RNA–Protein interactions for RNA: ENST00000515824.1

LMNA-225, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-225ENST00000515824 NPHP1O15259 732 aa25.15■■□□□ 1.62
LMNA-225ENST00000515824 HDGFL1Q5TGJ6 251 aa25.15■■□□□ 1.62
LMNA-225ENST00000515824 TTLL7Q6ZT98 887 aa25.15■■□□□ 1.62
LMNA-225ENST00000515824 SALL2Q9Y467 1007 aaPredicted RBP25.15■■□□□ 1.62
LMNA-225ENST00000515824 YY1P25490 414 aa25.14■■□□□ 1.62
LMNA-225ENST00000515824 HLFQ16534 295 aa25.14■■□□□ 1.62
LMNA-225ENST00000515824 NIP7Q9Y221 180 aaKnown RBP eCLIP25.14■■□□□ 1.62
LMNA-225ENST00000515824 DDX21Q9NR30 783 aaKnown RBP eCLIP25.13■■□□□ 1.61
LMNA-225ENST00000515824 PIM2Q9P1W9 311 aa25.13■■□□□ 1.61
LMNA-225ENST00000515824 IL16Q14005 1332 aa25.12■■□□□ 1.61
LMNA-225ENST00000515824 ANXA1P04083 346 aa25.12■■□□□ 1.61
LMNA-225ENST00000515824 KCNA3P22001 575 aa25.12■■□□□ 1.61
LMNA-225ENST00000515824 PROSER3Q2NL68 480 aa25.12■■□□□ 1.61
LMNA-225ENST00000515824 PRR5LQ6MZQ0 368 aa25.12■■□□□ 1.61
LMNA-225ENST00000515824 LRP10Q7Z4F1 713 aa25.12■■□□□ 1.61
LMNA-225ENST00000515824 CNBD1Q8NA66 436 aa25.12■■□□□ 1.61
LMNA-225ENST00000515824 BCS1LQ9Y276 419 aa25.12■■□□□ 1.61
LMNA-225ENST00000515824 CCER2I3L3R5 266 aa25.11■■□□□ 1.61
LMNA-225ENST00000515824 CHRNA5P30532 468 aa25.11■■□□□ 1.61
LMNA-225ENST00000515824 NBPF5PQ86XG9 351 aaPredicted RBP25.11■■□□□ 1.61
LMNA-225ENST00000515824 CHMP4AQ9BY43 222 aa25.11■■□□□ 1.61
LMNA-225ENST00000515824 ZBTB3Q9H5J0 574 aa25.11■■□□□ 1.61
LMNA-225ENST00000515824 DBF4Q9UBU7 674 aaPredicted RBP25.11■■□□□ 1.61
LMNA-225ENST00000515824 BCORQ6W2J9 1755 aa25.1■■□□□ 1.61
LMNA-225ENST00000515824 ELL2O00472 640 aaPredicted RBP25.1■■□□□ 1.61
LMNA-225ENST00000515824 ST5P78524 1137 aa25.1■■□□□ 1.61
LMNA-225ENST00000515824 TPTE2Q6XPS3 522 aa25.1■■□□□ 1.61
LMNA-225ENST00000515824 COPS6Q7L5N1 327 aa25.1■■□□□ 1.61
LMNA-225ENST00000515824 WDR63Q8IWG1 891 aa25.1■■□□□ 1.61
LMNA-225ENST00000515824 BRIP1Q9BX63 1249 aa25.1■■□□□ 1.61
LMNA-225ENST00000515824 CHPF2Q9P2E5 772 aa25.1■■□□□ 1.61
LMNA-225ENST00000515824 NRXN2Q9P2S2 1712 aa25.09■■□□□ 1.61
LMNA-225ENST00000515824 H0YIN7 160 aa25.09■■□□□ 1.61
LMNA-225ENST00000515824 PDE6BP35913 854 aa25.09■■□□□ 1.61
LMNA-225ENST00000515824 AIMP1Q12904 312 aaKnown RBP25.09■■□□□ 1.61
LMNA-225ENST00000515824 PDZRN3Q9UPQ7 1066 aa25.09■■□□□ 1.61
LMNA-225ENST00000515824 AFDNP55196 1824 aaKnown RBP25.09■■□□□ 1.61
LMNA-225ENST00000515824 DALRD3Q5D0E6 543 aaKnown RBP25.08■■□□□ 1.61
LMNA-225ENST00000515824 CCDC24Q8N4L8 307 aa25.08■■□□□ 1.61
LMNA-225ENST00000515824 C8orf58Q8NAV2 365 aa25.08■■□□□ 1.61
LMNA-225ENST00000515824 XAGE3Q8WTP9 111 aa25.08■■□□□ 1.61
LMNA-225ENST00000515824 N4BP2Q86UW6 1770 aaPredicted RBP25.08■■□□□ 1.6
LMNA-225ENST00000515824 GIGYF2Q6Y7W6 1299 aaKnown RBP25.07■■□□□ 1.6
LMNA-225ENST00000515824 C2CD5Q86YS7 1000 aa25.07■■□□□ 1.6
LMNA-225ENST00000515824 TSR2Q969E8 191 aaKnown RBP25.07■■□□□ 1.6
LMNA-225ENST00000515824 FAM177BA6PVY3 158 aa25.06■■□□□ 1.6
LMNA-225ENST00000515824 DIEXFQ68CQ4 756 aaKnown RBP25.06■■□□□ 1.6
LMNA-225ENST00000515824 HYPKQ9NX55 129 aa25.06■■□□□ 1.6
LMNA-225ENST00000515824 KIAA1551Q9HCM1 1747 aa25.06■■□□□ 1.6
LMNA-225ENST00000515824 GTF2E1P29083 439 aaPredicted RBP25.05■■□□□ 1.6
LMNA-225ENST00000515824 NYXQ9GZU5 481 aa25.05■■□□□ 1.6
LMNA-225ENST00000515824 HSP90AB3PQ58FF7 597 aa25.04■■□□□ 1.6
LMNA-225ENST00000515824 ATP10DQ9P241 1426 aa25.03■■□□□ 1.6
LMNA-225ENST00000515824 GPTP24298 496 aa25.03■■□□□ 1.6
LMNA-225ENST00000515824 CCDC30Q5VVM6 783 aa25.03■■□□□ 1.6
LMNA-225ENST00000515824 ZNF34Q8IZ26 560 aa25.03■■□□□ 1.6
LMNA-225ENST00000515824 TSPYL6Q8N831 410 aa25.02■■□□□ 1.6
LMNA-225ENST00000515824 TTLL6Q8N841 843 aa25.02■■□□□ 1.6
LMNA-225ENST00000515824 PARP10Q53GL7 1025 aa25.01■■□□□ 1.59
LMNA-225ENST00000515824 ANKRD13DQ6ZTN6 518 aa25.01■■□□□ 1.59
LMNA-225ENST00000515824 ZNF622Q969S3 477 aaKnown RBP eCLIP25.01■■□□□ 1.592e-8■■□□□ 12.5
LMNA-225ENST00000515824 GOLGA2Q08379 1002 aa25■■□□□ 1.59
LMNA-225ENST00000515824 TWISTNBQ3B726 338 aaPredicted RBP25■■□□□ 1.59
LMNA-225ENST00000515824 ARHGAP27Q6ZUM4 889 aa25■■□□□ 1.59
LMNA-225ENST00000515824 PLBD2Q8NHP8 589 aa25■■□□□ 1.59
LMNA-225ENST00000515824 CHD4Q14839 1912 aa25■■□□□ 1.59
LMNA-225ENST00000515824 SUSD4Q5VX71 490 aa24.99■■□□□ 1.59
LMNA-225ENST00000515824 UBN2Q6ZU65 1347 aa24.99■■□□□ 1.59
LMNA-225ENST00000515824 PPP1R42Q7Z4L9 355 aa24.99■■□□□ 1.59
LMNA-225ENST00000515824 MYH16Q9H6N6 1097 aa24.99■■□□□ 1.59
LMNA-225ENST00000515824 FANCIQ9NVI1 1328 aa24.99■■□□□ 1.59
LMNA-225ENST00000515824 NUP98P52948 1817 aa24.98■■□□□ 1.59
LMNA-225ENST00000515824 TCIRG1Q13488 830 aa24.98■■□□□ 1.59
LMNA-225ENST00000515824 IBTKQ9P2D0 1353 aaPredicted RBP24.97■■□□□ 1.59
LMNA-225ENST00000515824 SRGNP10124 158 aa24.97■■□□□ 1.59
LMNA-225ENST00000515824 NUTM1Q86Y26 1132 aa24.97■■□□□ 1.59
LMNA-225ENST00000515824 MASTLQ96GX5 879 aa24.97■■□□□ 1.59
LMNA-225ENST00000515824 STYK1Q6J9G0 422 aa24.96■■□□□ 1.59
LMNA-225ENST00000515824 CNKSR1Q969H4 720 aa24.96■■□□□ 1.59
LMNA-225ENST00000515824 UTP14AQ9BVJ6 771 aaKnown RBP24.96■■□□□ 1.59
LMNA-225ENST00000515824 STK31Q9BXU1 1019 aa24.96■■□□□ 1.59
LMNA-225ENST00000515824 BRCA1P38398 1863 aaKnown RBP24.96■■□□□ 1.59
LMNA-225ENST00000515824 KLRG2A4D1S0 409 aaPredicted RBP24.95■■□□□ 1.58
LMNA-225ENST00000515824 ERFEQ4G0M1 354 aa24.95■■□□□ 1.58
LMNA-225ENST00000515824 PHAXQ9H814 394 aaKnown RBP24.95■■□□□ 1.58
LMNA-225ENST00000515824 RIC3Q7Z5B4 369 aa24.94■■□□□ 1.58
LMNA-225ENST00000515824 SPINK5Q9NQ38 1064 aaPredicted RBP24.94■■□□□ 1.58
LMNA-225ENST00000515824 ANKRD31Q8N7Z5 1873 aa24.94■■□□□ 1.58
LMNA-225ENST00000515824 ZNF521Q96K83 1311 aa24.93■■□□□ 1.58
LMNA-225ENST00000515824 NTSR2O95665 410 aa24.93■■□□□ 1.58
LMNA-225ENST00000515824 NPR1P16066 1061 aa24.93■■□□□ 1.58
LMNA-225ENST00000515824 EXOSC9Q06265 439 aaKnown RBP24.93■■□□□ 1.58
LMNA-225ENST00000515824 NLRP10Q86W26 655 aa24.93■■□□□ 1.58
LMNA-225ENST00000515824 MIER1Q8N108 512 aa24.93■■□□□ 1.58
LMNA-225ENST00000515824 DDX58O95786 925 aaKnown RBP24.92■■□□□ 1.58
LMNA-225ENST00000515824 TCERG1O14776 1098 aaKnown RBP24.91■■□□□ 1.58
LMNA-225ENST00000515824 VAMP4O75379 141 aa24.91■■□□□ 1.58
LMNA-225ENST00000515824 ZNF784Q8NCA9 323 aaPredicted RBP24.91■■□□□ 1.58
LMNA-225ENST00000515824 RNF123Q5XPI4 1314 aa24.9■■□□□ 1.58
LMNA-225ENST00000515824 SLC4A2P04920 1241 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms