RNA–Protein interactions for RNA: ENST00000515835.2

PDE4D-225, Transcript of phosphodiesterase 4D, humanhuman

TSL 4 BASIC

Gene PDE4D, Length 590 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-225ENST00000515835 TRAIPQ9BWF2 469 aa10.65□□□□□ -0.7
PDE4D-225ENST00000515835 PHACTR1Q9C0D0 580 aa10.65□□□□□ -0.7
PDE4D-225ENST00000515835 CRISPLD1Q9H336 500 aa10.65□□□□□ -0.7
PDE4D-225ENST00000515835 GPAMQ9HCL2 828 aa10.65□□□□□ -0.7
PDE4D-225ENST00000515835 H7C1W4 665 aa10.64□□□□□ -0.71
PDE4D-225ENST00000515835 LBRQ14739 615 aaKnown RBP10.64□□□□□ -0.71
PDE4D-225ENST00000515835 PHLDB3Q6NSJ2 640 aa10.64□□□□□ -0.71
PDE4D-225ENST00000515835 RIPOR1Q6ZS17 1223 aa10.64□□□□□ -0.71
PDE4D-225ENST00000515835 TRIM22Q8IYM9 498 aa10.64□□□□□ -0.71
PDE4D-225ENST00000515835 PGBD3Q8N328 593 aa10.64□□□□□ -0.71
PDE4D-225ENST00000515835 POLA1P09884 1462 aaPredicted RBP10.63□□□□□ -0.71
PDE4D-225ENST00000515835 RTN1Q16799 776 aa10.63□□□□□ -0.71
PDE4D-225ENST00000515835 C7orf43Q8WVR3 580 aa10.63□□□□□ -0.71
PDE4D-225ENST00000515835 H3BM21 787 aa10.62□□□□□ -0.71
PDE4D-225ENST00000515835 ARSJQ5FYB0 599 aaPredicted RBP10.62□□□□□ -0.71
PDE4D-225ENST00000515835 BICDL1Q6ZP65 573 aa10.62□□□□□ -0.71
PDE4D-225ENST00000515835 RHPN1Q8TCX5 695 aa10.62□□□□□ -0.71
PDE4D-225ENST00000515835 MYO19Q96H55 970 aa10.62□□□□□ -0.71
PDE4D-225ENST00000515835 NGLY1Q96IV0 654 aa10.62□□□□□ -0.71
PDE4D-225ENST00000515835 ZIC5Q96T25 663 aa10.62□□□□□ -0.71
PDE4D-225ENST00000515835 RUBCNLQ9H714 662 aa10.62□□□□□ -0.71
PDE4D-225ENST00000515835 TARBP1Q13395 1621 aaKnown RBP10.62□□□□□ -0.71
PDE4D-225ENST00000515835 TERTO14746 1132 aaKnown RBP10.61□□□□□ -0.71
PDE4D-225ENST00000515835 BRD1O95696 1058 aa10.61□□□□□ -0.71
PDE4D-225ENST00000515835 PDIA4P13667 645 aaKnown RBP10.61□□□□□ -0.71
PDE4D-225ENST00000515835 EFHC2Q5JST6 749 aa10.61□□□□□ -0.71
PDE4D-225ENST00000515835 HOMEZQ8IX15 550 aa10.61□□□□□ -0.71
PDE4D-225ENST00000515835 NANOS1Q8WY41 292 aaKnown RBP10.61□□□□□ -0.71
PDE4D-225ENST00000515835 MKNK1Q9BUB5 465 aa10.61□□□□□ -0.71
PDE4D-225ENST00000515835 QTRT2Q9H974 415 aaKnown RBP10.61□□□□□ -0.71
PDE4D-225ENST00000515835 CUEDC1Q9NWM3 386 aaPredicted RBP10.61□□□□□ -0.71
PDE4D-225ENST00000515835 SOGA1O94964 1423 aa10.6□□□□□ -0.71
PDE4D-225ENST00000515835 A0A1W2PNR3 127 aa10.6□□□□□ -0.71
PDE4D-225ENST00000515835 DBN1Q16643 649 aa10.6□□□□□ -0.71
PDE4D-225ENST00000515835 HIF1AQ16665 826 aa10.6□□□□□ -0.71
PDE4D-225ENST00000515835 NLRP8Q86W28 1048 aa10.6□□□□□ -0.71
PDE4D-225ENST00000515835 NUCKS1Q9H1E3 243 aaKnown RBP10.6□□□□□ -0.71
PDE4D-225ENST00000515835 MTMR7Q9Y216 660 aa10.6□□□□□ -0.71
PDE4D-225ENST00000515835 EIF4G3O43432 1585 aaKnown RBP10.6□□□□□ -0.71
PDE4D-225ENST00000515835 SLC16A10Q8TF71 515 aa10.59□□□□□ -0.71
PDE4D-225ENST00000515835 ZNF837Q96EG3 531 aaPredicted RBP10.59□□□□□ -0.71
PDE4D-225ENST00000515835 AQRO60306 1485 aaKnown RBP eCLIP10.59□□□□□ -0.71
PDE4D-225ENST00000515835 WDR97A6NE52 1622 aa10.58□□□□□ -0.72
PDE4D-225ENST00000515835 VEGFBP49765 207 aa10.58□□□□□ -0.72
PDE4D-225ENST00000515835 C16orf46Q6P387 395 aa10.58□□□□□ -0.72
PDE4D-225ENST00000515835 CAPN12Q6ZSI9 719 aa10.58□□□□□ -0.72
PDE4D-225ENST00000515835 NEUROD4Q9HD90 331 aa10.58□□□□□ -0.72
PDE4D-225ENST00000515835 ANKIB1Q9P2G1 1089 aa10.58□□□□□ -0.72
PDE4D-225ENST00000515835 ARID4AP29374 1257 aaPredicted RBP10.57□□□□□ -0.72
PDE4D-225ENST00000515835 FIGNL1Q6PIW4 674 aa10.57□□□□□ -0.72
PDE4D-225ENST00000515835 SV2AQ7L0J3 742 aa10.57□□□□□ -0.72
PDE4D-225ENST00000515835 VWA5B2Q8N398 1253 aa10.57□□□□□ -0.72
PDE4D-225ENST00000515835 GJA3Q9Y6H8 435 aa10.57□□□□□ -0.72
PDE4D-225ENST00000515835 CDC14CA4D256 554 aa10.56□□□□□ -0.72
PDE4D-225ENST00000515835 THBS1P07996 1170 aa10.56□□□□□ -0.72
PDE4D-225ENST00000515835 VSIG8P0DPA2 414 aa10.56□□□□□ -0.72
PDE4D-225ENST00000515835 C11orf91Q3C1V1 193 aa10.56□□□□□ -0.72
PDE4D-225ENST00000515835 COX20Q5RI15 118 aa10.56□□□□□ -0.72
PDE4D-225ENST00000515835 SEPT3Q9UH03 358 aa10.56□□□□□ -0.72
PDE4D-225ENST00000515835 FGD5Q6ZNL6 1462 aa10.55□□□□□ -0.72
PDE4D-225ENST00000515835 RAD54L2Q9Y4B4 1467 aa10.55□□□□□ -0.72
PDE4D-225ENST00000515835 CUX1P39880 1505 aa10.55□□□□□ -0.72
PDE4D-225ENST00000515835 SCNN1AP37088 669 aa10.55□□□□□ -0.72
PDE4D-225ENST00000515835 UBAP2LQ14157 1087 aaKnown RBP10.55□□□□□ -0.72
PDE4D-225ENST00000515835 NAA30Q147X3 362 aaPredicted RBP10.55□□□□□ -0.72
PDE4D-225ENST00000515835 SAMD5Q5TGI4 173 aa10.55□□□□□ -0.72
PDE4D-225ENST00000515835 FOXR1Q6PIV2 292 aa10.55□□□□□ -0.72
PDE4D-225ENST00000515835 SUSD3Q96L08 255 aa10.55□□□□□ -0.72
PDE4D-225ENST00000515835 TDRD9Q8NDG6 1382 aaKnown RBP10.54□□□□□ -0.72
PDE4D-225ENST00000515835 DGKZQ13574 1117 aa10.54□□□□□ -0.72
PDE4D-225ENST00000515835 LRRC69Q6ZNQ3 347 aa10.54□□□□□ -0.72
PDE4D-225ENST00000515835 ZNF775Q96BV0 537 aaPredicted RBP10.54□□□□□ -0.72
PDE4D-225ENST00000515835 ZCCHC2Q9C0B9 1178 aaKnown RBP10.54□□□□□ -0.72
PDE4D-225ENST00000515835 SAP130Q9H0E3 1048 aa10.54□□□□□ -0.72
PDE4D-225ENST00000515835 LRFN2Q9ULH4 789 aa10.54□□□□□ -0.72
PDE4D-225ENST00000515835 NFX1Q12986 1120 aaKnown RBP10.53□□□□□ -0.72
PDE4D-225ENST00000515835 IER5Q5VY09 327 aa10.53□□□□□ -0.72
PDE4D-225ENST00000515835 TXNDC2Q86VQ3 553 aa10.53□□□□□ -0.72
PDE4D-225ENST00000515835 IRF7Q92985 503 aa10.53□□□□□ -0.72
PDE4D-225ENST00000515835 GTPBP3Q969Y2 492 aaKnown RBP10.53□□□□□ -0.72
PDE4D-225ENST00000515835 KLRG1Q96E93 195 aa10.53□□□□□ -0.72
PDE4D-225ENST00000515835 KLK14Q9P0G3 267 aa10.53□□□□□ -0.72
PDE4D-225ENST00000515835 PCDHGC4Q9Y5F7 938 aa10.53□□□□□ -0.72
PDE4D-225ENST00000515835 TGFBR3LH3BV60 316 aa10.52□□□□□ -0.73
PDE4D-225ENST00000515835 KCNA1Q09470 495 aa10.52□□□□□ -0.73
PDE4D-225ENST00000515835 ZNF280CQ8ND82 737 aa10.52□□□□□ -0.73
PDE4D-225ENST00000515835 HELQQ8TDG4 1101 aa10.52□□□□□ -0.73
PDE4D-225ENST00000515835 GTF3C2Q8WUA4 911 aaPredicted RBP10.52□□□□□ -0.73
PDE4D-225ENST00000515835 HSH2DQ96JZ2 352 aa10.52□□□□□ -0.73
PDE4D-225ENST00000515835 TRERF1Q96PN7 1200 aa10.52□□□□□ -0.73
PDE4D-225ENST00000515835 ARHGEF11O15085 1522 aa10.52□□□□□ -0.73
PDE4D-225ENST00000515835 GRIN2BQ13224 1484 aa10.51□□□□□ -0.73
PDE4D-225ENST00000515835 MAGI1Q96QZ7 1491 aaPredicted RBP10.51□□□□□ -0.73
PDE4D-225ENST00000515835 PATL2C9JE40 543 aaKnown RBP10.51□□□□□ -0.73
PDE4D-225ENST00000515835 ATXN7O15265 892 aaPredicted RBP10.51□□□□□ -0.73
PDE4D-225ENST00000515835 BRD2P25440 801 aaKnown RBP10.51□□□□□ -0.73
PDE4D-225ENST00000515835 CCER1Q8TC90 406 aaPredicted RBP10.51□□□□□ -0.73
PDE4D-225ENST00000515835 CFHR5Q9BXR6 569 aa10.51□□□□□ -0.73
PDE4D-225ENST00000515835 PHF24Q9UPV7 400 aa10.51□□□□□ -0.73
PDE4D-225ENST00000515835 GNEQ9Y223 722 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms