RNA–Protein interactions for RNA: ENST00000515143.5

SPOCK3-223, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 4

Gene SPOCK3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-223ENST00000515143 LTBP3Q9NS15 1303 aa9.56□□□□□ -0.88
SPOCK3-223ENST00000515143 C9orf131Q5VYM1 1079 aa9.56□□□□□ -0.88
SPOCK3-223ENST00000515143 NPM2Q86SE8 214 aaKnown RBP9.56□□□□□ -0.88
SPOCK3-223ENST00000515143 C2CD5Q86YS7 1000 aa9.56□□□□□ -0.88
SPOCK3-223ENST00000515143 PRKRIP1Q9H875 184 aaPredicted RBP9.56□□□□□ -0.88
SPOCK3-223ENST00000515143 MIS18AQ9NYP9 233 aa9.56□□□□□ -0.88
SPOCK3-223ENST00000515143 ZNF652Q9Y2D9 606 aa9.56□□□□□ -0.88
SPOCK3-223ENST00000515143 TOMM70O94826 608 aa9.55□□□□□ -0.88
SPOCK3-223ENST00000515143 RIPK4P57078 832 aa9.55□□□□□ -0.88
SPOCK3-223ENST00000515143 LMOD3Q0VAK6 560 aa9.55□□□□□ -0.88
SPOCK3-223ENST00000515143 PDIA6Q15084 440 aa9.55□□□□□ -0.88
SPOCK3-223ENST00000515143 TPTE2Q6XPS3 522 aa9.55□□□□□ -0.88
SPOCK3-223ENST00000515143 RUNDC1Q96C34 613 aa9.55□□□□□ -0.88
SPOCK3-223ENST00000515143 SCN7AQ01118 1682 aa9.55□□□□□ -0.88
SPOCK3-223ENST00000515143 LMNB1P20700 586 aa9.54□□□□□ -0.88
SPOCK3-223ENST00000515143 PRELPP51888 382 aa9.54□□□□□ -0.88
SPOCK3-223ENST00000515143 CACNB1Q02641 598 aaPredicted RBP9.54□□□□□ -0.88
SPOCK3-223ENST00000515143 CRY2Q49AN0 593 aa9.54□□□□□ -0.88
SPOCK3-223ENST00000515143 CNBD1Q8NA66 436 aa9.54□□□□□ -0.88
SPOCK3-223ENST00000515143 CNKSR1Q969H4 720 aa9.54□□□□□ -0.88
SPOCK3-223ENST00000515143 MASTLQ96GX5 879 aa9.54□□□□□ -0.88
SPOCK3-223ENST00000515143 ADAMTS8Q9UP79 889 aa9.54□□□□□ -0.88
SPOCK3-223ENST00000515143 TRIM35Q9UPQ4 493 aa9.54□□□□□ -0.88
SPOCK3-223ENST00000515143 DLEC1Q9Y238 1755 aa9.54□□□□□ -0.88
SPOCK3-223ENST00000515143 DLG5Q8TDM6 1919 aa9.54□□□□□ -0.88
SPOCK3-223ENST00000515143 MAP3K15Q6ZN16 1313 aa9.54□□□□□ -0.88
SPOCK3-223ENST00000515143 MAPK8IP3Q9UPT6 1336 aa9.54□□□□□ -0.88
SPOCK3-223ENST00000515143 SBF1O95248 1867 aa9.53□□□□□ -0.88
SPOCK3-223ENST00000515143 IBTKQ9P2D0 1353 aaPredicted RBP9.53□□□□□ -0.88
SPOCK3-223ENST00000515143 KDM3BQ7LBC6 1761 aa9.53□□□□□ -0.88
SPOCK3-223ENST00000515143 NFKBIEO00221 500 aa9.53□□□□□ -0.88
SPOCK3-223ENST00000515143 HOXB7P09629 217 aa9.53□□□□□ -0.88
SPOCK3-223ENST00000515143 ATXN8OSP0DMR3 200 aa9.53□□□□□ -0.88
SPOCK3-223ENST00000515143 HOXA10P31260 410 aaPredicted RBP9.53□□□□□ -0.88
SPOCK3-223ENST00000515143 HLFQ16534 295 aa9.53□□□□□ -0.88
SPOCK3-223ENST00000515143 SLC10A5Q5PT55 438 aa9.53□□□□□ -0.88
SPOCK3-223ENST00000515143 SOGA3Q5TF21 947 aa9.53□□□□□ -0.88
SPOCK3-223ENST00000515143 GIGYF2Q6Y7W6 1299 aaKnown RBP9.53□□□□□ -0.88
SPOCK3-223ENST00000515143 BICDL1Q6ZP65 573 aa9.53□□□□□ -0.88
SPOCK3-223ENST00000515143 ZNF34Q8IZ26 560 aa9.53□□□□□ -0.88
SPOCK3-223ENST00000515143 THUMPD2Q9BTF0 503 aaKnown RBP9.53□□□□□ -0.88
SPOCK3-223ENST00000515143 WWC3Q9ULE0 1092 aa9.53□□□□□ -0.88
SPOCK3-223ENST00000515143 RIC1Q4ADV7 1423 aa9.53□□□□□ -0.88
SPOCK3-223ENST00000515143 BCORQ6W2J9 1755 aa9.52□□□□□ -0.88
SPOCK3-223ENST00000515143 GLTPD2A6NH11 291 aa9.52□□□□□ -0.89
SPOCK3-223ENST00000515143 ZNF853P0CG23 659 aa9.52□□□□□ -0.89
SPOCK3-223ENST00000515143 NPR1P16066 1061 aa9.52□□□□□ -0.89
SPOCK3-223ENST00000515143 HSPA6P17066 643 aa9.52□□□□□ -0.89
SPOCK3-223ENST00000515143 ST5P78524 1137 aa9.52□□□□□ -0.89
SPOCK3-223ENST00000515143 NBPF5PQ86XG9 351 aaPredicted RBP9.52□□□□□ -0.89
SPOCK3-223ENST00000515143 ANKRD31Q8N7Z5 1873 aa9.52□□□□□ -0.89
SPOCK3-223ENST00000515143 RBM46Q8TBY0 533 aaKnown RBP9.52□□□□□ -0.89
SPOCK3-223ENST00000515143 NIP7Q9Y221 180 aaKnown RBP eCLIP9.52□□□□□ -0.89
SPOCK3-223ENST00000515143 KDM2BQ8NHM5 1336 aa9.52□□□□□ -0.89
SPOCK3-223ENST00000515143 CAPN15O75808 1086 aa9.51□□□□□ -0.89
SPOCK3-223ENST00000515143 ZEB1P37275 1124 aaPredicted RBP9.51□□□□□ -0.89
SPOCK3-223ENST00000515143 PIP4K2AP48426 406 aaPredicted RBP9.51□□□□□ -0.89
SPOCK3-223ENST00000515143 FSTL1Q12841 308 aa9.51□□□□□ -0.89
SPOCK3-223ENST00000515143 GRIPAP1Q4V328 841 aa9.51□□□□□ -0.89
SPOCK3-223ENST00000515143 CFAP44Q96MT7 982 aa9.51□□□□□ -0.89
SPOCK3-223ENST00000515143 NYXQ9GZU5 481 aa9.51□□□□□ -0.89
SPOCK3-223ENST00000515143 RNF181Q9P0P0 153 aa9.51□□□□□ -0.89
SPOCK3-223ENST00000515143 TSPYL4Q9UJ04 414 aa9.51□□□□□ -0.89
SPOCK3-223ENST00000515143 RNF123Q5XPI4 1314 aa9.51□□□□□ -0.89
SPOCK3-223ENST00000515143 POTECB2RU33 542 aa9.5□□□□□ -0.89
SPOCK3-223ENST00000515143 ALDH1B1P30837 517 aa9.5□□□□□ -0.89
SPOCK3-223ENST00000515143 PARP10Q53GL7 1025 aa9.5□□□□□ -0.89
SPOCK3-223ENST00000515143 PRPF40BQ6NWY9 871 aaKnown RBP9.5□□□□□ -0.89
SPOCK3-223ENST00000515143 TTLL7Q6ZT98 887 aa9.5□□□□□ -0.89
SPOCK3-223ENST00000515143 DNAJC5GQ8N7S2 189 aa9.5□□□□□ -0.89
SPOCK3-223ENST00000515143 NMRK2Q9NPI5 230 aa9.5□□□□□ -0.89
SPOCK3-223ENST00000515143 DDX21Q9NR30 783 aaKnown RBP eCLIP9.5□□□□□ -0.89
SPOCK3-223ENST00000515143 PCNTO95613 3336 aa9.49□□□□□ -0.89
SPOCK3-223ENST00000515143 SNED1Q8TER0 1413 aa9.49□□□□□ -0.89
SPOCK3-223ENST00000515143 SENP3-EIF4A1A0A087X0R7 540 aa9.49□□□□□ -0.89
SPOCK3-223ENST00000515143 C21orf2O43822 256 aa9.49□□□□□ -0.89
SPOCK3-223ENST00000515143 VEGFAP15692 232 aaPredicted RBP9.49□□□□□ -0.89
SPOCK3-223ENST00000515143 TRIM28Q13263 835 aaKnown RBP9.49□□□□□ -0.89
SPOCK3-223ENST00000515143 CC2D2BQ6DHV5 1058 aa9.49□□□□□ -0.89
SPOCK3-223ENST00000515143 RTKN2Q8IZC4 609 aa9.49□□□□□ -0.89
SPOCK3-223ENST00000515143 ZNF622Q969S3 477 aaKnown RBP eCLIP9.49□□□□□ -0.89
SPOCK3-223ENST00000515143 CRAMP1Q96RY5 1269 aa9.49□□□□□ -0.89
SPOCK3-223ENST00000515143 RRP7AQ9Y3A4 280 aaKnown RBP9.49□□□□□ -0.89
SPOCK3-223ENST00000515143 ZNF330Q9Y3S2 320 aaPredicted RBP9.49□□□□□ -0.89
SPOCK3-223ENST00000515143 LAMB4A4D0S4 1761 aa9.49□□□□□ -0.89
SPOCK3-223ENST00000515143 NTSR2O95665 410 aa9.48□□□□□ -0.89
SPOCK3-223ENST00000515143 APLP1P51693 650 aa9.48□□□□□ -0.89
SPOCK3-223ENST00000515143 RASSF7Q02833 373 aa9.48□□□□□ -0.89
SPOCK3-223ENST00000515143 WDR43Q15061 677 aaKnown RBP eCLIP9.48□□□□□ -0.89
SPOCK3-223ENST00000515143 CCDC27Q2M243 656 aa9.48□□□□□ -0.89
SPOCK3-223ENST00000515143 SUSD4Q5VX71 490 aa9.48□□□□□ -0.89
SPOCK3-223ENST00000515143 KIF6Q6ZMV9 814 aa9.48□□□□□ -0.89
SPOCK3-223ENST00000515143 ZNF526Q8TF50 670 aaPredicted RBP9.48□□□□□ -0.89
SPOCK3-223ENST00000515143 PSMD1Q99460 953 aa9.48□□□□□ -0.89
SPOCK3-223ENST00000515143 VPS33BQ9H267 617 aa9.48□□□□□ -0.89
SPOCK3-223ENST00000515143 FER1L6Q2WGJ9 1857 aa9.48□□□□□ -0.89
SPOCK3-223ENST00000515143 UBN2Q6ZU65 1347 aa9.48□□□□□ -0.89
SPOCK3-223ENST00000515143 SLX4Q8IY92 1834 aa9.47□□□□□ -0.89
SPOCK3-223ENST00000515143 TCIRG1Q13488 830 aa9.47□□□□□ -0.89
SPOCK3-223ENST00000515143 DPY19L2Q6NUT2 758 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms