RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 SLC27A3Q5K4L6 730 aa8.84□□□□□ -0.99
CTNNA1-202ENST00000517533 ZNF280CQ8ND82 737 aa8.84□□□□□ -0.99
CTNNA1-202ENST00000517533 IFT43Q96FT9 208 aa8.84□□□□□ -0.99
CTNNA1-202ENST00000517533 TSEN34Q9BSV6 310 aaKnown RBP8.84□□□□□ -0.99
CTNNA1-202ENST00000517533 CHMP3Q9Y3E7 222 aa8.84□□□□□ -0.99
CTNNA1-202ENST00000517533 NDUFB5O43674 189 aa8.83□□□□□ -1
CTNNA1-202ENST00000517533 POU4F2Q12837 409 aa8.83□□□□□ -1
CTNNA1-202ENST00000517533 C1orf53Q5VUE5 145 aa8.83□□□□□ -1
CTNNA1-202ENST00000517533 ABTB2Q8N961 1025 aa8.83□□□□□ -1
CTNNA1-202ENST00000517533 RNF217Q8TC41 542 aa8.83□□□□□ -1
CTNNA1-202ENST00000517533 POLMQ9NP87 494 aaPredicted RBP8.83□□□□□ -1
CTNNA1-202ENST00000517533 SPATA31C2B4DYI2 1134 aa8.82□□□□□ -1
CTNNA1-202ENST00000517533 ATP4AP20648 1035 aa8.82□□□□□ -1
CTNNA1-202ENST00000517533 ZAP70P43403 619 aa8.82□□□□□ -1
CTNNA1-202ENST00000517533 AAMPQ13685 434 aa8.82□□□□□ -1
CTNNA1-202ENST00000517533 C6orf118Q5T5N4 469 aa8.82□□□□□ -1
CTNNA1-202ENST00000517533 PRICKLE2Q7Z3G6 844 aa8.82□□□□□ -1
CTNNA1-202ENST00000517533 TREML1Q86YW5 311 aa8.82□□□□□ -1
CTNNA1-202ENST00000517533 GJD3Q8N144 294 aa8.82□□□□□ -1
CTNNA1-202ENST00000517533 EDEM1Q92611 657 aa8.82□□□□□ -1
CTNNA1-202ENST00000517533 HSH2DQ96JZ2 352 aa8.82□□□□□ -1
CTNNA1-202ENST00000517533 DMGDHQ9UI17 866 aaKnown RBP8.82□□□□□ -1
CTNNA1-202ENST00000517533 WWC3Q9ULE0 1092 aa8.82□□□□□ -1
CTNNA1-202ENST00000517533 A6NHS1 94 aa8.81□□□□□ -1
CTNNA1-202ENST00000517533 PDGFAP04085 211 aa8.81□□□□□ -1
CTNNA1-202ENST00000517533 DNM1Q05193 864 aaKnown RBP8.81□□□□□ -1
CTNNA1-202ENST00000517533 COL19A1Q14993 1142 aa8.81□□□□□ -1
CTNNA1-202ENST00000517533 GNASQ5JWF2 1037 aa8.81□□□□□ -1
CTNNA1-202ENST00000517533 ALKBH2Q6NS38 261 aa8.81□□□□□ -1
CTNNA1-202ENST00000517533 OPLAHO14841 1288 aa8.8□□□□□ -1
CTNNA1-202ENST00000517533 BMP1P13497 986 aa8.8□□□□□ -1
CTNNA1-202ENST00000517533 RHOQP17081 205 aa8.8□□□□□ -1
CTNNA1-202ENST00000517533 EHHADHQ08426 723 aa8.8□□□□□ -1
CTNNA1-202ENST00000517533 EAPPQ56P03 285 aaPredicted RBP8.8□□□□□ -1
CTNNA1-202ENST00000517533 NBPF10Q6P3W6 841 aaKnown RBP8.8□□□□□ -1
CTNNA1-202ENST00000517533 TRIM46Q7Z4K8 759 aa8.8□□□□□ -1
CTNNA1-202ENST00000517533 AIDAQ96BJ3 306 aa8.8□□□□□ -1
CTNNA1-202ENST00000517533 CITED4Q96RK1 184 aa8.8□□□□□ -1
CTNNA1-202ENST00000517533 GGNBP2Q9H3C7 697 aa8.8□□□□□ -1
CTNNA1-202ENST00000517533 BMP2P12643 396 aa8.79□□□□□ -1
CTNNA1-202ENST00000517533 MZF1P28698 734 aaPredicted RBP8.79□□□□□ -1
CTNNA1-202ENST00000517533 GRNP28799 593 aaKnown RBP8.79□□□□□ -1
CTNNA1-202ENST00000517533 MRPL14Q6P1L8 145 aaKnown RBP8.79□□□□□ -1
CTNNA1-202ENST00000517533 TMC1Q8TDI8 760 aa8.79□□□□□ -1
CTNNA1-202ENST00000517533 GPR152Q8TDT2 470 aa8.79□□□□□ -1
CTNNA1-202ENST00000517533 SUSD3Q96L08 255 aa8.79□□□□□ -1
CTNNA1-202ENST00000517533 PDZRN3Q9UPQ7 1066 aa8.79□□□□□ -1
CTNNA1-202ENST00000517533 USP20Q9Y2K6 914 aa8.79□□□□□ -1
CTNNA1-202ENST00000517533 MICAL2O94851 1124 aa8.78□□□□□ -1
CTNNA1-202ENST00000517533 RECKO95980 971 aa8.78□□□□□ -1
CTNNA1-202ENST00000517533 ZNF326Q5BKZ1 582 aaKnown RBP8.78□□□□□ -1
CTNNA1-202ENST00000517533 LDLRAD1Q5T700 205 aa8.78□□□□□ -1
CTNNA1-202ENST00000517533 RHPN1Q8TCX5 695 aa8.78□□□□□ -1
CTNNA1-202ENST00000517533 CFHR5Q9BXR6 569 aa8.78□□□□□ -1
CTNNA1-202ENST00000517533 NIF3L1Q9GZT8 377 aa8.78□□□□□ -1
CTNNA1-202ENST00000517533 AVPP01185 164 aa8.77□□□□□ -1.01
CTNNA1-202ENST00000517533 MAPK8P45983 427 aa8.77□□□□□ -1.01
CTNNA1-202ENST00000517533 NUDT16Q96DE0 195 aaKnown RBP8.77□□□□□ -1.01
CTNNA1-202ENST00000517533 FAM161BQ96MY7 647 aa8.77□□□□□ -1.01
CTNNA1-202ENST00000517533 ZDHHC3Q9NYG2 299 aa8.77□□□□□ -1.01
CTNNA1-202ENST00000517533 FAM187AA6NFU0 413 aa8.76□□□□□ -1.01
CTNNA1-202ENST00000517533 FIGNL2A6NMB9 653 aa8.76□□□□□ -1.01
CTNNA1-202ENST00000517533 TGFBR3LH3BV60 316 aa8.76□□□□□ -1.01
CTNNA1-202ENST00000517533 PLCB3Q01970 1234 aa8.76□□□□□ -1.01
CTNNA1-202ENST00000517533 MRPL58Q14197 206 aaKnown RBP8.76□□□□□ -1.01
CTNNA1-202ENST00000517533 ALKBH8Q96BT7 664 aaKnown RBP8.76□□□□□ -1.01
CTNNA1-202ENST00000517533 DMRTB1Q96MA1 342 aa8.76□□□□□ -1.01
CTNNA1-202ENST00000517533 ZIC5Q96T25 663 aa8.76□□□□□ -1.01
CTNNA1-202ENST00000517533 SOS2Q07890 1332 aaPredicted RBP8.76□□□□□ -1.01
CTNNA1-202ENST00000517533 VAMP1P23763 118 aa8.75□□□□□ -1.01
CTNNA1-202ENST00000517533 MSX1P28360 303 aa8.75□□□□□ -1.01
CTNNA1-202ENST00000517533 GTF2E1P29083 439 aaPredicted RBP8.75□□□□□ -1.01
CTNNA1-202ENST00000517533 ORC1Q13415 861 aa8.75□□□□□ -1.01
CTNNA1-202ENST00000517533 LYSMD3Q7Z3D4 306 aa8.75□□□□□ -1.01
CTNNA1-202ENST00000517533 FAM177A1Q8N128 213 aaPredicted RBP8.75□□□□□ -1.01
CTNNA1-202ENST00000517533 LDHBP07195 334 aaKnown RBP8.74□□□□□ -1.01
CTNNA1-202ENST00000517533 IDH3AP50213 366 aa8.74□□□□□ -1.01
CTNNA1-202ENST00000517533 TRIP4Q15650 581 aaPredicted RBP8.74□□□□□ -1.01
CTNNA1-202ENST00000517533 NBPF1Q3BBV0 1214 aa8.74□□□□□ -1.01
CTNNA1-202ENST00000517533 DUSP9Q99956 384 aaKnown RBP8.74□□□□□ -1.01
CTNNA1-202ENST00000517533 TTLL8A6PVC2 850 aa8.73□□□□□ -1.01
CTNNA1-202ENST00000517533 UPP2O95045 317 aa8.73□□□□□ -1.01
CTNNA1-202ENST00000517533 INPP5BP32019 993 aa8.73□□□□□ -1.01
CTNNA1-202ENST00000517533 PDE3BQ13370 1112 aa8.73□□□□□ -1.01
CTNNA1-202ENST00000517533 ENOX2Q16206 610 aaKnown RBP8.73□□□□□ -1.01
CTNNA1-202ENST00000517533 LRRC69Q6ZNQ3 347 aa8.73□□□□□ -1.01
CTNNA1-202ENST00000517533 PARP2Q9UGN5 583 aa8.73□□□□□ -1.01
CTNNA1-202ENST00000517533 DNMT3LQ9UJW3 386 aa8.73□□□□□ -1.01
CTNNA1-202ENST00000517533 PNMA6FA0A0J9YX94 578 aa8.72□□□□□ -1.01
CTNNA1-202ENST00000517533 IER5Q5VY09 327 aa8.72□□□□□ -1.01
CTNNA1-202ENST00000517533 ZFP42Q96MM3 310 aa8.72□□□□□ -1.01
CTNNA1-202ENST00000517533 TIMMDC1Q9NPL8 285 aa8.72□□□□□ -1.01
CTNNA1-202ENST00000517533 KCNMB2Q9Y691 235 aa8.72□□□□□ -1.01
CTNNA1-202ENST00000517533 PRPF40AO75400 957 aaKnown RBP8.71□□□□□ -1.02
CTNNA1-202ENST00000517533 THBS1P07996 1170 aa8.71□□□□□ -1.02
CTNNA1-202ENST00000517533 TATP17735 454 aaPredicted RBP8.71□□□□□ -1.02
CTNNA1-202ENST00000517533 C8orf34Q49A92 452 aa8.71□□□□□ -1.02
CTNNA1-202ENST00000517533 WDR44Q5JSH3 913 aa8.71□□□□□ -1.02
CTNNA1-202ENST00000517533 BTLAQ7Z6A9 289 aa8.71□□□□□ -1.02
CTNNA1-202ENST00000517533 BACH2Q9BYV9 841 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms