RNA–Protein interactions for RNA: ENST00000516222.1

RNU6-561P-201, Transcript of RNA, U6 small nuclear 561, pseudogene, humanhuman

BASIC

Gene RNU6-561P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-561P-201ENST00000516222 LZTS3O60299 673 aaPredicted RBP4.08□□□□□ -1.76
RNU6-561P-201ENST00000516222 SOX11P35716 441 aa4.08□□□□□ -1.76
RNU6-561P-201ENST00000516222 ADH7P40394 386 aa4.08□□□□□ -1.76
RNU6-561P-201ENST00000516222 PSME1Q06323 249 aa4.08□□□□□ -1.76
RNU6-561P-201ENST00000516222 LCE3BQ5TA77 95 aa4.08□□□□□ -1.76
RNU6-561P-201ENST00000516222 TXNRD3Q86VQ6 643 aa4.08□□□□□ -1.76
RNU6-561P-201ENST00000516222 PLPP7Q8NBV4 271 aa4.08□□□□□ -1.76
RNU6-561P-201ENST00000516222 L3MBTL2Q969R5 705 aa4.08□□□□□ -1.76
RNU6-561P-201ENST00000516222 SNRKQ9NRH2 765 aa4.08□□□□□ -1.76
RNU6-561P-201ENST00000516222 USP21Q9UK80 565 aa4.08□□□□□ -1.76
RNU6-561P-201ENST00000516222 CHIC2Q9UKJ5 165 aa4.08□□□□□ -1.76
RNU6-561P-201ENST00000516222 NOD1Q9Y239 953 aa4.08□□□□□ -1.76
RNU6-561P-201ENST00000516222 PAX4O43316 350 aa4.07□□□□□ -1.76
RNU6-561P-201ENST00000516222 HYAL3O43820 417 aaPredicted RBP4.07□□□□□ -1.76
RNU6-561P-201ENST00000516222 SPEM2Q0P670 501 aa4.07□□□□□ -1.76
RNU6-561P-201ENST00000516222 EML3Q32P44 896 aa4.07□□□□□ -1.76
RNU6-561P-201ENST00000516222 TP53INP1Q96A56 240 aa4.07□□□□□ -1.76
RNU6-561P-201ENST00000516222 LENG1Q96BZ8 264 aaPredicted RBP4.07□□□□□ -1.76
RNU6-561P-201ENST00000516222 EFCC1Q9HA90 598 aa4.07□□□□□ -1.76
RNU6-561P-201ENST00000516222 GOLGA2P5Q9HBQ8 144 aa4.07□□□□□ -1.76
RNU6-561P-201ENST00000516222 STRN4Q9NRL3 753 aa4.07□□□□□ -1.76
RNU6-561P-201ENST00000516222 PARP3Q9Y6F1 533 aa4.07□□□□□ -1.76
RNU6-561P-201ENST00000516222 SERTM1A2A2V5 107 aa4.06□□□□□ -1.76
RNU6-561P-201ENST00000516222 NOS2P35228 1153 aa4.06□□□□□ -1.76
RNU6-561P-201ENST00000516222 TXKP42681 527 aa4.06□□□□□ -1.76
RNU6-561P-201ENST00000516222 ADGRE1Q14246 886 aa4.06□□□□□ -1.76
RNU6-561P-201ENST00000516222 TEAD4Q15561 434 aa4.06□□□□□ -1.76
RNU6-561P-201ENST00000516222 FOXD4L6Q3SYB3 417 aaPredicted RBP4.06□□□□□ -1.76
RNU6-561P-201ENST00000516222 FOXD4L3Q6VB84 417 aaPredicted RBP4.06□□□□□ -1.76
RNU6-561P-201ENST00000516222 RHPN1Q8TCX5 695 aa4.06□□□□□ -1.76
RNU6-561P-201ENST00000516222 CEP63Q96MT8 703 aa4.06□□□□□ -1.76
RNU6-561P-201ENST00000516222 SCHIP1Q9P0W5 487 aaPredicted RBP4.06□□□□□ -1.76
RNU6-561P-201ENST00000516222 IQSEC3Q9UPP2 1182 aaPredicted RBP4.06□□□□□ -1.76
RNU6-561P-201ENST00000516222 TBC1D2BQ9UPU7 963 aa4.06□□□□□ -1.76
RNU6-561P-201ENST00000516222 TMEM229AB2RXF0 380 aa4.05□□□□□ -1.76
RNU6-561P-201ENST00000516222 GPR37L1O60883 481 aa4.05□□□□□ -1.76
RNU6-561P-201ENST00000516222 ALBP02768 609 aa4.05□□□□□ -1.76
RNU6-561P-201ENST00000516222 NID1P14543 1247 aa4.05□□□□□ -1.76
RNU6-561P-201ENST00000516222 TXLNAP40222 546 aa4.05□□□□□ -1.76
RNU6-561P-201ENST00000516222 VAC14Q08AM6 782 aa4.05□□□□□ -1.76
RNU6-561P-201ENST00000516222 TBC1D8BQ0IIM8 1120 aa4.05□□□□□ -1.76
RNU6-561P-201ENST00000516222 SFSWAPQ12872 951 aaKnown RBP4.05□□□□□ -1.76
RNU6-561P-201ENST00000516222 MBTPS1Q14703 1052 aa4.05□□□□□ -1.76
RNU6-561P-201ENST00000516222 PCSK7Q16549 785 aa4.05□□□□□ -1.76
RNU6-561P-201ENST00000516222 HIF1AQ16665 826 aa4.05□□□□□ -1.76
RNU6-561P-201ENST00000516222 SLC51AQ86UW1 340 aa4.05□□□□□ -1.76
RNU6-561P-201ENST00000516222 WWC1Q8IX03 1113 aa4.05□□□□□ -1.76
RNU6-561P-201ENST00000516222 BCANQ96GW7 911 aa4.05□□□□□ -1.76
RNU6-561P-201ENST00000516222 UBE2OQ9C0C9 1292 aaKnown RBP4.05□□□□□ -1.76
RNU6-561P-201ENST00000516222 IGFLR1Q9H665 355 aa4.05□□□□□ -1.76
RNU6-561P-201ENST00000516222 BRD7Q9NPI1 651 aa4.05□□□□□ -1.76
RNU6-561P-201ENST00000516222 KCNH4Q9UQ05 1017 aa4.05□□□□□ -1.76
RNU6-561P-201ENST00000516222 A0A0A0MRY4 1105 aa4.04□□□□□ -1.76
RNU6-561P-201ENST00000516222 SFI1A8K8P3 1242 aa4.04□□□□□ -1.76
RNU6-561P-201ENST00000516222 EML1O00423 815 aa4.04□□□□□ -1.76
RNU6-561P-201ENST00000516222 C1orf53Q5VUE5 145 aa4.04□□□□□ -1.76
RNU6-561P-201ENST00000516222 PNMA5Q96PV4 448 aa4.04□□□□□ -1.76
RNU6-561P-201ENST00000516222 SLC30A3Q99726 388 aa4.04□□□□□ -1.76
RNU6-561P-201ENST00000516222 MDFIQ99750 246 aa4.04□□□□□ -1.76
RNU6-561P-201ENST00000516222 JPH1Q9HDC5 661 aaPredicted RBP4.04□□□□□ -1.76
RNU6-561P-201ENST00000516222 HCN2Q9UL51 889 aa4.04□□□□□ -1.76
RNU6-561P-201ENST00000516222 STARD13Q9Y3M8 1113 aa4.04□□□□□ -1.76
RNU6-561P-201ENST00000516222 RBM19Q9Y4C8 960 aaKnown RBP4.04□□□□□ -1.76
RNU6-561P-201ENST00000516222 COBLO75128 1261 aa4.03□□□□□ -1.76
RNU6-561P-201ENST00000516222 RGS9O75916 674 aaPredicted RBP4.03□□□□□ -1.76
RNU6-561P-201ENST00000516222 SELPP16109 830 aa4.03□□□□□ -1.76
RNU6-561P-201ENST00000516222 ABL2P42684 1182 aa4.03□□□□□ -1.76
RNU6-561P-201ENST00000516222 GTF2IP78347 998 aa4.03□□□□□ -1.76
RNU6-561P-201ENST00000516222 COL9A3Q14050 684 aaPredicted RBP4.03□□□□□ -1.76
RNU6-561P-201ENST00000516222 C20orf204Q6ZNR8 217 aa4.03□□□□□ -1.76
RNU6-561P-201ENST00000516222 C8orf86Q6ZUL3 223 aa4.03□□□□□ -1.76
RNU6-561P-201ENST00000516222 TRIM50Q86XT4 487 aa4.03□□□□□ -1.76
RNU6-561P-201ENST00000516222 ZNF295-AS1Q8N0V1 137 aa4.03□□□□□ -1.76
RNU6-561P-201ENST00000516222 BHMTQ93088 406 aa4.03□□□□□ -1.76
RNU6-561P-201ENST00000516222 RNF112Q9ULX5 631 aa4.03□□□□□ -1.76
RNU6-561P-201ENST00000516222 PCDHGA11Q9Y5H2 935 aa4.03□□□□□ -1.76
RNU6-561P-201ENST00000516222 SKIP12755 728 aa4.02□□□□□ -1.77
RNU6-561P-201ENST00000516222 YBX3P16989 372 aaKnown RBP eCLIP4.02□□□□□ -1.77
RNU6-561P-201ENST00000516222 KCNQ4P56696 695 aa4.02□□□□□ -1.77
RNU6-561P-201ENST00000516222 PSMA6P60900 246 aaKnown RBP4.02□□□□□ -1.77
RNU6-561P-201ENST00000516222 SLC9A9Q8IVB4 645 aa4.02□□□□□ -1.77
RNU6-561P-201ENST00000516222 DTWD1Q8N5C7 304 aa4.02□□□□□ -1.77
RNU6-561P-201ENST00000516222 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.02□□□□□ -1.77
RNU6-561P-201ENST00000516222 KRTAP4-12Q9BQ66 201 aa4.02□□□□□ -1.77
RNU6-561P-201ENST00000516222 PCMTD2Q9NV79 361 aa4.02□□□□□ -1.77
RNU6-561P-201ENST00000516222 ARID4AP29374 1257 aaPredicted RBP4.01□□□□□ -1.77
RNU6-561P-201ENST00000516222 ATP1A2P50993 1020 aa4.01□□□□□ -1.77
RNU6-561P-201ENST00000516222 IRF5Q13568 498 aa4.01□□□□□ -1.77
RNU6-561P-201ENST00000516222 RAB44Q7Z6P3 723 aaPredicted RBP4.01□□□□□ -1.77
RNU6-561P-201ENST00000516222 DMRTC2Q8IXT2 367 aaPredicted RBP4.01□□□□□ -1.77
RNU6-561P-201ENST00000516222 FMR1NBQ8N0W7 255 aaPredicted RBP4.01□□□□□ -1.77
RNU6-561P-201ENST00000516222 NFATC2IPQ8NCF5 419 aa4.01□□□□□ -1.77
RNU6-561P-201ENST00000516222 DCAF11Q8TEB1 546 aa4.01□□□□□ -1.77
RNU6-561P-201ENST00000516222 NUDT8Q8WV74 236 aa4.01□□□□□ -1.77
RNU6-561P-201ENST00000516222 ZNF358Q9NW07 568 aa4.01□□□□□ -1.77
RNU6-561P-201ENST00000516222 SLC6A14Q9UN76 642 aa4.01□□□□□ -1.77
RNU6-561P-201ENST00000516222 USP3Q9Y6I4 520 aa4.01□□□□□ -1.77
RNU6-561P-201ENST00000516222 PTCD1O75127 700 aaKnown RBP4□□□□□ -1.77
RNU6-561P-201ENST00000516222 EPB42P16452 691 aa4□□□□□ -1.77
RNU6-561P-201ENST00000516222 MCTP1Q6DN14 999 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms