RNA–Protein interactions for RNA: ENST00000515090.5

GPM6A-221, Transcript of glycoprotein M6A, human

TSL 2 BASIC

Gene GPM6A, Length 1,500 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GPM6A-221	ENST00000515090	ARSI	Q5FYB1	569 aa		10.8	□□□□□ -0.68
GPM6A-221	ENST00000515090	C1orf141	Q5JVX7	400 aa		10.8	□□□□□ -0.68
GPM6A-221	ENST00000515090	FLAD1	Q8NFF5	587 aa		10.8	□□□□□ -0.68
GPM6A-221	ENST00000515090	NPC1L1	Q9UHC9	1359 aa		10.8	□□□□□ -0.68
GPM6A-221	ENST00000515090	RNMT	O43148	476 aa	Known RBP	10.79	□□□□□ -0.68
GPM6A-221	ENST00000515090	HSP90AB1	P08238	724 aa	Known RBP	10.79	□□□□□ -0.68
GPM6A-221	ENST00000515090	AKAP4	Q5JQC9	854 aa		10.79	□□□□□ -0.68
GPM6A-221	ENST00000515090	SRP68	Q9UHB9	627 aa	Known RBP	10.79	□□□□□ -0.68
GPM6A-221	ENST00000515090	TJP1	Q07157	1748 aa		10.79	□□□□□ -0.68
GPM6A-221	ENST00000515090	INTS5	Q6P9B9	1019 aa	Known RBP	10.79	□□□□□ -0.68
GPM6A-221	ENST00000515090	ANKRD13D	Q6ZTN6	518 aa		10.79	□□□□□ -0.68
GPM6A-221	ENST00000515090	PHACTR3	Q96KR7	559 aa		10.79	□□□□□ -0.68
GPM6A-221	ENST00000515090	PLEKHG2	Q9H7P9	1386 aa		10.78	□□□□□ -0.68
GPM6A-221	ENST00000515090	U2SURP	O15042	1029 aa	Known RBP	10.78	□□□□□ -0.68
GPM6A-221	ENST00000515090	RPS6KA4	O75676	772 aa		10.78	□□□□□ -0.68
GPM6A-221	ENST00000515090	MMP10	P09238	476 aa		10.78	□□□□□ -0.68
GPM6A-221	ENST00000515090	GYS1	P13807	737 aa		10.78	□□□□□ -0.68
GPM6A-221	ENST00000515090	CRKL	P46109	303 aa	Known RBP	10.78	□□□□□ -0.68
GPM6A-221	ENST00000515090	TRAPPC3L	Q5T215	181 aa		10.78	□□□□□ -0.68
GPM6A-221	ENST00000515090	RC3H1	Q5TC82	1133 aa	Known RBP	10.78	□□□□□ -0.68
GPM6A-221	ENST00000515090	DNAJC10	Q8IXB1	793 aa		10.78	□□□□□ -0.68
GPM6A-221	ENST00000515090	IL17RE	Q8NFR9	667 aa		10.78	□□□□□ -0.68
GPM6A-221	ENST00000515090	RNF25	Q96BH1	459 aa	Predicted RBP	10.78	□□□□□ -0.68
GPM6A-221	ENST00000515090	SLC52A2	Q9HAB3	445 aa		10.78	□□□□□ -0.68
GPM6A-221	ENST00000515090	RTCB	Q9Y3I0	505 aa	Known RBP	10.78	□□□□□ -0.68
GPM6A-221	ENST00000515090	CD2AP	Q9Y5K6	639 aa		10.78	□□□□□ -0.68
GPM6A-221	ENST00000515090	ZNF831	Q5JPB2	1677 aa		10.77	□□□□□ -0.68
GPM6A-221	ENST00000515090	C4A	P0C0L4	1744 aa		10.77	□□□□□ -0.69
GPM6A-221	ENST00000515090	ZBED9	Q6R2W3	1325 aa		10.76	□□□□□ -0.69
GPM6A-221	ENST00000515090	MYBBP1A	Q9BQG0	1328 aa	Known RBP	10.76	□□□□□ -0.69
GPM6A-221	ENST00000515090	N4BP2	Q86UW6	1770 aa	Predicted RBP	10.76	□□□□□ -0.69
GPM6A-221	ENST00000515090	ADAMTS7	Q9UKP4	1686 aa		10.76	□□□□□ -0.69
GPM6A-221	ENST00000515090	KIAA1551	Q9HCM1	1747 aa		10.76	□□□□□ -0.69
GPM6A-221	ENST00000515090	CNTNAP4	Q9C0A0	1308 aa		10.76	□□□□□ -0.69
GPM6A-221	ENST00000515090	KCNQ3	O43525	872 aa		10.75	□□□□□ -0.69
GPM6A-221	ENST00000515090	PPP2R1A	P30153	589 aa		10.75	□□□□□ -0.69
GPM6A-221	ENST00000515090	MRS2	Q9HD23	443 aa		10.75	□□□□□ -0.69
GPM6A-221	ENST00000515090	KCP	Q6ZWJ8	1503 aa		10.75	□□□□□ -0.69
GPM6A-221	ENST00000515090		A0A0G2JLW4	131 aa		10.74	□□□□□ -0.69
GPM6A-221	ENST00000515090	CYP19A1	P11511	503 aa	Predicted RBP	10.74	□□□□□ -0.69
GPM6A-221	ENST00000515090	ERICH6B	Q5W0A0	696 aa		10.74	□□□□□ -0.69
GPM6A-221	ENST00000515090	MRC1	P22897	1456 aa		10.74	□□□□□ -0.69
GPM6A-221	ENST00000515090	CIC	Q96RK0	1608 aa	Predicted RBP	10.74	□□□□□ -0.69
GPM6A-221	ENST00000515090	RFC4	P35249	363 aa		10.74	□□□□□ -0.69
GPM6A-221	ENST00000515090	DDR1	Q08345	913 aa		10.74	□□□□□ -0.69
GPM6A-221	ENST00000515090	RSPH6A	Q9H0K4	717 aa		10.74	□□□□□ -0.69
GPM6A-221	ENST00000515090	TAOK2	Q9UL54	1235 aa		10.74	□□□□□ -0.69
GPM6A-221	ENST00000515090	KIF13B	Q9NQT8	1826 aa		10.73	□□□□□ -0.69
GPM6A-221	ENST00000515090	KCNA3	P22001	575 aa		10.73	□□□□□ -0.69
GPM6A-221	ENST00000515090	PRKAR2B	P31323	418 aa		10.73	□□□□□ -0.69
GPM6A-221	ENST00000515090	KHSRP	Q92945	711 aa	Known RBP eCLIP	10.73	□□□□□ -0.69
GPM6A-221	ENST00000515090	ZBTB1	Q9Y2K1	713 aa		10.73	□□□□□ -0.69
GPM6A-221	ENST00000515090	SIPA1L3	O60292	1781 aa	Predicted RBP	10.72	□□□□□ -0.69
GPM6A-221	ENST00000515090	NLGN1	Q8N2Q7	840 aa		10.72	□□□□□ -0.69
GPM6A-221	ENST00000515090	ZNF496	Q96IT1	587 aa	Predicted RBP	10.72	□□□□□ -0.69
GPM6A-221	ENST00000515090	BCL2L12	Q9HB09	334 aa		10.72	□□□□□ -0.69
GPM6A-221	ENST00000515090	CCDC87	Q9NVE4	849 aa		10.72	□□□□□ -0.69
GPM6A-221	ENST00000515090	PXDNL	A1KZ92	1463 aa		10.72	□□□□□ -0.69
GPM6A-221	ENST00000515090	UBR2	Q8IWV8	1755 aa		10.71	□□□□□ -0.69
GPM6A-221	ENST00000515090	PRAMEF22	A3QJZ6	481 aa		10.71	□□□□□ -0.69
GPM6A-221	ENST00000515090	GRIN3B	O60391	1043 aa		10.71	□□□□□ -0.69
GPM6A-221	ENST00000515090	DPEP1	P16444	411 aa		10.71	□□□□□ -0.69
GPM6A-221	ENST00000515090	TM4SF1	P30408	202 aa		10.71	□□□□□ -0.69
GPM6A-221	ENST00000515090	LSM11	P83369	360 aa	Known RBP eCLIP	10.71	□□□□□ -0.69
GPM6A-221	ENST00000515090	DCTN1	Q14203	1278 aa		10.71	□□□□□ -0.69
GPM6A-221	ENST00000515090	USPL1	Q5W0Q7	1092 aa		10.71	□□□□□ -0.69
GPM6A-221	ENST00000515090	SOS1	Q07889	1333 aa	Predicted RBP	10.71	□□□□□ -0.7
GPM6A-221	ENST00000515090	USP42	Q9H9J4	1324 aa	Known RBP	10.71	□□□□□ -0.7
GPM6A-221	ENST00000515090	GNAT3	A8MTJ3	354 aa		10.7	□□□□□ -0.7
GPM6A-221	ENST00000515090	HMGB2	P26583	209 aa	Known RBP	10.7	□□□□□ -0.7
GPM6A-221	ENST00000515090	HNRNPU	Q00839	825 aa	Known RBP eCLIP	10.7	□□□□□ -0.7
GPM6A-221	ENST00000515090	PNISR	Q8TF01	805 aa	Known RBP	10.7	□□□□□ -0.7
GPM6A-221	ENST00000515090	C10orf71	Q711Q0	1435 aa		10.7	□□□□□ -0.7
GPM6A-221	ENST00000515090	U2AF1L5	P0DN76	240 aa	Predicted RBP	10.69	□□□□□ -0.7
GPM6A-221	ENST00000515090	CANX	P27824	592 aa	Known RBP	10.69	□□□□□ -0.7
GPM6A-221	ENST00000515090	PIP4K2A	P48426	406 aa	Predicted RBP	10.69	□□□□□ -0.7
GPM6A-221	ENST00000515090	U2AF1	Q01081	240 aa	Known RBP eCLIP	10.69	□□□□□ -0.7
GPM6A-221	ENST00000515090	MCM10	Q7L590	875 aa		10.69	□□□□□ -0.7
GPM6A-221	ENST00000515090	CEP350	Q5VT06	3117 aa		10.69	□□□□□ -0.7
GPM6A-221	ENST00000515090	AFDN	P55196	1824 aa	Known RBP	10.69	□□□□□ -0.7
GPM6A-221	ENST00000515090	BRCA1	P38398	1863 aa	Known RBP	10.69	□□□□□ -0.7
GPM6A-221	ENST00000515090	POLRMT	O00411	1230 aa	Known RBP	10.68	□□□□□ -0.7
GPM6A-221	ENST00000515090	A1BG	P04217	495 aa		10.68	□□□□□ -0.7
GPM6A-221	ENST00000515090	CHRNA5	P30532	468 aa		10.68	□□□□□ -0.7
GPM6A-221	ENST00000515090	ZNF790	Q6PG37	636 aa		10.68	□□□□□ -0.7
GPM6A-221	ENST00000515090	ZNF526	Q8TF50	670 aa	Predicted RBP	10.68	□□□□□ -0.7
GPM6A-221	ENST00000515090	PARP3	Q9Y6F1	533 aa		10.68	□□□□□ -0.7
GPM6A-221	ENST00000515090	CEMIP	Q8WUJ3	1361 aa		10.68	□□□□□ -0.7
GPM6A-221	ENST00000515090	NFIX	Q14938	502 aa		10.68	□□□□□ -0.7
GPM6A-221	ENST00000515090	FBXO22	Q8NEZ5	403 aa		10.68	□□□□□ -0.7
GPM6A-221	ENST00000515090	GAS2L2	Q8NHY3	880 aa		10.68	□□□□□ -0.7
GPM6A-221	ENST00000515090	MIS18A	Q9NYP9	233 aa		10.68	□□□□□ -0.7
GPM6A-221	ENST00000515090	BCS1L	Q9Y276	419 aa		10.68	□□□□□ -0.7
GPM6A-221	ENST00000515090	USP16	Q9Y5T5	823 aa		10.68	□□□□□ -0.7
GPM6A-221	ENST00000515090	ATP10D	Q9P241	1426 aa		10.67	□□□□□ -0.7
GPM6A-221	ENST00000515090	PBX2	P40425	430 aa		10.67	□□□□□ -0.7
GPM6A-221	ENST00000515090	EIF5	P55010	431 aa	Known RBP	10.67	□□□□□ -0.7
GPM6A-221	ENST00000515090	C1QTNF8	P60827	252 aa		10.67	□□□□□ -0.7
GPM6A-221	ENST00000515090	TGFB2	P61812	414 aa		10.67	□□□□□ -0.7
GPM6A-221	ENST00000515090	TEF	Q10587	303 aa		10.67	□□□□□ -0.7

Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms