RNA–Protein interactions for RNA: ENST00000515869.1

ERCC6-208, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 2 BASIC

Gene ERCC6, Length 3,439 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-208ENST00000515869 ATP6V1DQ9Y5K8 247 aa10.42□□□□□ -0.74
ERCC6-208ENST00000515869 CDK12Q9NYV4 1490 aaPredicted RBP10.42□□□□□ -0.74
ERCC6-208ENST00000515869 CPSF1Q10570 1443 aaKnown RBP10.42□□□□□ -0.74
ERCC6-208ENST00000515869 KIAA0232Q92628 1395 aa10.42□□□□□ -0.74
ERCC6-208ENST00000515869 ZNF335Q9H4Z2 1342 aaPredicted RBP10.42□□□□□ -0.74
ERCC6-208ENST00000515869 FERMT3Q86UX7 667 aa10.42□□□□□ -0.74
ERCC6-208ENST00000515869 PRDM11Q9NQV5 511 aa10.42□□□□□ -0.74
ERCC6-208ENST00000515869 LIMCH1Q9UPQ0 1083 aa10.42□□□□□ -0.74
ERCC6-208ENST00000515869 SNX14Q9Y5W7 946 aa10.42□□□□□ -0.74
ERCC6-208ENST00000515869 ANKRD26Q9UPS8 1709 aa10.42□□□□□ -0.74
ERCC6-208ENST00000515869 F13A1P00488 732 aa10.42□□□□□ -0.74
ERCC6-208ENST00000515869 OS9Q13438 667 aaPredicted RBP10.42□□□□□ -0.74
ERCC6-208ENST00000515869 ATP2B3Q16720 1220 aa10.42□□□□□ -0.74
ERCC6-208ENST00000515869 ALKQ9UM73 1620 aa10.42□□□□□ -0.74
ERCC6-208ENST00000515869 RIOK3O14730 519 aaKnown RBP10.41□□□□□ -0.74
ERCC6-208ENST00000515869 AATKQ6ZMQ8 1374 aa10.41□□□□□ -0.74
ERCC6-208ENST00000515869 ATP7BP35670 1465 aa10.41□□□□□ -0.74
ERCC6-208ENST00000515869 GJB2P29033 226 aa10.41□□□□□ -0.74
ERCC6-208ENST00000515869 RUFY3Q7L099 469 aa10.41□□□□□ -0.74
ERCC6-208ENST00000515869 TCHHQ07283 1943 aa10.41□□□□□ -0.74
ERCC6-208ENST00000515869 SALL3Q9BXA9 1300 aa10.41□□□□□ -0.74
ERCC6-208ENST00000515869 KIF20BQ96Q89 1820 aa10.41□□□□□ -0.74
ERCC6-208ENST00000515869 MYO5BQ9ULV0 1848 aa10.41□□□□□ -0.74
ERCC6-208ENST00000515869 PTCD1O75127 700 aaKnown RBP10.4□□□□□ -0.74
ERCC6-208ENST00000515869 LARGE1O95461 756 aa10.4□□□□□ -0.74
ERCC6-208ENST00000515869 GCP02774 474 aa10.4□□□□□ -0.74
ERCC6-208ENST00000515869 MYL6BP14649 208 aa10.4□□□□□ -0.74
ERCC6-208ENST00000515869 KCNJ4P48050 445 aa10.4□□□□□ -0.74
ERCC6-208ENST00000515869 CCDC30Q5VVM6 783 aa10.4□□□□□ -0.74
ERCC6-208ENST00000515869 DIAPH3Q9NSV4 1193 aa10.4□□□□□ -0.74
ERCC6-208ENST00000515869 TAOK2Q9UL54 1235 aa10.4□□□□□ -0.74
ERCC6-208ENST00000515869 RPAP1Q9BWH6 1393 aaPredicted RBP10.4□□□□□ -0.74
ERCC6-208ENST00000515869 GOLGA6L6A8MZA4 724 aa10.4□□□□□ -0.74
ERCC6-208ENST00000515869 AP5Z1O43299 807 aa10.4□□□□□ -0.74
ERCC6-208ENST00000515869 ZSCAN20P17040 1043 aaPredicted RBP10.4□□□□□ -0.74
ERCC6-208ENST00000515869 U2AF2P26368 475 aaKnown RBP eCLIP10.4□□□□□ -0.74
ERCC6-208ENST00000515869 C1orf141Q5JVX7 400 aa10.4□□□□□ -0.74
ERCC6-208ENST00000515869 NBPF6Q5VWK0 638 aa10.4□□□□□ -0.74
ERCC6-208ENST00000515869 FAM173BQ6P4H8 233 aa10.4□□□□□ -0.74
ERCC6-208ENST00000515869 TOM1L2Q6ZVM7 507 aa10.4□□□□□ -0.74
ERCC6-208ENST00000515869 PPP1R42Q7Z4L9 355 aa10.4□□□□□ -0.74
ERCC6-208ENST00000515869 NECAB1Q8N987 351 aa10.4□□□□□ -0.74
ERCC6-208ENST00000515869 NBPF4Q96M43 638 aa10.4□□□□□ -0.74
ERCC6-208ENST00000515869 LGR6Q9HBX8 967 aa10.4□□□□□ -0.74
ERCC6-208ENST00000515869 SRGAP3O43295 1099 aa10.4□□□□□ -0.75
ERCC6-208ENST00000515869 JAKMIP1Q96N16 626 aaKnown RBP10.4□□□□□ -0.75
ERCC6-208ENST00000515869 GOLGA6L4A6NEF3 574 aa10.39□□□□□ -0.75
ERCC6-208ENST00000515869 CCDC192P0DO97 292 aa10.39□□□□□ -0.75
ERCC6-208ENST00000515869 CKAP2LQ8IYA6 745 aa10.39□□□□□ -0.75
ERCC6-208ENST00000515869 RAPGEF4Q8WZA2 1011 aa10.39□□□□□ -0.75
ERCC6-208ENST00000515869 STAP2Q9UGK3 403 aa10.39□□□□□ -0.75
ERCC6-208ENST00000515869 DLG5Q8TDM6 1919 aa10.39□□□□□ -0.75
ERCC6-208ENST00000515869 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.39□□□□□ -0.75
ERCC6-208ENST00000515869 SGSM2O43147 1006 aa10.39□□□□□ -0.75
ERCC6-208ENST00000515869 KCNQ3O43525 872 aa10.39□□□□□ -0.75
ERCC6-208ENST00000515869 PTGS1P23219 599 aa10.39□□□□□ -0.75
ERCC6-208ENST00000515869 DMTNQ08495 405 aa10.39□□□□□ -0.75
ERCC6-208ENST00000515869 PRPF40BQ6NWY9 871 aaKnown RBP10.39□□□□□ -0.75
ERCC6-208ENST00000515869 CNTROBQ8N137 903 aa10.39□□□□□ -0.75
ERCC6-208ENST00000515869 KIAA1524Q8TCG1 905 aa10.39□□□□□ -0.75
ERCC6-208ENST00000515869 KCNF1Q9H3M0 494 aa10.39□□□□□ -0.75
ERCC6-208ENST00000515869 PTPRUQ92729 1446 aa10.39□□□□□ -0.75
ERCC6-208ENST00000515869 RHPN1Q8TCX5 695 aa10.39□□□□□ -0.75
ERCC6-208ENST00000515869 USP44Q9H0E7 712 aa10.39□□□□□ -0.75
ERCC6-208ENST00000515869 CPS1P31327 1500 aa10.39□□□□□ -0.75
ERCC6-208ENST00000515869 RAD50Q92878 1312 aa10.38□□□□□ -0.75
ERCC6-208ENST00000515869 LUZP1Q86V48 1076 aa10.38□□□□□ -0.75
ERCC6-208ENST00000515869 TMEM87AQ8NBN3 555 aa10.38□□□□□ -0.75
ERCC6-208ENST00000515869 C16orf45Q96MC5 204 aaPredicted RBP10.38□□□□□ -0.75
ERCC6-208ENST00000515869 PDRG1Q9NUG6 133 aa10.38□□□□□ -0.75
ERCC6-208ENST00000515869 SPTLC3Q9NUV7 552 aa10.38□□□□□ -0.75
ERCC6-208ENST00000515869 HOXC9P31274 260 aa10.38□□□□□ -0.75
ERCC6-208ENST00000515869 ANKRD24Q8TF21 1146 aa10.38□□□□□ -0.75
ERCC6-208ENST00000515869 SAMD1Q6SPF0 538 aaPredicted RBP10.38□□□□□ -0.75
ERCC6-208ENST00000515869 ZNF592Q92610 1267 aa10.38□□□□□ -0.75
ERCC6-208ENST00000515869 PHAXQ9H814 394 aaKnown RBP10.38□□□□□ -0.75
ERCC6-208ENST00000515869 SOS1Q07889 1333 aaPredicted RBP10.37□□□□□ -0.75
ERCC6-208ENST00000515869 GTF2F1P35269 517 aaKnown RBP eCLIP10.37□□□□□ -0.75
ERCC6-208ENST00000515869 LRMPQ12912 555 aa10.37□□□□□ -0.75
ERCC6-208ENST00000515869 ADCK5Q3MIX3 580 aa10.37□□□□□ -0.75
ERCC6-208ENST00000515869 LARP1BQ659C4 914 aaKnown RBP10.37□□□□□ -0.75
ERCC6-208ENST00000515869 CCDC186Q7Z3E2 898 aa10.37□□□□□ -0.75
ERCC6-208ENST00000515869 TCEANC2Q96MN5 208 aa10.37□□□□□ -0.75
ERCC6-208ENST00000515869 TTC14Q96N46 770 aa10.37□□□□□ -0.75
ERCC6-208ENST00000515869 TRIM5Q9C035 493 aa10.37□□□□□ -0.75
ERCC6-208ENST00000515869 TFIP11Q9UBB9 837 aaKnown RBP10.37□□□□□ -0.75
ERCC6-208ENST00000515869 MTMR6Q9Y217 621 aa10.37□□□□□ -0.75
ERCC6-208ENST00000515869 AXIN2Q9Y2T1 843 aa10.37□□□□□ -0.75
ERCC6-208ENST00000515869 SRCAPQ6ZRS2 3230 aa10.37□□□□□ -0.75
ERCC6-208ENST00000515869 SSH2Q76I76 1423 aa10.37□□□□□ -0.75
ERCC6-208ENST00000515869 BRD2P25440 801 aaKnown RBP10.37□□□□□ -0.75
ERCC6-208ENST00000515869 LSG1Q9H089 658 aaKnown RBP10.37□□□□□ -0.75
ERCC6-208ENST00000515869 HDGFL1Q5TGJ6 251 aa10.36□□□□□ -0.75
ERCC6-208ENST00000515869 CCDC85AQ96PX6 553 aaPredicted RBP10.36□□□□□ -0.75
ERCC6-208ENST00000515869 NUP62CLQ9H1M0 184 aa10.36□□□□□ -0.75
ERCC6-208ENST00000515869 GOLGB1Q14789 3259 aaKnown RBP10.36□□□□□ -0.75
ERCC6-208ENST00000515869 CRB1P82279 1406 aa10.36□□□□□ -0.75
ERCC6-208ENST00000515869 MAP3K11Q16584 847 aa10.36□□□□□ -0.75
ERCC6-208ENST00000515869 C19orf44Q9H6X5 657 aa10.36□□□□□ -0.75
ERCC6-208ENST00000515869 CYP46A1Q9Y6A2 500 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms