RNA–Protein interactions for RNA: ENST00000515658.1

COL4A5-210, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-210ENST00000515658 PRKRIP1Q9H875 184 aaPredicted RBP13.14□□□□□ -0.31
COL4A5-210ENST00000515658 KDM3BQ7LBC6 1761 aa13.13□□□□□ -0.31
COL4A5-210ENST00000515658 CARMIL3Q8ND23 1372 aa13.13□□□□□ -0.31
COL4A5-210ENST00000515658 POLRMTO00411 1230 aaKnown RBP13.13□□□□□ -0.31
COL4A5-210ENST00000515658 GALR2O43603 387 aaPredicted RBP13.13□□□□□ -0.31
COL4A5-210ENST00000515658 TM4SF1P30408 202 aa13.13□□□□□ -0.31
COL4A5-210ENST00000515658 EIF5P55010 431 aaKnown RBP13.13□□□□□ -0.31
COL4A5-210ENST00000515658 NFIXQ14938 502 aa13.13□□□□□ -0.31
COL4A5-210ENST00000515658 IFNL1Q8IU54 200 aa13.13□□□□□ -0.31
COL4A5-210ENST00000515658 NLGN1Q8N2Q7 840 aa13.13□□□□□ -0.31
COL4A5-210ENST00000515658 ZNF330Q9Y3S2 320 aaPredicted RBP13.13□□□□□ -0.31
COL4A5-210ENST00000515658 NBPF26B4DH59 902 aa13.12□□□□□ -0.31
COL4A5-210ENST00000515658 DPEP1P16444 411 aa13.12□□□□□ -0.31
COL4A5-210ENST00000515658 KCNA3P22001 575 aa13.12□□□□□ -0.31
COL4A5-210ENST00000515658 NBPF10Q6P3W6 841 aaKnown RBP13.12□□□□□ -0.31
COL4A5-210ENST00000515658 CCDC24Q8N4L8 307 aa13.12□□□□□ -0.31
COL4A5-210ENST00000515658 NBPF15Q8N660 670 aa13.12□□□□□ -0.31
COL4A5-210ENST00000515658 RTF1Q92541 710 aaKnown RBP13.12□□□□□ -0.31
COL4A5-210ENST00000515658 FMNL2Q96PY5 1086 aa13.12□□□□□ -0.31
COL4A5-210ENST00000515658 NARFQ9UHQ1 456 aa13.12□□□□□ -0.31
COL4A5-210ENST00000515658 TBC1D2BQ9UPU7 963 aa13.12□□□□□ -0.31
COL4A5-210ENST00000515658 SCN7AQ01118 1682 aa13.12□□□□□ -0.31
COL4A5-210ENST00000515658 AFDNP55196 1824 aaKnown RBP13.11□□□□□ -0.31
COL4A5-210ENST00000515658 CHRNA5P30532 468 aa13.11□□□□□ -0.31
COL4A5-210ENST00000515658 BICDL1Q6ZP65 573 aa13.11□□□□□ -0.31
COL4A5-210ENST00000515658 TAOK2Q9UL54 1235 aa13.11□□□□□ -0.31
COL4A5-210ENST00000515658 ADAMTS8Q9UP79 889 aa13.11□□□□□ -0.31
COL4A5-210ENST00000515658 RIOK3O14730 519 aaKnown RBP13.1□□□□□ -0.31
COL4A5-210ENST00000515658 TAF7Q15545 349 aaPredicted RBP13.1□□□□□ -0.31
COL4A5-210ENST00000515658 TBC1D9BQ66K14 1250 aa13.1□□□□□ -0.31
COL4A5-210ENST00000515658 ZNF784Q8NCA9 323 aaPredicted RBP13.1□□□□□ -0.31
COL4A5-210ENST00000515658 PARP3Q9Y6F1 533 aa13.1□□□□□ -0.31
COL4A5-210ENST00000515658 NRXN2Q9P2S2 1712 aa13.1□□□□□ -0.31
COL4A5-210ENST00000515658 HTATSF1O43719 755 aaKnown RBP13.09□□□□□ -0.31
COL4A5-210ENST00000515658 STARD3NLO95772 234 aa13.09□□□□□ -0.31
COL4A5-210ENST00000515658 HMGB2P26583 209 aaKnown RBP13.09□□□□□ -0.31
COL4A5-210ENST00000515658 BRCA1P38398 1863 aaKnown RBP13.09□□□□□ -0.31
COL4A5-210ENST00000515658 TMPOP42166 694 aaKnown RBP13.09□□□□□ -0.31
COL4A5-210ENST00000515658 NEUROD2Q15784 382 aa13.09□□□□□ -0.31
COL4A5-210ENST00000515658 RNF25Q96BH1 459 aaPredicted RBP13.09□□□□□ -0.31
COL4A5-210ENST00000515658 PCDHB8Q9UN66 801 aa13.09□□□□□ -0.31
COL4A5-210ENST00000515658 CHD4Q14839 1912 aa13.09□□□□□ -0.31
COL4A5-210ENST00000515658 BCORQ6W2J9 1755 aa13.09□□□□□ -0.31
COL4A5-210ENST00000515658 ZPR1O75312 459 aa13.08□□□□□ -0.32
COL4A5-210ENST00000515658 CAMTA2O94983 1202 aa13.08□□□□□ -0.32
COL4A5-210ENST00000515658 RIPK4P57078 832 aa13.08□□□□□ -0.32
COL4A5-210ENST00000515658 KRT24Q2M2I5 525 aa13.08□□□□□ -0.32
COL4A5-210ENST00000515658 TRIM35Q9UPQ4 493 aa13.08□□□□□ -0.32
COL4A5-210ENST00000515658 MAPK8IP3Q9UPT6 1336 aa13.08□□□□□ -0.32
COL4A5-210ENST00000515658 LAMB4A4D0S4 1761 aa13.07□□□□□ -0.32
COL4A5-210ENST00000515658 RGL2O15211 777 aa13.07□□□□□ -0.32
COL4A5-210ENST00000515658 EIF4A1P60842 406 aaKnown RBP13.07□□□□□ -0.32
COL4A5-210ENST00000515658 ANKRD31Q8N7Z5 1873 aa13.07□□□□□ -0.32
COL4A5-210ENST00000515658 SERPINB2P05120 415 aa13.06□□□□□ -0.32
COL4A5-210ENST00000515658 SNRPA1P09661 255 aaKnown RBP13.06□□□□□ -0.32
COL4A5-210ENST00000515658 IL6STP40189 918 aaPredicted RBP13.06□□□□□ -0.32
COL4A5-210ENST00000515658 BCS1LQ9Y276 419 aa13.06□□□□□ -0.32
COL4A5-210ENST00000515658 COL11A2P13942 1736 aaPredicted RBP13.05□□□□□ -0.32
COL4A5-210ENST00000515658 ZNF316A6NFI3 1004 aaPredicted RBP13.05□□□□□ -0.32
COL4A5-210ENST00000515658 GIGYF1O75420 1035 aaPredicted RBP13.05□□□□□ -0.32
COL4A5-210ENST00000515658 TIE1P35590 1138 aa13.05□□□□□ -0.32
COL4A5-210ENST00000515658 HLFQ16534 295 aa13.05□□□□□ -0.32
COL4A5-210ENST00000515658 DZIP3Q86Y13 1208 aaKnown RBP13.05□□□□□ -0.32
COL4A5-210ENST00000515658 NGEFQ8N5V2 710 aa13.05□□□□□ -0.32
COL4A5-210ENST00000515658 ANXA1P04083 346 aa13.04□□□□□ -0.32
COL4A5-210ENST00000515658 ZEB1P37275 1124 aaPredicted RBP13.04□□□□□ -0.32
COL4A5-210ENST00000515658 TGFB2P61812 414 aa13.04□□□□□ -0.32
COL4A5-210ENST00000515658 PDAP1Q13442 181 aaKnown RBP13.04□□□□□ -0.32
COL4A5-210ENST00000515658 PROSER3Q2NL68 480 aa13.04□□□□□ -0.32
COL4A5-210ENST00000515658 RUNDC1Q96C34 613 aa13.04□□□□□ -0.32
COL4A5-210ENST00000515658 TEX13AQ9BXU3 409 aaPredicted RBP13.04□□□□□ -0.32
COL4A5-210ENST00000515658 WDR43Q15061 677 aaKnown RBP eCLIP13.03□□□□□ -0.32
COL4A5-210ENST00000515658 TTLL7Q6ZT98 887 aa13.03□□□□□ -0.32
COL4A5-210ENST00000515658 NECTIN2Q92692 538 aa13.03□□□□□ -0.32
COL4A5-210ENST00000515658 TSPYL4Q9UJ04 414 aa13.03□□□□□ -0.32
COL4A5-210ENST00000515658 ADCY9O60503 1353 aa13.03□□□□□ -0.32
COL4A5-210ENST00000515658 GRIN3BO60391 1043 aa13.02□□□□□ -0.33
COL4A5-210ENST00000515658 NEFMP07197 916 aa13.02□□□□□ -0.33
COL4A5-210ENST00000515658 MYL6BP14649 208 aa13.02□□□□□ -0.33
COL4A5-210ENST00000515658 PRELPP51888 382 aa13.02□□□□□ -0.33
COL4A5-210ENST00000515658 PRR5LQ6MZQ0 368 aa13.02□□□□□ -0.33
COL4A5-210ENST00000515658 LRP10Q7Z4F1 713 aa13.02□□□□□ -0.33
COL4A5-210ENST00000515658 SLC51AQ86UW1 340 aa13.02□□□□□ -0.33
COL4A5-210ENST00000515658 ATP10DQ9P241 1426 aa13.02□□□□□ -0.33
COL4A5-210ENST00000515658 A0A087WZG4 1122 aa13.01□□□□□ -0.33
COL4A5-210ENST00000515658 APAF1O14727 1248 aa13.01□□□□□ -0.33
COL4A5-210ENST00000515658 PDIA6Q15084 440 aa13.01□□□□□ -0.33
COL4A5-210ENST00000515658 ZNF526Q8TF50 670 aaPredicted RBP13.01□□□□□ -0.33
COL4A5-210ENST00000515658 LAS1LQ9Y4W2 734 aaKnown RBP13.01□□□□□ -0.33
COL4A5-210ENST00000515658 DLEC1Q9Y238 1755 aa13.01□□□□□ -0.33
COL4A5-210ENST00000515658 TNRC6CQ9HCJ0 1690 aaKnown RBP13□□□□□ -0.33
COL4A5-210ENST00000515658 FAM177BA6PVY3 158 aa13□□□□□ -0.33
COL4A5-210ENST00000515658 PSEN1P49768 467 aa13□□□□□ -0.33
COL4A5-210ENST00000515658 ZNF428Q96B54 188 aa13□□□□□ -0.33
COL4A5-210ENST00000515658 TRPC6Q9Y210 931 aa13□□□□□ -0.33
COL4A5-210ENST00000515658 CHL1O00533 1208 aa12.99□□□□□ -0.33
COL4A5-210ENST00000515658 EIF2S2P20042 333 aaKnown RBP12.99□□□□□ -0.33
COL4A5-210ENST00000515658 RASSF7Q02833 373 aa12.99□□□□□ -0.33
COL4A5-210ENST00000515658 ARHGAP27Q6ZUM4 889 aa12.99□□□□□ -0.33
COL4A5-210ENST00000515658 C2CD5Q86YS7 1000 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms