RNA–Protein interactions for RNA: ENST00000514497.6

SNCAIP-220, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-220ENST00000514497 TGFB2P61812 414 aa21.26■□□□□ 0.99
SNCAIP-220ENST00000514497 C9orf131Q5VYM1 1079 aa21.26■□□□□ 0.99
SNCAIP-220ENST00000514497 RBM42Q9BTD8 480 aaKnown RBP21.26■□□□□ 0.99
SNCAIP-220ENST00000514497 BRCA1P38398 1863 aaKnown RBP21.26■□□□□ 0.99
SNCAIP-220ENST00000514497 KIF16BQ96L93 1317 aa21.26■□□□□ 0.99
SNCAIP-220ENST00000514497 TJP1Q07157 1748 aa21.25■□□□□ 0.99
SNCAIP-220ENST00000514497 SSH1Q8WYL5 1049 aa21.25■□□□□ 0.99
SNCAIP-220ENST00000514497 DBF4Q9UBU7 674 aaPredicted RBP21.25■□□□□ 0.99
SNCAIP-220ENST00000514497 RNF123Q5XPI4 1314 aa21.25■□□□□ 0.99
SNCAIP-220ENST00000514497 MMP10P09238 476 aa21.24■□□□□ 0.99
SNCAIP-220ENST00000514497 SMC1BQ8NDV3 1235 aa21.24■□□□□ 0.99
SNCAIP-220ENST00000514497 RRAGCQ9HB90 399 aa21.24■□□□□ 0.99
SNCAIP-220ENST00000514497 SMC4Q9NTJ3 1288 aa21.24■□□□□ 0.99
SNCAIP-220ENST00000514497 ARFGEF1Q9Y6D6 1849 aa21.23■□□□□ 0.99
SNCAIP-220ENST00000514497 IPO8O15397 1037 aaKnown RBP21.23■□□□□ 0.99
SNCAIP-220ENST00000514497 ARHGAP45Q92619 1136 aa21.23■□□□□ 0.99
SNCAIP-220ENST00000514497 USP16Q9Y5T5 823 aa21.23■□□□□ 0.99
SNCAIP-220ENST00000514497 COL5A3P25940 1745 aaPredicted RBP21.23■□□□□ 0.99
SNCAIP-220ENST00000514497 C10orf71Q711Q0 1435 aa21.22■□□□□ 0.99
SNCAIP-220ENST00000514497 EIF2S2P20042 333 aaKnown RBP21.22■□□□□ 0.99
SNCAIP-220ENST00000514497 ATP6V1AP38606 617 aa21.22■□□□□ 0.99
SNCAIP-220ENST00000514497 MRPL50Q8N5N7 158 aaKnown RBP21.22■□□□□ 0.99
SNCAIP-220ENST00000514497 DDX21Q9NR30 783 aaKnown RBP eCLIP21.22■□□□□ 0.99
SNCAIP-220ENST00000514497 HYPKQ9NX55 129 aa21.22■□□□□ 0.99
SNCAIP-220ENST00000514497 SLC4A2P04920 1241 aa21.21■□□□□ 0.99
SNCAIP-220ENST00000514497 MS4A1P11836 297 aa21.21■□□□□ 0.99
SNCAIP-220ENST00000514497 BCAR3O75815 825 aa21.2■□□□□ 0.98
SNCAIP-220ENST00000514497 SLC4A9Q96Q91 983 aa21.2■□□□□ 0.98
SNCAIP-220ENST00000514497 PTPRCP08575 1304 aa21.2■□□□□ 0.98
SNCAIP-220ENST00000514497 PRAMEF22A3QJZ6 481 aa21.19■□□□□ 0.98
SNCAIP-220ENST00000514497 CYP19A1P11511 503 aaPredicted RBP21.19■□□□□ 0.98
SNCAIP-220ENST00000514497 DPEP1P16444 411 aa21.19■□□□□ 0.98
SNCAIP-220ENST00000514497 DNAJC10Q8IXB1 793 aa21.19■□□□□ 0.98
SNCAIP-220ENST00000514497 SUPT16HQ9Y5B9 1047 aaKnown RBP21.19■□□□□ 0.98
SNCAIP-220ENST00000514497 GNPATO15228 680 aa21.18■□□□□ 0.98
SNCAIP-220ENST00000514497 LINC00116Q8NCU8 138 aa21.18■□□□□ 0.98
SNCAIP-220ENST00000514497 RNF181Q9P0P0 153 aa21.18■□□□□ 0.98
SNCAIP-220ENST00000514497 RRP1P56182 461 aaKnown RBP21.17■□□□□ 0.98
SNCAIP-220ENST00000514497 RC3H1Q5TC82 1133 aaKnown RBP21.17■□□□□ 0.98
SNCAIP-220ENST00000514497 CHPF2Q9P2E5 772 aa21.17■□□□□ 0.98
SNCAIP-220ENST00000514497 SBF1O95248 1867 aa21.17■□□□□ 0.98
SNCAIP-220ENST00000514497 PDIA6Q15084 440 aa21.16■□□□□ 0.98
SNCAIP-220ENST00000514497 ZKSCAN2Q63HK3 967 aa21.16■□□□□ 0.98
SNCAIP-220ENST00000514497 BCL2L13Q9BXK5 485 aa21.16■□□□□ 0.98
SNCAIP-220ENST00000514497 CNTNAP4Q9C0A0 1308 aa21.15■□□□□ 0.98
SNCAIP-220ENST00000514497 PDE3AQ14432 1141 aa21.15■□□□□ 0.98
SNCAIP-220ENST00000514497 API5Q9BZZ5 524 aaKnown RBP21.15■□□□□ 0.98
SNCAIP-220ENST00000514497 CCDC87Q9NVE4 849 aa21.15■□□□□ 0.98
SNCAIP-220ENST00000514497 CANXP27824 592 aaKnown RBP21.14■□□□□ 0.97
SNCAIP-220ENST00000514497 ITPK1Q13572 414 aa21.14■□□□□ 0.97
SNCAIP-220ENST00000514497 ATF7IPQ6VMQ6 1270 aa21.14■□□□□ 0.97
SNCAIP-220ENST00000514497 NECTIN2Q92692 538 aa21.14■□□□□ 0.97
SNCAIP-220ENST00000514497 NOB1Q9ULX3 412 aaKnown RBP21.14■□□□□ 0.97
SNCAIP-220ENST00000514497 C4AP0C0L4 1744 aa21.14■□□□□ 0.97
SNCAIP-220ENST00000514497 DDX58O95786 925 aaKnown RBP21.13■□□□□ 0.97
SNCAIP-220ENST00000514497 A1BGP04217 495 aa21.13■□□□□ 0.97
SNCAIP-220ENST00000514497 IL6STP40189 918 aaPredicted RBP21.13■□□□□ 0.97
SNCAIP-220ENST00000514497 FLIIQ13045 1269 aa21.13■□□□□ 0.97
SNCAIP-220ENST00000514497 NLGN1Q8N2Q7 840 aa21.13■□□□□ 0.97
SNCAIP-220ENST00000514497 PCDH10Q9P2E7 1040 aa21.13■□□□□ 0.97
SNCAIP-220ENST00000514497 MYH14Q7Z406 1995 aaKnown RBP21.13■□□□□ 0.97
SNCAIP-220ENST00000514497 CRKLP46109 303 aaKnown RBP21.12■□□□□ 0.97
SNCAIP-220ENST00000514497 FRAT1Q92837 279 aaPredicted RBP21.12■□□□□ 0.97
SNCAIP-220ENST00000514497 NBPF26B4DH59 902 aa21.11■□□□□ 0.97
SNCAIP-220ENST00000514497 TCERG1O14776 1098 aaKnown RBP21.11■□□□□ 0.97
SNCAIP-220ENST00000514497 NBPF10Q6P3W6 841 aaKnown RBP21.11■□□□□ 0.97
SNCAIP-220ENST00000514497 LRP10Q7Z4F1 713 aa21.11■□□□□ 0.97
SNCAIP-220ENST00000514497 NPM2Q86SE8 214 aaKnown RBP21.11■□□□□ 0.97
SNCAIP-220ENST00000514497 NBPF15Q8N660 670 aa21.11■□□□□ 0.97
SNCAIP-220ENST00000514497 PIM2Q9P1W9 311 aa21.11■□□□□ 0.97
SNCAIP-220ENST00000514497 KCNA3P22001 575 aa21.1■□□□□ 0.97
SNCAIP-220ENST00000514497 INTS5Q6P9B9 1019 aaKnown RBP21.1■□□□□ 0.97
SNCAIP-220ENST00000514497 TRIM27P14373 513 aa21.09■□□□□ 0.97
SNCAIP-220ENST00000514497 MYL6BP14649 208 aa21.09■□□□□ 0.97
SNCAIP-220ENST00000514497 FKBP5Q13451 457 aaPredicted RBP21.09■□□□□ 0.97
SNCAIP-220ENST00000514497 RGL2O15211 777 aa21.08■□□□□ 0.97
SNCAIP-220ENST00000514497 NEFLP07196 543 aa21.08■□□□□ 0.97
SNCAIP-220ENST00000514497 EIF5P55010 431 aaKnown RBP21.08■□□□□ 0.97
SNCAIP-220ENST00000514497 PROSER3Q2NL68 480 aa21.08■□□□□ 0.97
SNCAIP-220ENST00000514497 DALRD3Q5D0E6 543 aaKnown RBP21.08■□□□□ 0.97
SNCAIP-220ENST00000514497 TRAPPC3LQ5T215 181 aa21.08■□□□□ 0.97
SNCAIP-220ENST00000514497 G2E3Q7L622 706 aa21.08■□□□□ 0.97
SNCAIP-220ENST00000514497 DZIP1LQ8IYY4 767 aaKnown RBP21.08■□□□□ 0.97
SNCAIP-220ENST00000514497 PHAXQ9H814 394 aaKnown RBP21.08■□□□□ 0.97
SNCAIP-220ENST00000514497 ZBTB1Q9Y2K1 713 aa21.08■□□□□ 0.97
SNCAIP-220ENST00000514497 PARP3Q9Y6F1 533 aa21.08■□□□□ 0.97
SNCAIP-220ENST00000514497 A0A087WZG4 1122 aa21.07■□□□□ 0.96
SNCAIP-220ENST00000514497 RPS6KA4O75676 772 aa21.07■□□□□ 0.96
SNCAIP-220ENST00000514497 VEGFAP15692 232 aaPredicted RBP21.07■□□□□ 0.96
SNCAIP-220ENST00000514497 KSR2Q6VAB6 950 aa21.07■□□□□ 0.96
SNCAIP-220ENST00000514497 COPS6Q7L5N1 327 aa21.07■□□□□ 0.96
SNCAIP-220ENST00000514497 FTSJ3Q8IY81 847 aaKnown RBP21.07■□□□□ 0.96
SNCAIP-220ENST00000514497 PLIN1O60240 522 aa21.06■□□□□ 0.96
SNCAIP-220ENST00000514497 ANKRD13DQ6ZTN6 518 aa21.06■□□□□ 0.96
SNCAIP-220ENST00000514497 PLBD2Q8NHP8 589 aa21.06■□□□□ 0.96
SNCAIP-220ENST00000514497 XAGE3Q8WTP9 111 aa21.06■□□□□ 0.96
SNCAIP-220ENST00000514497 RTCBQ9Y3I0 505 aaKnown RBP21.06■□□□□ 0.96
SNCAIP-220ENST00000514497 ABCC4O15439 1325 aa21.05■□□□□ 0.96
SNCAIP-220ENST00000514497 ANXA1P04083 346 aa21.05■□□□□ 0.96
SNCAIP-220ENST00000514497 ADRA2BP18089 450 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms