RNA–Protein interactions for RNA: ENST00000514552.5

PDE4D-222, Transcript of phosphodiesterase 4D, humanhuman

TSL 3

Gene PDE4D, Length 494 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-222ENST00000514552 DIP2CQ9Y2E4 1556 aa10.98□□□□□ -0.65
PDE4D-222ENST00000514552 CDC42BPBQ9Y5S2 1711 aa10.98□□□□□ -0.65
PDE4D-222ENST00000514552 STAU1O95793 577 aaKnown RBP10.97□□□□□ -0.65
PDE4D-222ENST00000514552 GPC1P35052 558 aa10.97□□□□□ -0.65
PDE4D-222ENST00000514552 FBXO41Q8TF61 875 aa10.97□□□□□ -0.65
PDE4D-222ENST00000514552 HRH3Q9Y5N1 445 aa10.97□□□□□ -0.65
PDE4D-222ENST00000514552 ACIN1Q9UKV3 1341 aaKnown RBP10.97□□□□□ -0.65
PDE4D-222ENST00000514552 AGLP35573 1532 aa10.97□□□□□ -0.65
PDE4D-222ENST00000514552 PREX1Q8TCU6 1659 aa10.97□□□□□ -0.65
PDE4D-222ENST00000514552 ITSN2Q9NZM3 1697 aa10.96□□□□□ -0.65
PDE4D-222ENST00000514552 BACH1O14867 736 aa10.96□□□□□ -0.65
PDE4D-222ENST00000514552 RNF144AP50876 292 aaPredicted RBP10.96□□□□□ -0.65
PDE4D-222ENST00000514552 KIFC2Q96AC6 838 aa10.96□□□□□ -0.65
PDE4D-222ENST00000514552 SLC4A9Q96Q91 983 aa10.96□□□□□ -0.65
PDE4D-222ENST00000514552 POLMQ9NP87 494 aaPredicted RBP10.96□□□□□ -0.65
PDE4D-222ENST00000514552 NOVA2Q9UNW9 492 aaKnown RBP10.96□□□□□ -0.65
PDE4D-222ENST00000514552 ABCA6Q8N139 1617 aa10.95□□□□□ -0.66
PDE4D-222ENST00000514552 SOS2Q07890 1332 aaPredicted RBP10.95□□□□□ -0.66
PDE4D-222ENST00000514552 M0R2N6 131 aa10.95□□□□□ -0.66
PDE4D-222ENST00000514552 CTSOP43234 321 aaPredicted RBP10.95□□□□□ -0.66
PDE4D-222ENST00000514552 SEC13P55735 322 aa10.95□□□□□ -0.66
PDE4D-222ENST00000514552 DPYDQ12882 1025 aa10.95□□□□□ -0.66
PDE4D-222ENST00000514552 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.95□□□□□ -0.66
PDE4D-222ENST00000514552 ARXQ96QS3 562 aa10.95□□□□□ -0.66
PDE4D-222ENST00000514552 ZNF358Q9NW07 568 aa10.95□□□□□ -0.66
PDE4D-222ENST00000514552 TTLL8A6PVC2 850 aa10.94□□□□□ -0.66
PDE4D-222ENST00000514552 CENPCQ03188 943 aa10.94□□□□□ -0.66
PDE4D-222ENST00000514552 FAM200AQ8TCP9 573 aa10.94□□□□□ -0.66
PDE4D-222ENST00000514552 GMPR2Q9P2T1 348 aaKnown RBP10.94□□□□□ -0.66
PDE4D-222ENST00000514552 CDC42BPAQ5VT25 1732 aa10.93□□□□□ -0.66
PDE4D-222ENST00000514552 FOXD4L5Q5VV16 416 aaPredicted RBP10.93□□□□□ -0.66
PDE4D-222ENST00000514552 TRIM47Q96LD4 638 aa10.93□□□□□ -0.66
PDE4D-222ENST00000514552 SERTAD1Q9UHV2 236 aa10.93□□□□□ -0.66
PDE4D-222ENST00000514552 SFI1A8K8P3 1242 aa10.92□□□□□ -0.66
PDE4D-222ENST00000514552 SMTNP53814 917 aa10.92□□□□□ -0.66
PDE4D-222ENST00000514552 RNF217Q8TC41 542 aa10.92□□□□□ -0.66
PDE4D-222ENST00000514552 FHDC1Q9C0D6 1143 aaPredicted RBP10.92□□□□□ -0.66
PDE4D-222ENST00000514552 GRIP2Q9C0E4 1043 aa10.92□□□□□ -0.66
PDE4D-222ENST00000514552 ZMIZ1Q9ULJ6 1067 aa10.92□□□□□ -0.66
PDE4D-222ENST00000514552 MTFR1Q15390 333 aa10.91□□□□□ -0.66
PDE4D-222ENST00000514552 TLR1Q15399 786 aa10.91□□□□□ -0.66
PDE4D-222ENST00000514552 PLEKHH2Q8IVE3 1493 aa10.91□□□□□ -0.66
PDE4D-222ENST00000514552 CNTLNQ9NXG0 1405 aa10.91□□□□□ -0.66
PDE4D-222ENST00000514552 KIDINS220Q9ULH0 1771 aa10.9□□□□□ -0.66
PDE4D-222ENST00000514552 A6NJY4 79 aa10.9□□□□□ -0.66
PDE4D-222ENST00000514552 SLC27A3Q5K4L6 730 aa10.9□□□□□ -0.66
PDE4D-222ENST00000514552 AFAP1Q8N556 730 aa10.9□□□□□ -0.66
PDE4D-222ENST00000514552 UHRF1BP1Q6BDS2 1440 aa10.9□□□□□ -0.66
PDE4D-222ENST00000514552 TRAPPC8Q9Y2L5 1435 aa10.9□□□□□ -0.66
PDE4D-222ENST00000514552 SAMD9LQ8IVG5 1584 aa10.9□□□□□ -0.67
PDE4D-222ENST00000514552 ZSCAN10Q96SZ4 725 aaPredicted RBP10.89□□□□□ -0.67
PDE4D-222ENST00000514552 KIAA1107Q9UPP5 1409 aa10.89□□□□□ -0.67
PDE4D-222ENST00000514552 GPATCH8Q9UKJ3 1502 aaKnown RBP10.89□□□□□ -0.67
PDE4D-222ENST00000514552 MROH2AA6NES4 1674 aa10.89□□□□□ -0.67
PDE4D-222ENST00000514552 CDK2AP1O14519 115 aa10.88□□□□□ -0.67
PDE4D-222ENST00000514552 MAN1A2O60476 641 aa10.88□□□□□ -0.67
PDE4D-222ENST00000514552 CSB-PGBD3P0DP91 1061 aa10.88□□□□□ -0.67
PDE4D-222ENST00000514552 GTF2E1P29083 439 aaPredicted RBP10.88□□□□□ -0.67
PDE4D-222ENST00000514552 EPHA4P54764 986 aa10.88□□□□□ -0.67
PDE4D-222ENST00000514552 MLECQ14165 292 aa10.88□□□□□ -0.67
PDE4D-222ENST00000514552 LYSMD3Q7Z3D4 306 aa10.88□□□□□ -0.67
PDE4D-222ENST00000514552 PPARGC1BQ86YN6 1023 aaKnown RBP10.88□□□□□ -0.67
PDE4D-222ENST00000514552 TSEN2Q8NCE0 465 aaKnown RBP10.88□□□□□ -0.67
PDE4D-222ENST00000514552 STK32AQ8WU08 396 aa10.88□□□□□ -0.67
PDE4D-222ENST00000514552 DNMT3LQ9UJW3 386 aa10.88□□□□□ -0.67
PDE4D-222ENST00000514552 INO80Q9ULG1 1556 aaPredicted RBP10.88□□□□□ -0.67
PDE4D-222ENST00000514552 SETD1BQ9UPS6 1966 aaKnown RBP10.88□□□□□ -0.67
PDE4D-222ENST00000514552 SYCP2Q9BX26 1530 aa10.88□□□□□ -0.67
PDE4D-222ENST00000514552 PLXNC1O60486 1568 aa10.87□□□□□ -0.67
PDE4D-222ENST00000514552 SPATA31C2B4DYI2 1134 aa10.87□□□□□ -0.67
PDE4D-222ENST00000514552 C11orf95C9JLR9 678 aaPredicted RBP10.87□□□□□ -0.67
PDE4D-222ENST00000514552 HSPA2P54652 639 aa10.87□□□□□ -0.67
PDE4D-222ENST00000514552 SWI5Q1ZZU3 235 aa10.87□□□□□ -0.67
PDE4D-222ENST00000514552 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.87□□□□□ -0.67
PDE4D-222ENST00000514552 TNS4Q8IZW8 715 aa10.87□□□□□ -0.67
PDE4D-222ENST00000514552 SCHIP1Q9P0W5 487 aaPredicted RBP10.87□□□□□ -0.67
PDE4D-222ENST00000514552 C3P01024 1663 aa10.87□□□□□ -0.67
PDE4D-222ENST00000514552 ATP7AQ04656 1500 aa10.86□□□□□ -0.67
PDE4D-222ENST00000514552 EHBP1L1Q8N3D4 1523 aa10.86□□□□□ -0.67
PDE4D-222ENST00000514552 FIGNL2A6NMB9 653 aa10.86□□□□□ -0.67
PDE4D-222ENST00000514552 FOXK2Q01167 660 aa10.86□□□□□ -0.67
PDE4D-222ENST00000514552 TMEM164Q5U3C3 297 aa10.86□□□□□ -0.67
PDE4D-222ENST00000514552 TMEM214Q6NUQ4 689 aaKnown RBP10.86□□□□□ -0.67
PDE4D-222ENST00000514552 NBPF15Q8N660 670 aa10.86□□□□□ -0.67
PDE4D-222ENST00000514552 NPATQ14207 1427 aa10.85□□□□□ -0.67
PDE4D-222ENST00000514552 SNRPBP14678 240 aaKnown RBP10.85□□□□□ -0.67
PDE4D-222ENST00000514552 GNASQ5JWF2 1037 aa10.85□□□□□ -0.67
PDE4D-222ENST00000514552 HINFPQ9BQA5 517 aa10.85□□□□□ -0.67
PDE4D-222ENST00000514552 IQSEC3Q9UPP2 1182 aaPredicted RBP10.85□□□□□ -0.67
PDE4D-222ENST00000514552 POTECB2RU33 542 aa10.84□□□□□ -0.67
PDE4D-222ENST00000514552 WDR44Q5JSH3 913 aa10.84□□□□□ -0.67
PDE4D-222ENST00000514552 PRICKLE2Q7Z3G6 844 aa10.84□□□□□ -0.67
PDE4D-222ENST00000514552 RHBDD1Q8TEB9 315 aa10.84□□□□□ -0.67
PDE4D-222ENST00000514552 USTQ9Y2C2 406 aa10.84□□□□□ -0.67
PDE4D-222ENST00000514552 STRCQ7RTU9 1775 aa10.84□□□□□ -0.67
PDE4D-222ENST00000514552 PTPRTO14522 1441 aa10.84□□□□□ -0.67
PDE4D-222ENST00000514552 CCNB3Q8WWL7 1395 aa10.83□□□□□ -0.68
PDE4D-222ENST00000514552 SPAG9O60271 1321 aaKnown RBP10.83□□□□□ -0.68
PDE4D-222ENST00000514552 TIAM1Q13009 1591 aa10.82□□□□□ -0.68
PDE4D-222ENST00000514552 MTUS2Q5JR59 1369 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms