RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 EIF4A1P60842 406 aaKnown RBP17.6■□□□□ 0.41
PFDN1-206ENST00000514611 HLFQ16534 295 aa17.6■□□□□ 0.41
PFDN1-206ENST00000514611 CLEC4GQ6UXB4 293 aa17.6■□□□□ 0.41
PFDN1-206ENST00000514611 NBPF5PQ86XG9 351 aaPredicted RBP17.6■□□□□ 0.41
PFDN1-206ENST00000514611 PNISRQ8TF01 805 aaKnown RBP17.6■□□□□ 0.41
PFDN1-206ENST00000514611 PDZRN3Q9UPQ7 1066 aa17.6■□□□□ 0.41
PFDN1-206ENST00000514611 KDM2BQ8NHM5 1336 aa17.6■□□□□ 0.41
PFDN1-206ENST00000514611 TIAM2Q8IVF5 1701 aa17.6■□□□□ 0.41
PFDN1-206ENST00000514611 NIP7Q9Y221 180 aaKnown RBP eCLIP17.59■□□□□ 0.41
PFDN1-206ENST00000514611 TNRC6CQ9HCJ0 1690 aaKnown RBP17.58■□□□□ 0.41
PFDN1-206ENST00000514611 ZC3H4Q9UPT8 1303 aaKnown RBP17.58■□□□□ 0.4
PFDN1-206ENST00000514611 FAM177BA6PVY3 158 aa17.58■□□□□ 0.4
PFDN1-206ENST00000514611 SRGNP10124 158 aa17.58■□□□□ 0.4
PFDN1-206ENST00000514611 NGEFQ8N5V2 710 aa17.58■□□□□ 0.4
PFDN1-206ENST00000514611 PNNQ9H307 717 aaKnown RBP17.58■□□□□ 0.4
PFDN1-206ENST00000514611 RRAGCQ9HB90 399 aa17.58■□□□□ 0.4
PFDN1-206ENST00000514611 MYBBP1AQ9BQG0 1328 aaKnown RBP17.57■□□□□ 0.4
PFDN1-206ENST00000514611 PRPF40BQ6NWY9 871 aaKnown RBP17.57■□□□□ 0.4
PFDN1-206ENST00000514611 C16orf71Q8IYS4 520 aaPredicted RBP17.57■□□□□ 0.4
PFDN1-206ENST00000514611 MYL6BP14649 208 aa17.56■□□□□ 0.4
PFDN1-206ENST00000514611 RIPK4P57078 832 aa17.56■□□□□ 0.4
PFDN1-206ENST00000514611 STYK1Q6J9G0 422 aa17.56■□□□□ 0.4
PFDN1-206ENST00000514611 RBM46Q8TBY0 533 aaKnown RBP17.56■□□□□ 0.4
PFDN1-206ENST00000514611 CNKSR1Q969H4 720 aa17.56■□□□□ 0.4
PFDN1-206ENST00000514611 MASTLQ96GX5 879 aa17.56■□□□□ 0.4
PFDN1-206ENST00000514611 TSPYL4Q9UJ04 414 aa17.56■□□□□ 0.4
PFDN1-206ENST00000514611 RRP7AQ9Y3A4 280 aaKnown RBP17.56■□□□□ 0.4
PFDN1-206ENST00000514611 CACNA1SQ13698 1873 aa17.55■□□□□ 0.4
PFDN1-206ENST00000514611 RGL2O15211 777 aa17.55■□□□□ 0.4
PFDN1-206ENST00000514611 TTLL7Q6ZT98 887 aa17.55■□□□□ 0.4
PFDN1-206ENST00000514611 CCDC146Q8IYE0 955 aa17.55■□□□□ 0.4
PFDN1-206ENST00000514611 SLX4Q8IY92 1834 aa17.55■□□□□ 0.4
PFDN1-206ENST00000514611 ABCC12Q96J65 1359 aa17.54■□□□□ 0.4
PFDN1-206ENST00000514611 ARFGEF2Q9Y6D5 1785 aa17.54■□□□□ 0.4
PFDN1-206ENST00000514611 GLTPD2A6NH11 291 aa17.54■□□□□ 0.4
PFDN1-206ENST00000514611 TMPOP42166 694 aaKnown RBP17.54■□□□□ 0.4
PFDN1-206ENST00000514611 TAOK3Q9H2K8 898 aa17.54■□□□□ 0.4
PFDN1-206ENST00000514611 FER1L6Q2WGJ9 1857 aa17.54■□□□□ 0.4
PFDN1-206ENST00000514611 MAP3K15Q6ZN16 1313 aa17.53■□□□□ 0.4
PFDN1-206ENST00000514611 APLP1P51693 650 aa17.53■□□□□ 0.4
PFDN1-206ENST00000514611 TPTE2Q6XPS3 522 aa17.53■□□□□ 0.4
PFDN1-206ENST00000514611 KIF6Q6ZMV9 814 aa17.53■□□□□ 0.4
PFDN1-206ENST00000514611 ZBTB3Q9H5J0 574 aa17.53■□□□□ 0.4
PFDN1-206ENST00000514611 UBN2Q6ZU65 1347 aa17.52■□□□□ 0.4
PFDN1-206ENST00000514611 LTBP3Q9NS15 1303 aa17.52■□□□□ 0.4
PFDN1-206ENST00000514611 KLRG2A4D1S0 409 aaPredicted RBP17.52■□□□□ 0.4
PFDN1-206ENST00000514611 NPR1P16066 1061 aa17.52■□□□□ 0.4
PFDN1-206ENST00000514611 ERFEQ4G0M1 354 aa17.52■□□□□ 0.4
PFDN1-206ENST00000514611 NUTM1Q86Y26 1132 aa17.52■□□□□ 0.4
PFDN1-206ENST00000514611 ERVV-1B6SEH8 477 aa17.51■□□□□ 0.39
PFDN1-206ENST00000514611 GPTP24298 496 aa17.51■□□□□ 0.39
PFDN1-206ENST00000514611 HTRA3P83110 453 aa17.51■□□□□ 0.39
PFDN1-206ENST00000514611 OLFM4Q6UX06 510 aa17.51■□□□□ 0.39
PFDN1-206ENST00000514611 CCDC88AQ3V6T2 1871 aa17.5■□□□□ 0.39
PFDN1-206ENST00000514611 GTF2E1P29083 439 aaPredicted RBP17.5■□□□□ 0.39
PFDN1-206ENST00000514611 LMOD3Q0VAK6 560 aa17.5■□□□□ 0.39
PFDN1-206ENST00000514611 FSTL1Q12841 308 aa17.5■□□□□ 0.39
PFDN1-206ENST00000514611 NEUROD2Q15784 382 aa17.5■□□□□ 0.39
PFDN1-206ENST00000514611 SOGA3Q5TF21 947 aa17.5■□□□□ 0.39
PFDN1-206ENST00000514611 C7orf43Q8WVR3 580 aa17.5■□□□□ 0.39
PFDN1-206ENST00000514611 WDR90Q96KV7 1748 aa17.5■□□□□ 0.39
PFDN1-206ENST00000514611 ERBB4Q15303 1308 aa17.49■□□□□ 0.39
PFDN1-206ENST00000514611 ANXA1P04083 346 aa17.49■□□□□ 0.39
PFDN1-206ENST00000514611 EIF2S2P20042 333 aaKnown RBP17.49■□□□□ 0.39
PFDN1-206ENST00000514611 PROSER3Q2NL68 480 aa17.49■□□□□ 0.39
PFDN1-206ENST00000514611 CCDC93Q567U6 631 aa17.49■□□□□ 0.39
PFDN1-206ENST00000514611 LRP10Q7Z4F1 713 aa17.49■□□□□ 0.39
PFDN1-206ENST00000514611 POTECB2RU33 542 aa17.48■□□□□ 0.39
PFDN1-206ENST00000514611 VEGFAP15692 232 aaPredicted RBP17.48■□□□□ 0.39
PFDN1-206ENST00000514611 WDR43Q15061 677 aaKnown RBP eCLIP17.48■□□□□ 0.39
PFDN1-206ENST00000514611 PDIA6Q15084 440 aa17.48■□□□□ 0.39
PFDN1-206ENST00000514611 SMC1BQ8NDV3 1235 aa17.48■□□□□ 0.39
PFDN1-206ENST00000514611 NYXQ9GZU5 481 aa17.48■□□□□ 0.39
PFDN1-206ENST00000514611 NUP98P52948 1817 aa17.47■□□□□ 0.39
PFDN1-206ENST00000514611 KRT24Q2M2I5 525 aa17.47■□□□□ 0.39
PFDN1-206ENST00000514611 NECTIN2Q92692 538 aa17.47■□□□□ 0.39
PFDN1-206ENST00000514611 BABAM1Q9NWV8 329 aa17.47■□□□□ 0.39
PFDN1-206ENST00000514611 IBTKQ9P2D0 1353 aaPredicted RBP17.47■□□□□ 0.39
PFDN1-206ENST00000514611 CRY2Q49AN0 593 aa17.46■□□□□ 0.39
PFDN1-206ENST00000514611 SUSD4Q5VX71 490 aa17.46■□□□□ 0.39
PFDN1-206ENST00000514611 DPY19L2Q6NUT2 758 aa17.46■□□□□ 0.39
PFDN1-206ENST00000514611 ZNF34Q8IZ26 560 aa17.46■□□□□ 0.39
PFDN1-206ENST00000514611 DNAJC5GQ8N7S2 189 aa17.46■□□□□ 0.39
PFDN1-206ENST00000514611 RUNDC1Q96C34 613 aa17.46■□□□□ 0.39
PFDN1-206ENST00000514611 TRIM35Q9UPQ4 493 aa17.46■□□□□ 0.39
PFDN1-206ENST00000514611 DICER1Q9UPY3 1922 aaKnown RBP17.46■□□□□ 0.39
PFDN1-206ENST00000514611 RIC1Q4ADV7 1423 aa17.46■□□□□ 0.39
PFDN1-206ENST00000514611 DDNO94850 711 aaPredicted RBP17.45■□□□□ 0.38
PFDN1-206ENST00000514611 NTSR2O95665 410 aa17.45■□□□□ 0.38
PFDN1-206ENST00000514611 FKBP4Q02790 459 aaKnown RBP eCLIP17.45■□□□□ 0.38
PFDN1-206ENST00000514611 GIGYF2Q6Y7W6 1299 aaKnown RBP17.45■□□□□ 0.38
PFDN1-206ENST00000514611 SLC51AQ86UW1 340 aa17.45■□□□□ 0.38
PFDN1-206ENST00000514611 PRKRIP1Q9H875 184 aaPredicted RBP17.45■□□□□ 0.38
PFDN1-206ENST00000514611 ZNF277Q9NRM2 450 aaPredicted RBP17.45■□□□□ 0.38
PFDN1-206ENST00000514611 ADAMTS8Q9UP79 889 aa17.45■□□□□ 0.38
PFDN1-206ENST00000514611 SNED1Q8TER0 1413 aa17.45■□□□□ 0.38
PFDN1-206ENST00000514611 C3orf67Q6ZVT6 689 aa17.44■□□□□ 0.38
PFDN1-206ENST00000514611 LAS1LQ9Y4W2 734 aaKnown RBP17.44■□□□□ 0.38
PFDN1-206ENST00000514611 ALDH1B1P30837 517 aa17.43■□□□□ 0.38
PFDN1-206ENST00000514611 CHL1O00533 1208 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms