RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 FAM182BQ5T319 152 aa6.81□□□□□ -1.32
CAST-242ENST00000515063 LYPD4Q6UWN0 246 aa6.81□□□□□ -1.32
CAST-242ENST00000515063 C14orf37Q86TY3 774 aa6.81□□□□□ -1.32
CAST-242ENST00000515063 WHAMMQ8TF30 809 aa6.81□□□□□ -1.32
CAST-242ENST00000515063 CHMP7Q8WUX9 453 aaPredicted RBP6.81□□□□□ -1.32
CAST-242ENST00000515063 PHACTR1Q9C0D0 580 aa6.81□□□□□ -1.32
CAST-242ENST00000515063 ARHGEF15O94989 841 aa6.8□□□□□ -1.32
CAST-242ENST00000515063 MAPTP10636 758 aaKnown RBP6.8□□□□□ -1.32
CAST-242ENST00000515063 TNP2Q05952 138 aa6.8□□□□□ -1.32
CAST-242ENST00000515063 ELOAQ14241 798 aaKnown RBP6.8□□□□□ -1.32
CAST-242ENST00000515063 LRRC69Q6ZNQ3 347 aa6.8□□□□□ -1.32
CAST-242ENST00000515063 NEDD1Q8NHV4 660 aa6.8□□□□□ -1.32
CAST-242ENST00000515063 VTI1AQ96AJ9 217 aa6.8□□□□□ -1.32
CAST-242ENST00000515063 ACDQ96AP0 544 aa6.8□□□□□ -1.32
CAST-242ENST00000515063 KLRG1Q96E93 195 aa6.8□□□□□ -1.32
CAST-242ENST00000515063 SCARF2Q96GP6 870 aaPredicted RBP6.8□□□□□ -1.32
CAST-242ENST00000515063 C2orf49Q9BVC5 232 aaPredicted RBP6.8□□□□□ -1.32
CAST-242ENST00000515063 AVENQ9NQS1 362 aaPredicted RBP6.8□□□□□ -1.32
CAST-242ENST00000515063 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.8□□□□□ -1.321e-6■■■■□ 25.8
CAST-242ENST00000515063 NOVA2Q9UNW9 492 aaKnown RBP6.8□□□□□ -1.32
CAST-242ENST00000515063 ADAMTS8Q9UP79 889 aa6.8□□□□□ -1.32
CAST-242ENST00000515063 FOXO3O43524 673 aa6.79□□□□□ -1.32
CAST-242ENST00000515063 C21orf2O43822 256 aa6.79□□□□□ -1.32
CAST-242ENST00000515063 ARAFP10398 606 aa6.79□□□□□ -1.32
CAST-242ENST00000515063 SWI5Q1ZZU3 235 aa6.79□□□□□ -1.32
CAST-242ENST00000515063 PODNQ7Z5L7 613 aa6.79□□□□□ -1.32
CAST-242ENST00000515063 ARXQ96QS3 562 aa6.79□□□□□ -1.32
CAST-242ENST00000515063 HCN4Q9Y3Q4 1203 aa6.79□□□□□ -1.32
CAST-242ENST00000515063 OIP5O43482 229 aa6.78□□□□□ -1.32
CAST-242ENST00000515063 NEUROD1Q13562 356 aa6.78□□□□□ -1.32
CAST-242ENST00000515063 CDCA8Q53HL2 280 aa6.78□□□□□ -1.32
CAST-242ENST00000515063 SH3PXD2AQ5TCZ1 1133 aa6.78□□□□□ -1.32
CAST-242ENST00000515063 SLCO4C1Q6ZQN7 724 aa6.78□□□□□ -1.32
CAST-242ENST00000515063 ALDH16A1Q8IZ83 802 aa6.78□□□□□ -1.32
CAST-242ENST00000515063 PBXIP1Q96AQ6 731 aa6.78□□□□□ -1.32
CAST-242ENST00000515063 MARK1Q9P0L2 795 aa6.78□□□□□ -1.32
CAST-242ENST00000515063 ACIN1Q9UKV3 1341 aaKnown RBP6.77□□□□□ -1.32
CAST-242ENST00000515063 EFSO43281 561 aa6.77□□□□□ -1.33
CAST-242ENST00000515063 ATG7O95352 703 aa6.77□□□□□ -1.33
CAST-242ENST00000515063 CD33P20138 364 aa6.77□□□□□ -1.33
CAST-242ENST00000515063 ADH6P28332 368 aa6.77□□□□□ -1.33
CAST-242ENST00000515063 CTBSQ01459 385 aa6.77□□□□□ -1.33
CAST-242ENST00000515063 RTN1Q16799 776 aa6.77□□□□□ -1.33
CAST-242ENST00000515063 PRR12Q9ULL5 1215 aa6.77□□□□□ -1.33
CAST-242ENST00000515063 PHF20L1A8MW92 1017 aa6.76□□□□□ -1.33
CAST-242ENST00000515063 WEE1P30291 646 aa6.76□□□□□ -1.33
CAST-242ENST00000515063 KANK3Q6NY19 840 aa6.76□□□□□ -1.33
CAST-242ENST00000515063 NGLY1Q96IV0 654 aa6.76□□□□□ -1.33
CAST-242ENST00000515063 SUSD3Q96L08 255 aa6.76□□□□□ -1.33
CAST-242ENST00000515063 CEP63Q96MT8 703 aa6.76□□□□□ -1.33
CAST-242ENST00000515063 GGA1Q9UJY5 639 aa6.76□□□□□ -1.33
CAST-242ENST00000515063 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.75□□□□□ -1.33
CAST-242ENST00000515063 PIK3R2O00459 728 aa6.75□□□□□ -1.33
CAST-242ENST00000515063 KCNMA1Q12791 1236 aa6.75□□□□□ -1.33
CAST-242ENST00000515063 ZNF468Q5VIY5 522 aaPredicted RBP6.75□□□□□ -1.33
CAST-242ENST00000515063 IER5Q5VY09 327 aa6.75□□□□□ -1.33
CAST-242ENST00000515063 BEND7Q8N7W2 519 aaPredicted RBP6.75□□□□□ -1.33
CAST-242ENST00000515063 GALNT6Q8NCL4 622 aa6.75□□□□□ -1.33
CAST-242ENST00000515063 C7orf43Q8WVR3 580 aa6.75□□□□□ -1.33
CAST-242ENST00000515063 EDARADDQ8WWZ3 215 aa6.75□□□□□ -1.33
CAST-242ENST00000515063 ARID3CA6NKF2 412 aa6.74□□□□□ -1.33
CAST-242ENST00000515063 C2CD2LO14523 706 aa6.74□□□□□ -1.33
CAST-242ENST00000515063 EPB42P16452 691 aa6.74□□□□□ -1.33
CAST-242ENST00000515063 AMPD1P23109 780 aa6.74□□□□□ -1.33
CAST-242ENST00000515063 HSH2DQ96JZ2 352 aa6.74□□□□□ -1.33
CAST-242ENST00000515063 BRD7Q9NPI1 651 aa6.74□□□□□ -1.33
CAST-242ENST00000515063 DNMT3AQ9Y6K1 912 aaPredicted RBP6.74□□□□□ -1.33
CAST-242ENST00000515063 NEURL1BA8MQ27 555 aa6.73□□□□□ -1.33
CAST-242ENST00000515063 TGFBR3LH3BV60 316 aa6.73□□□□□ -1.33
CAST-242ENST00000515063 PPP1R15AO75807 674 aaPredicted RBP6.73□□□□□ -1.33
CAST-242ENST00000515063 EPXP11678 715 aa6.73□□□□□ -1.33
CAST-242ENST00000515063 KCNQ4P56696 695 aa6.73□□□□□ -1.33
CAST-242ENST00000515063 SRPK2P78362 688 aaKnown RBP6.73□□□□□ -1.33
CAST-242ENST00000515063 LGR5O75473 907 aa6.72□□□□□ -1.33
CAST-242ENST00000515063 TYRO3Q06418 890 aa6.72□□□□□ -1.33
CAST-242ENST00000515063 BTLAQ7Z6A9 289 aa6.72□□□□□ -1.33
CAST-242ENST00000515063 EFCC1Q9HA90 598 aa6.72□□□□□ -1.33
CAST-242ENST00000515063 RRAGCQ9HB90 399 aa6.72□□□□□ -1.33
CAST-242ENST00000515063 MKL2Q9ULH7 1088 aa6.72□□□□□ -1.33
CAST-242ENST00000515063 ZMIZ1Q9ULJ6 1067 aa6.72□□□□□ -1.33
CAST-242ENST00000515063 KCNH4Q9UQ05 1017 aa6.72□□□□□ -1.33
CAST-242ENST00000515063 SIN3BO75182 1162 aa6.71□□□□□ -1.34
CAST-242ENST00000515063 SPEM2Q0P670 501 aa6.71□□□□□ -1.34
CAST-242ENST00000515063 TMEM151AQ8N4L1 468 aa6.71□□□□□ -1.34
CAST-242ENST00000515063 CCDC82Q8N4S0 544 aa6.71□□□□□ -1.34
CAST-242ENST00000515063 ZNF280CQ8ND82 737 aa6.71□□□□□ -1.34
CAST-242ENST00000515063 STK32AQ8WU08 396 aa6.71□□□□□ -1.34
CAST-242ENST00000515063 MYO19Q96H55 970 aa6.71□□□□□ -1.34
CAST-242ENST00000515063 STRN4Q9NRL3 753 aa6.71□□□□□ -1.34
CAST-242ENST00000515063 ALAS2P22557 587 aa6.7□□□□□ -1.34
CAST-242ENST00000515063 IRS1P35568 1242 aa6.7□□□□□ -1.34
CAST-242ENST00000515063 RASSF7Q02833 373 aa6.7□□□□□ -1.34
CAST-242ENST00000515063 SFSWAPQ12872 951 aaKnown RBP6.7□□□□□ -1.34
CAST-242ENST00000515063 TMEM164Q5U3C3 297 aa6.7□□□□□ -1.34
CAST-242ENST00000515063 SYT9Q86SS6 491 aa6.7□□□□□ -1.34
CAST-242ENST00000515063 COL26A1Q96A83 441 aa6.7□□□□□ -1.34
CAST-242ENST00000515063 ELOA3CA0A087WX78 387 aaPredicted RBP6.69□□□□□ -1.34
CAST-242ENST00000515063 ELOA3DA6NLF2 546 aaPredicted RBP6.69□□□□□ -1.34
CAST-242ENST00000515063 SHISA8B8ZZ34 492 aa6.69□□□□□ -1.34
CAST-242ENST00000515063 PRMT3O60678 531 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms