ENST00000518451 BCORQ6W2J9 1755 aa24.16■■□□□ 1.46
HOXA3-203ENST00000518451 FAM177BA6PVY3 158 aa24.16■■□□□ 1.46
HOXA3-203ENST00000518451 KLRG2A4D1S0 409 aaPredicted RBP24.15■■□□□ 1.46
HOXA3-203ENST00000518451 HOXB7P09629 217 aa24.15■■□□□ 1.46
HOXA3-203ENST00000518451 LMNB1P20700 586 aa24.15■■□□□ 1.46
HOXA3-203ENST00000518451 PDIA6Q15084 440 aa24.15■■□□□ 1.46
HOXA3-203ENST00000518451 SOGA3Q5TF21 947 aa24.15■■□□□ 1.46
HOXA3-203ENST00000518451 GIGYF2Q6Y7W6 1299 aaKnown RBP24.15■■□□□ 1.46
HOXA3-203ENST00000518451 C21orf2O43822 256 aa24.14■■□□□ 1.45
HOXA3-203ENST00000518451 NPR1P16066 1061 aa24.14■■□□□ 1.45
HOXA3-203ENST00000518451 GNAI1P63096 354 aa24.13■■□□□ 1.45
HOXA3-203ENST00000518451 DDX21Q9NR30 783 aaKnown RBP eCLIP24.13■■□□□ 1.45
HOXA3-203ENST00000518451 KDM2BQ8NHM5 1336 aa24.12■■□□□ 1.45
HOXA3-203ENST00000518451 ZC3H4Q9UPT8 1303 aaKnown RBP24.12■■□□□ 1.45
HOXA3-203ENST00000518451 PARP10Q53GL7 1025 aa24.12■■□□□ 1.45
HOXA3-203ENST00000518451 PPP1R42Q7Z4L9 355 aa24.12■■□□□ 1.45
HOXA3-203ENST00000518451 ZNF34Q8IZ26 560 aa24.12■■□□□ 1.45
HOXA3-203ENST00000518451 NECTIN2Q92692 538 aa24.12■■□□□ 1.45
HOXA3-203ENST00000518451 IFT57Q9NWB7 429 aa24.12■■□□□ 1.45
HOXA3-203ENST00000518451 ALDH1B1P30837 517 aa24.11■■□□□ 1.45
HOXA3-203ENST00000518451 PRPF40BQ6NWY9 871 aaKnown RBP24.11■■□□□ 1.45
HOXA3-203ENST00000518451 COPS6Q7L5N1 327 aa24.11■■□□□ 1.45
HOXA3-203ENST00000518451 LRP10Q7Z4F1 713 aa24.11■■□□□ 1.45
HOXA3-203ENST00000518451 CHMP4AQ9BY43 222 aa24.11■■□□□ 1.45
HOXA3-203ENST00000518451 ZNF219Q9P2Y4 722 aaPredicted RBP24.11■■□□□ 1.45
HOXA3-203ENST00000518451 ZNF853P0CG23 659 aa24.1■■□□□ 1.45
HOXA3-203ENST00000518451 GPTP24298 496 aa24.1■■□□□ 1.45
HOXA3-203ENST00000518451 RASSF7Q02833 373 aa24.1■■□□□ 1.45
HOXA3-203ENST00000518451 HSP90AB3PQ58FF7 597 aa24.1■■□□□ 1.45
HOXA3-203ENST00000518451 HDGFL1Q5TGJ6 251 aa24.1■■□□□ 1.45
HOXA3-203ENST00000518451 MBIPQ9NS73 344 aa24.1■■□□□ 1.45
HOXA3-203ENST00000518451 DBF4Q9UBU7 674 aaPredicted RBP24.1■■□□□ 1.45
HOXA3-203ENST00000518451 DLEC1Q9Y238 1755 aa24.1■■□□□ 1.45
HOXA3-203ENST00000518451 AIMP1Q12904 312 aaKnown RBP24.09■■□□□ 1.45
HOXA3-203ENST00000518451 KRT24Q2M2I5 525 aa24.09■■□□□ 1.45
HOXA3-203ENST00000518451 PROSER3Q2NL68 480 aa24.09■■□□□ 1.45
HOXA3-203ENST00000518451 MRS2Q9HD23 443 aa24.09■■□□□ 1.45
HOXA3-203ENST00000518451 IBTKQ9P2D0 1353 aaPredicted RBP24.08■■□□□ 1.45
HOXA3-203ENST00000518451 SENP3-EIF4A1A0A087X0R7 540 aa24.08■■□□□ 1.45
HOXA3-203ENST00000518451 NFKBIEO00221 500 aa24.08■■□□□ 1.45
HOXA3-203ENST00000518451 ANXA1P04083 346 aa24.08■■□□□ 1.45
HOXA3-203ENST00000518451 CCDC184Q52MB2 194 aa24.08■■□□□ 1.45
HOXA3-203ENST00000518451 SUSD4Q5VX71 490 aa24.08■■□□□ 1.45
HOXA3-203ENST00000518451 DUSP27Q5VZP5 1158 aa24.08■■□□□ 1.45
HOXA3-203ENST00000518451 XAGE3Q8WTP9 111 aa24.08■■□□□ 1.45
HOXA3-203ENST00000518451 ANKRD31Q8N7Z5 1873 aa24.08■■□□□ 1.45
HOXA3-203ENST00000518451 KIF3CO14782 793 aa24.07■■□□□ 1.44
HOXA3-203ENST00000518451 ERFEQ4G0M1 354 aa24.07■■□□□ 1.44
HOXA3-203ENST00000518451 NUTM1Q86Y26 1132 aa24.07■■□□□ 1.44
HOXA3-203ENST00000518451 TAOK3Q9H2K8 898 aa24.06■■□□□ 1.44
HOXA3-203ENST00000518451 HYPKQ9NX55 129 aa24.06■■□□□ 1.44
HOXA3-203ENST00000518451 CHPF2Q9P2E5 772 aa24.06■■□□□ 1.44
HOXA3-203ENST00000518451 UBN2Q6ZU65 1347 aa24.06■■□□□ 1.44
HOXA3-203ENST00000518451 LTBP3Q9NS15 1303 aa24.06■■□□□ 1.44
HOXA3-203ENST00000518451 C16orf71Q8IYS4 520 aaPredicted RBP24.05■■□□□ 1.44
HOXA3-203ENST00000518451 UTP14AQ9BVJ6 771 aaKnown RBP24.05■■□□□ 1.44
HOXA3-203ENST00000518451 TOMM70O94826 608 aa24.04■■□□□ 1.44
HOXA3-203ENST00000518451 CCDC27Q2M243 656 aa24.04■■□□□ 1.44
HOXA3-203ENST00000518451 CRY2Q49AN0 593 aa24.04■■□□□ 1.44
HOXA3-203ENST00000518451 NCBP3Q53F19 620 aaKnown RBP24.04■■□□□ 1.44
HOXA3-203ENST00000518451 CCDC93Q567U6 631 aa24.04■■□□□ 1.44
HOXA3-203ENST00000518451 DPY19L2Q6NUT2 758 aa24.04■■□□□ 1.44
HOXA3-203ENST00000518451 C7orf43Q8WVR3 580 aa24.04■■□□□ 1.44
HOXA3-203ENST00000518451 RPGRQ92834 1020 aaKnown RBP24.04■■□□□ 1.44
HOXA3-203ENST00000518451 NMRK2Q9NPI5 230 aa24.04■■□□□ 1.44
HOXA3-203ENST00000518451 RNF123Q5XPI4 1314 aa24.04■■□□□ 1.44
HOXA3-203ENST00000518451 NTSR2O95665 410 aa24.03■■□□□ 1.44
HOXA3-203ENST00000518451 TCIRG1Q13488 830 aa24.03■■□□□ 1.44
HOXA3-203ENST00000518451 ANKRD13DQ6ZTN6 518 aa24.03■■□□□ 1.44
HOXA3-203ENST00000518451 RTKN2Q8IZC4 609 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms