RNA–Protein interactions for RNA: ENST00000514778.1

SMAD1-213, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 616 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-213ENST00000514778 C5P01031 1676 aa9.22□□□□□ -0.93
SMAD1-213ENST00000514778 G3V3G9 751 aa9.21□□□□□ -0.94
SMAD1-213ENST00000514778 GIGYF1O75420 1035 aaPredicted RBP9.21□□□□□ -0.94
SMAD1-213ENST00000514778 ITPK1Q13572 414 aa9.21□□□□□ -0.94
SMAD1-213ENST00000514778 EFCAB3Q8N7B9 438 aa9.21□□□□□ -0.94
SMAD1-213ENST00000514778 MYH16Q9H6N6 1097 aa9.21□□□□□ -0.94
SMAD1-213ENST00000514778 TAOK2Q9UL54 1235 aa9.21□□□□□ -0.94
SMAD1-213ENST00000514778 NUP188Q5SRE5 1749 aa9.21□□□□□ -0.94
SMAD1-213ENST00000514778 ERBB4Q15303 1308 aa9.21□□□□□ -0.94
SMAD1-213ENST00000514778 KDM3BQ7LBC6 1761 aa9.21□□□□□ -0.94
SMAD1-213ENST00000514778 VIRMAQ69YN4 1812 aaKnown RBP9.21□□□□□ -0.94
SMAD1-213ENST00000514778 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.2□□□□□ -0.94
SMAD1-213ENST00000514778 ST18O60284 1047 aa9.2□□□□□ -0.94
SMAD1-213ENST00000514778 CYP19A1P11511 503 aaPredicted RBP9.2□□□□□ -0.94
SMAD1-213ENST00000514778 SSFA2P28290 1259 aa9.2□□□□□ -0.94
SMAD1-213ENST00000514778 DPY19L2Q6NUT2 758 aa9.2□□□□□ -0.94
SMAD1-213ENST00000514778 LINC00116Q8NCU8 138 aa9.2□□□□□ -0.94
SMAD1-213ENST00000514778 SLC16A10Q8TF71 515 aa9.2□□□□□ -0.94
SMAD1-213ENST00000514778 ZFP91Q96JP5 570 aaPredicted RBP9.2□□□□□ -0.94
SMAD1-213ENST00000514778 MBIPQ9NS73 344 aa9.2□□□□□ -0.94
SMAD1-213ENST00000514778 E9PSI1 815 aa9.19□□□□□ -0.94
SMAD1-213ENST00000514778 KCNQ3O43525 872 aa9.19□□□□□ -0.94
SMAD1-213ENST00000514778 RPS6KA4O75676 772 aa9.19□□□□□ -0.94
SMAD1-213ENST00000514778 DNAJC10Q8IXB1 793 aa9.19□□□□□ -0.94
SMAD1-213ENST00000514778 AK7Q96M32 723 aa9.19□□□□□ -0.94
SMAD1-213ENST00000514778 CCDC87Q9NVE4 849 aa9.19□□□□□ -0.94
SMAD1-213ENST00000514778 MIS18AQ9NYP9 233 aa9.19□□□□□ -0.94
SMAD1-213ENST00000514778 TFCP2L1Q9NZI6 479 aa9.19□□□□□ -0.94
SMAD1-213ENST00000514778 BOLA1Q9Y3E2 137 aa9.19□□□□□ -0.94
SMAD1-213ENST00000514778 C4BP0C0L5 1744 aa9.19□□□□□ -0.94
SMAD1-213ENST00000514778 RGL2O15211 777 aa9.18□□□□□ -0.94
SMAD1-213ENST00000514778 COL5A3P25940 1745 aaPredicted RBP9.18□□□□□ -0.94
SMAD1-213ENST00000514778 IL6STP40189 918 aaPredicted RBP9.18□□□□□ -0.94
SMAD1-213ENST00000514778 TJP1Q07157 1748 aa9.18□□□□□ -0.94
SMAD1-213ENST00000514778 QSER1Q2KHR3 1735 aa9.18□□□□□ -0.94
SMAD1-213ENST00000514778 INTS5Q6P9B9 1019 aaKnown RBP9.18□□□□□ -0.94
SMAD1-213ENST00000514778 TMEM121BQ9BXQ6 578 aaPredicted RBP9.18□□□□□ -0.94
SMAD1-213ENST00000514778 RTCBQ9Y3I0 505 aaKnown RBP9.18□□□□□ -0.94
SMAD1-213ENST00000514778 LAS1LQ9Y4W2 734 aaKnown RBP9.18□□□□□ -0.94
SMAD1-213ENST00000514778 A0A087WZG4 1122 aa9.17□□□□□ -0.94
SMAD1-213ENST00000514778 CRKLP46109 303 aaKnown RBP9.17□□□□□ -0.94
SMAD1-213ENST00000514778 ZNF827Q17R98 1081 aa9.17□□□□□ -0.94
SMAD1-213ENST00000514778 TRAPPC3LQ5T215 181 aa9.17□□□□□ -0.94
SMAD1-213ENST00000514778 TRMT2AQ8IZ69 625 aaKnown RBP9.17□□□□□ -0.94
SMAD1-213ENST00000514778 ANO8Q9HCE9 1232 aaPredicted RBP9.17□□□□□ -0.94
SMAD1-213ENST00000514778 TAF1LQ8IZX4 1826 aa9.17□□□□□ -0.94
SMAD1-213ENST00000514778 ZBED9Q6R2W3 1325 aa9.16□□□□□ -0.94
SMAD1-213ENST00000514778 FANCIQ9NVI1 1328 aa9.16□□□□□ -0.94
SMAD1-213ENST00000514778 GNPATO15228 680 aa9.16□□□□□ -0.94
SMAD1-213ENST00000514778 CT47B1P0C2W7 299 aaPredicted RBP9.16□□□□□ -0.94
SMAD1-213ENST00000514778 EIF5P55010 431 aaKnown RBP9.16□□□□□ -0.94
SMAD1-213ENST00000514778 KCNQ4P56696 695 aa9.16□□□□□ -0.94
SMAD1-213ENST00000514778 HNRNPUQ00839 825 aaKnown RBP eCLIP9.16□□□□□ -0.94
SMAD1-213ENST00000514778 SLFN5Q08AF3 891 aa9.16□□□□□ -0.94
SMAD1-213ENST00000514778 NPM2Q86SE8 214 aaKnown RBP9.16□□□□□ -0.94
SMAD1-213ENST00000514778 ZNF428Q96B54 188 aa9.16□□□□□ -0.94
SMAD1-213ENST00000514778 SALL2Q9Y467 1007 aaPredicted RBP9.16□□□□□ -0.94
SMAD1-213ENST00000514778 USP16Q9Y5T5 823 aa9.16□□□□□ -0.94
SMAD1-213ENST00000514778 KAT6BQ8WYB5 2073 aa9.16□□□□□ -0.94
SMAD1-213ENST00000514778 PNPLA7Q6ZV29 1317 aa9.15□□□□□ -0.94
SMAD1-213ENST00000514778 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.15□□□□□ -0.94
SMAD1-213ENST00000514778 R3HDM1Q15032 1099 aaKnown RBP9.15□□□□□ -0.94
SMAD1-213ENST00000514778 DUSP27Q5VZP5 1158 aa9.15□□□□□ -0.94
SMAD1-213ENST00000514778 DBF4Q9UBU7 674 aaPredicted RBP9.15□□□□□ -0.94
SMAD1-213ENST00000514778 LAMB4A4D0S4 1761 aa9.14□□□□□ -0.95
SMAD1-213ENST00000514778 ECM2O94769 699 aaPredicted RBP9.14□□□□□ -0.95
SMAD1-213ENST00000514778 TWISTNBQ3B726 338 aaPredicted RBP9.14□□□□□ -0.95
SMAD1-213ENST00000514778 CCDC30Q5VVM6 783 aa9.14□□□□□ -0.95
SMAD1-213ENST00000514778 COL23A1Q86Y22 540 aaPredicted RBP9.14□□□□□ -0.95
SMAD1-213ENST00000514778 ARHGEF1Q92888 912 aaKnown RBP9.14□□□□□ -0.95
SMAD1-213ENST00000514778 MTFR1LQ9H019 292 aa9.14□□□□□ -0.95
SMAD1-213ENST00000514778 DDX21Q9NR30 783 aaKnown RBP eCLIP9.14□□□□□ -0.95
SMAD1-213ENST00000514778 ZBTB1Q9Y2K1 713 aa9.14□□□□□ -0.95
SMAD1-213ENST00000514778 PRAMEF22A3QJZ6 481 aa9.13□□□□□ -0.95
SMAD1-213ENST00000514778 NBPF26B4DH59 902 aa9.13□□□□□ -0.95
SMAD1-213ENST00000514778 A1BGP04217 495 aa9.13□□□□□ -0.95
SMAD1-213ENST00000514778 CANXP27824 592 aaKnown RBP9.13□□□□□ -0.95
SMAD1-213ENST00000514778 RFC4P35249 363 aa9.13□□□□□ -0.95
SMAD1-213ENST00000514778 HDGFL1Q5TGJ6 251 aa9.13□□□□□ -0.95
SMAD1-213ENST00000514778 NBPF10Q6P3W6 841 aaKnown RBP9.13□□□□□ -0.95
SMAD1-213ENST00000514778 CLEC4GQ6UXB4 293 aa9.13□□□□□ -0.95
SMAD1-213ENST00000514778 NLGN1Q8N2Q7 840 aa9.13□□□□□ -0.95
SMAD1-213ENST00000514778 NBPF15Q8N660 670 aa9.13□□□□□ -0.95
SMAD1-213ENST00000514778 C8orf58Q8NAV2 365 aa9.13□□□□□ -0.95
SMAD1-213ENST00000514778 TSR2Q969E8 191 aaKnown RBP9.13□□□□□ -0.95
SMAD1-213ENST00000514778 HYPKQ9NX55 129 aa9.13□□□□□ -0.95
SMAD1-213ENST00000514778 NARFQ9UHQ1 456 aa9.13□□□□□ -0.95
SMAD1-213ENST00000514778 UBR3Q6ZT12 1888 aa9.13□□□□□ -0.95
SMAD1-213ENST00000514778 COL15A1P39059 1388 aa9.12□□□□□ -0.95
SMAD1-213ENST00000514778 CASZ1Q86V15 1759 aa9.12□□□□□ -0.95
SMAD1-213ENST00000514778 USP42Q9H9J4 1324 aaKnown RBP9.12□□□□□ -0.95
SMAD1-213ENST00000514778 ERVV-1B6SEH8 477 aa9.12□□□□□ -0.95
SMAD1-213ENST00000514778 ZPR1O75312 459 aa9.12□□□□□ -0.95
SMAD1-213ENST00000514778 VAMP4O75379 141 aa9.12□□□□□ -0.95
SMAD1-213ENST00000514778 EXOSC9Q06265 439 aaKnown RBP9.12□□□□□ -0.95
SMAD1-213ENST00000514778 PDIA6Q15084 440 aa9.12□□□□□ -0.95
SMAD1-213ENST00000514778 PSDA5PKW4 1024 aaPredicted RBP9.11□□□□□ -0.95
SMAD1-213ENST00000514778 EIF2S2P20042 333 aaKnown RBP9.11□□□□□ -0.95
SMAD1-213ENST00000514778 KRT24Q2M2I5 525 aa9.11□□□□□ -0.95
SMAD1-213ENST00000514778 LRP10Q7Z4F1 713 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms