RNA–Protein interactions for RNA: ENST00000517403.5

PABPC1-202, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-202ENST00000517403 PRR5LQ6MZQ0 368 aa11.61□□□□□ -0.55
PABPC1-202ENST00000517403 COL4A5P29400 1685 aa11.61□□□□□ -0.55
PABPC1-202ENST00000517403 COL4A1P02462 1669 aa11.6□□□□□ -0.55
PABPC1-202ENST00000517403 ZPR1O75312 459 aa11.6□□□□□ -0.55
PABPC1-202ENST00000517403 ECM2O94769 699 aaPredicted RBP11.6□□□□□ -0.55
PABPC1-202ENST00000517403 ZNF330Q9Y3S2 320 aaPredicted RBP11.6□□□□□ -0.55
PABPC1-202ENST00000517403 DICER1Q9UPY3 1922 aaKnown RBP11.6□□□□□ -0.55
PABPC1-202ENST00000517403 NUP98P52948 1817 aa11.6□□□□□ -0.55
PABPC1-202ENST00000517403 SNED1Q8TER0 1413 aa11.6□□□□□ -0.55
PABPC1-202ENST00000517403 ABCC12Q96J65 1359 aa11.59□□□□□ -0.55
PABPC1-202ENST00000517403 BTBD11A6QL63 1104 aa11.59□□□□□ -0.55
PABPC1-202ENST00000517403 HTRA3P83110 453 aa11.59□□□□□ -0.55
PABPC1-202ENST00000517403 POLA2Q14181 598 aa11.59□□□□□ -0.55
PABPC1-202ENST00000517403 TTC5Q8N0Z6 440 aa11.59□□□□□ -0.55
PABPC1-202ENST00000517403 PIM2Q9P1W9 311 aa11.59□□□□□ -0.55
PABPC1-202ENST00000517403 HMGB2P26583 209 aaKnown RBP11.58□□□□□ -0.56
PABPC1-202ENST00000517403 DALRD3Q5D0E6 543 aaKnown RBP11.58□□□□□ -0.56
PABPC1-202ENST00000517403 BBXQ8WY36 941 aaPredicted RBP11.58□□□□□ -0.56
PABPC1-202ENST00000517403 FMNL2Q96PY5 1086 aa11.58□□□□□ -0.56
PABPC1-202ENST00000517403 IL6STP40189 918 aaPredicted RBP11.57□□□□□ -0.56
PABPC1-202ENST00000517403 HLFQ16534 295 aa11.57□□□□□ -0.56
PABPC1-202ENST00000517403 OLFM4Q6UX06 510 aa11.57□□□□□ -0.56
PABPC1-202ENST00000517403 C2CD5Q86YS7 1000 aa11.57□□□□□ -0.56
PABPC1-202ENST00000517403 CFAP53Q96M91 514 aa11.57□□□□□ -0.56
PABPC1-202ENST00000517403 RNF181Q9P0P0 153 aa11.57□□□□□ -0.56
PABPC1-202ENST00000517403 LAMB2P55268 1798 aa11.56□□□□□ -0.56
PABPC1-202ENST00000517403 HSPA6P17066 643 aa11.56□□□□□ -0.56
PABPC1-202ENST00000517403 LRP10Q7Z4F1 713 aa11.56□□□□□ -0.56
PABPC1-202ENST00000517403 DZIP3Q86Y13 1208 aaKnown RBP11.56□□□□□ -0.56
PABPC1-202ENST00000517403 SPINK5Q9NQ38 1064 aaPredicted RBP11.56□□□□□ -0.56
PABPC1-202ENST00000517403 ANKRD36CQ5JPF3 1778 aa11.55□□□□□ -0.56
PABPC1-202ENST00000517403 POTECB2RU33 542 aa11.55□□□□□ -0.56
PABPC1-202ENST00000517403 STARD3NLO95772 234 aa11.55□□□□□ -0.56
PABPC1-202ENST00000517403 UBN2Q6ZU65 1347 aa11.55□□□□□ -0.56
PABPC1-202ENST00000517403 KRT24Q2M2I5 525 aa11.54□□□□□ -0.56
PABPC1-202ENST00000517403 TTLL7Q6ZT98 887 aa11.54□□□□□ -0.56
PABPC1-202ENST00000517403 SPOCK2Q92563 424 aa11.54□□□□□ -0.56
PABPC1-202ENST00000517403 LTBP1Q14766 1721 aa11.53□□□□□ -0.56
PABPC1-202ENST00000517403 C21orf2O43822 256 aa11.53□□□□□ -0.56
PABPC1-202ENST00000517403 EIF4A1P60842 406 aaKnown RBP11.53□□□□□ -0.56
PABPC1-202ENST00000517403 NFE2L2Q16236 605 aa11.53□□□□□ -0.56
PABPC1-202ENST00000517403 PROSER3Q2NL68 480 aa11.53□□□□□ -0.56
PABPC1-202ENST00000517403 C3orf67Q6ZVT6 689 aa11.53□□□□□ -0.56
PABPC1-202ENST00000517403 ADAMTSL1Q8N6G6 1762 aa11.52□□□□□ -0.57
PABPC1-202ENST00000517403 ANXA1P04083 346 aa11.52□□□□□ -0.57
PABPC1-202ENST00000517403 SNRPA1P09661 255 aaKnown RBP11.52□□□□□ -0.57
PABPC1-202ENST00000517403 SRGNP10124 158 aa11.52□□□□□ -0.57
PABPC1-202ENST00000517403 PDIA6Q15084 440 aa11.52□□□□□ -0.57
PABPC1-202ENST00000517403 DNAJC5GQ8N7S2 189 aa11.52□□□□□ -0.57
PABPC1-202ENST00000517403 TTLL6Q8N841 843 aa11.52□□□□□ -0.57
PABPC1-202ENST00000517403 C7orf43Q8WVR3 580 aa11.52□□□□□ -0.57
PABPC1-202ENST00000517403 NUDCQ9Y266 331 aa11.52□□□□□ -0.57
PABPC1-202ENST00000517403 RRP7AQ9Y3A4 280 aaKnown RBP11.52□□□□□ -0.57
PABPC1-202ENST00000517403 TAF1P21675 1872 aa11.52□□□□□ -0.57
PABPC1-202ENST00000517403 A0A087WZG4 1122 aa11.51□□□□□ -0.57
PABPC1-202ENST00000517403 POTEIP0CG38 1075 aa11.51□□□□□ -0.57
PABPC1-202ENST00000517403 POTEJP0CG39 1038 aa11.51□□□□□ -0.57
PABPC1-202ENST00000517403 TAF7Q15545 349 aaPredicted RBP11.51□□□□□ -0.57
PABPC1-202ENST00000517403 PRPF40BQ6NWY9 871 aaKnown RBP11.51□□□□□ -0.57
PABPC1-202ENST00000517403 CCDC146Q8IYE0 955 aa11.51□□□□□ -0.57
PABPC1-202ENST00000517403 CNBD1Q8NA66 436 aa11.51□□□□□ -0.57
PABPC1-202ENST00000517403 BRIP1Q9BX63 1249 aa11.51□□□□□ -0.57
PABPC1-202ENST00000517403 RRAGCQ9HB90 399 aa11.51□□□□□ -0.57
PABPC1-202ENST00000517403 DDX60Q8IY21 1712 aaKnown RBP11.5□□□□□ -0.57
PABPC1-202ENST00000517403 FAM177BA6PVY3 158 aa11.5□□□□□ -0.57
PABPC1-202ENST00000517403 HTATSF1O43719 755 aaKnown RBP11.5□□□□□ -0.57
PABPC1-202ENST00000517403 DDX10Q13206 875 aaKnown RBP11.5□□□□□ -0.57
PABPC1-202ENST00000517403 NUTM1Q86Y26 1132 aa11.5□□□□□ -0.57
PABPC1-202ENST00000517403 ZNF622Q969S3 477 aaKnown RBP eCLIP11.5□□□□□ -0.57
PABPC1-202ENST00000517403 TEX13AQ9BXU3 409 aaPredicted RBP11.5□□□□□ -0.57
PABPC1-202ENST00000517403 TOMM70O94826 608 aa11.49□□□□□ -0.57
PABPC1-202ENST00000517403 LMNB1P20700 586 aa11.49□□□□□ -0.57
PABPC1-202ENST00000517403 NGEFQ8N5V2 710 aa11.49□□□□□ -0.57
PABPC1-202ENST00000517403 RTF1Q92541 710 aaKnown RBP11.49□□□□□ -0.57
PABPC1-202ENST00000517403 ZNF541Q9H0D2 1346 aa11.49□□□□□ -0.57
PABPC1-202ENST00000517403 DUOX1Q9NRD9 1551 aa11.49□□□□□ -0.57
PABPC1-202ENST00000517403 KLRG2A4D1S0 409 aaPredicted RBP11.48□□□□□ -0.57
PABPC1-202ENST00000517403 H0YIN7 160 aa11.48□□□□□ -0.57
PABPC1-202ENST00000517403 CAPN15O75808 1086 aa11.48□□□□□ -0.57
PABPC1-202ENST00000517403 CCDC184Q52MB2 194 aa11.48□□□□□ -0.57
PABPC1-202ENST00000517403 ZNF428Q96B54 188 aa11.48□□□□□ -0.57
PABPC1-202ENST00000517403 TSHZ2Q9NRE2 1034 aa11.48□□□□□ -0.57
PABPC1-202ENST00000517403 TRIM35Q9UPQ4 493 aa11.48□□□□□ -0.57
PABPC1-202ENST00000517403 NIP7Q9Y221 180 aaKnown RBP eCLIP11.48□□□□□ -0.57
PABPC1-202ENST00000517403 RIC1Q4ADV7 1423 aa11.48□□□□□ -0.57
PABPC1-202ENST00000517403 MAP3K15Q6ZN16 1313 aa11.47□□□□□ -0.57
PABPC1-202ENST00000517403 LTBP3Q9NS15 1303 aa11.47□□□□□ -0.57
PABPC1-202ENST00000517403 RGL2O15211 777 aa11.47□□□□□ -0.57
PABPC1-202ENST00000517403 MYL6BP14649 208 aa11.47□□□□□ -0.57
PABPC1-202ENST00000517403 GPTP24298 496 aa11.47□□□□□ -0.57
PABPC1-202ENST00000517403 TMPOP42166 694 aaKnown RBP11.47□□□□□ -0.57
PABPC1-202ENST00000517403 ERFEQ4G0M1 354 aa11.47□□□□□ -0.57
PABPC1-202ENST00000517403 STYK1Q6J9G0 422 aa11.47□□□□□ -0.57
PABPC1-202ENST00000517403 SETDB2Q96T68 719 aa11.47□□□□□ -0.57
PABPC1-202ENST00000517403 ZBTB3Q9H5J0 574 aa11.47□□□□□ -0.57
PABPC1-202ENST00000517403 LRRC37AA6NMS7 1700 aa11.46□□□□□ -0.57
PABPC1-202ENST00000517403 GLTPD2A6NH11 291 aa11.46□□□□□ -0.57
PABPC1-202ENST00000517403 NTSR2O95665 410 aa11.46□□□□□ -0.57
PABPC1-202ENST00000517403 SUSD4Q5VX71 490 aa11.46□□□□□ -0.57
PABPC1-202ENST00000517403 NBPF5PQ86XG9 351 aaPredicted RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms