RNA–Protein interactions for RNA: ENST00000513841.1

ARHGEF28-213, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 3

Gene ARHGEF28, Length 710 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-213ENST00000513841 CHD4Q14839 1912 aa15.09■□□□□ 0.01
ARHGEF28-213ENST00000513841 CARMIL3Q8ND23 1372 aa15.09■□□□□ 0.01
ARHGEF28-213ENST00000513841 FAM177BA6PVY3 158 aa15.08■□□□□ 0
ARHGEF28-213ENST00000513841 GTF2E1P29083 439 aaPredicted RBP15.08■□□□□ 0
ARHGEF28-213ENST00000513841 ST5P78524 1137 aa15.08■□□□□ 0
ARHGEF28-213ENST00000513841 CALD1Q05682 793 aaKnown RBP15.08■□□□□ 0
ARHGEF28-213ENST00000513841 NECTIN2Q92692 538 aa15.08■□□□□ 0
ARHGEF28-213ENST00000513841 ZNF622Q969S3 477 aaKnown RBP eCLIP15.08■□□□□ 0
ARHGEF28-213ENST00000513841 ERBB4Q15303 1308 aa15.08■□□□□ 0
ARHGEF28-213ENST00000513841 PDIA6Q15084 440 aa15.07■□□□□ 0
ARHGEF28-213ENST00000513841 KRT24Q2M2I5 525 aa15.07■□□□□ 0
ARHGEF28-213ENST00000513841 MAP3K15Q6ZN16 1313 aa15.07■□□□□ 0
ARHGEF28-213ENST00000513841 ANXA1P04083 346 aa15.06■□□□□ 0
ARHGEF28-213ENST00000513841 GNAI1P63096 354 aa15.06■□□□□ 0
ARHGEF28-213ENST00000513841 ZBTB3Q9H5J0 574 aa15.06■□□□□ 0
ARHGEF28-213ENST00000513841 N4BP2Q86UW6 1770 aaPredicted RBP15.06■□□□□ 0
ARHGEF28-213ENST00000513841 SENP3-EIF4A1A0A087X0R7 540 aa15.05■□□□□ -0
ARHGEF28-213ENST00000513841 ZNF853P0CG23 659 aa15.05■□□□□ -0
ARHGEF28-213ENST00000513841 COPS6Q7L5N1 327 aa15.05■□□□□ -0
ARHGEF28-213ENST00000513841 MBIPQ9NS73 344 aa15.05■□□□□ -0
ARHGEF28-213ENST00000513841 KIF13BQ9NQT8 1826 aa15.05■□□□□ -0
ARHGEF28-213ENST00000513841 GPTP24298 496 aa15.04■□□□□ -0
ARHGEF28-213ENST00000513841 AIMP1Q12904 312 aaKnown RBP15.04■□□□□ -0
ARHGEF28-213ENST00000513841 PROSER3Q2NL68 480 aa15.04■□□□□ -0
ARHGEF28-213ENST00000513841 DUSP27Q5VZP5 1158 aa15.04■□□□□ -0
ARHGEF28-213ENST00000513841 DDX21Q9NR30 783 aaKnown RBP eCLIP15.04■□□□□ -0
ARHGEF28-213ENST00000513841 IFT57Q9NWB7 429 aa15.04■□□□□ -0
ARHGEF28-213ENST00000513841 ELL2O00472 640 aaPredicted RBP15.03■□□□□ -0
ARHGEF28-213ENST00000513841 C9orf131Q5VYM1 1079 aa15.03■□□□□ -0
ARHGEF28-213ENST00000513841 GIGYF2Q6Y7W6 1299 aaKnown RBP15.03■□□□□ -0
ARHGEF28-213ENST00000513841 ZNF526Q8TF50 670 aaPredicted RBP15.03■□□□□ -0
ARHGEF28-213ENST00000513841 CNKSR1Q969H4 720 aa15.03■□□□□ -0
ARHGEF28-213ENST00000513841 MASTLQ96GX5 879 aa15.03■□□□□ -0
ARHGEF28-213ENST00000513841 NYXQ9GZU5 481 aa15.03■□□□□ -0
ARHGEF28-213ENST00000513841 GPBP1L1Q9HC44 474 aaPredicted RBP15.03■□□□□ -0
ARHGEF28-213ENST00000513841 ZNF219Q9P2Y4 722 aaPredicted RBP15.03■□□□□ -0
ARHGEF28-213ENST00000513841 HOXB7P09629 217 aa15.02■□□□□ -0
ARHGEF28-213ENST00000513841 SRGNP10124 158 aa15.02■□□□□ -0
ARHGEF28-213ENST00000513841 HDGFL1Q5TGJ6 251 aa15.02■□□□□ -0
ARHGEF28-213ENST00000513841 SUSD4Q5VX71 490 aa15.02■□□□□ -0
ARHGEF28-213ENST00000513841 STYK1Q6J9G0 422 aa15.02■□□□□ -0
ARHGEF28-213ENST00000513841 LRP10Q7Z4F1 713 aa15.02■□□□□ -0
ARHGEF28-213ENST00000513841 ZNF34Q8IZ26 560 aa15.02■□□□□ -0
ARHGEF28-213ENST00000513841 XAGE3Q8WTP9 111 aa15.02■□□□□ -0
ARHGEF28-213ENST00000513841 DBF4Q9UBU7 674 aaPredicted RBP15.02■□□□□ -0
ARHGEF28-213ENST00000513841 KDM3BQ7LBC6 1761 aa15.02□□□□□ -0.01
ARHGEF28-213ENST00000513841 KLRG2A4D1S0 409 aaPredicted RBP15.01□□□□□ -0.01
ARHGEF28-213ENST00000513841 WWC1Q8IX03 1113 aa15.01□□□□□ -0.01
ARHGEF28-213ENST00000513841 FAM9BQ8IZU0 186 aa15.01□□□□□ -0.01
ARHGEF28-213ENST00000513841 CHPF2Q9P2E5 772 aa15.01□□□□□ -0.01
ARHGEF28-213ENST00000513841 GOLGB1Q14789 3259 aaKnown RBP15.01□□□□□ -0.01
ARHGEF28-213ENST00000513841 AFDNP55196 1824 aaKnown RBP15.01□□□□□ -0.01
ARHGEF28-213ENST00000513841 C21orf2O43822 256 aa15□□□□□ -0.01
ARHGEF28-213ENST00000513841 NPR1P16066 1061 aa15□□□□□ -0.01
ARHGEF28-213ENST00000513841 CCDC27Q2M243 656 aa15□□□□□ -0.01
ARHGEF28-213ENST00000513841 ANKRD13DQ6ZTN6 518 aa15□□□□□ -0.01
ARHGEF28-213ENST00000513841 PPP1R42Q7Z4L9 355 aa15□□□□□ -0.01
ARHGEF28-213ENST00000513841 NUTM1Q86Y26 1132 aa15□□□□□ -0.01
ARHGEF28-213ENST00000513841 CHMP4AQ9BY43 222 aa15□□□□□ -0.01
ARHGEF28-213ENST00000513841 HYPKQ9NX55 129 aa15□□□□□ -0.01
ARHGEF28-213ENST00000513841 SALL2Q9Y467 1007 aaPredicted RBP15□□□□□ -0.01
ARHGEF28-213ENST00000513841 KIAA1551Q9HCM1 1747 aa15□□□□□ -0.01
ARHGEF28-213ENST00000513841 ATP10DQ9P241 1426 aa15□□□□□ -0.01
ARHGEF28-213ENST00000513841 ERFEQ4G0M1 354 aa14.99□□□□□ -0.01
ARHGEF28-213ENST00000513841 NCBP3Q53F19 620 aaKnown RBP14.99□□□□□ -0.01
ARHGEF28-213ENST00000513841 PARP10Q53GL7 1025 aa14.99□□□□□ -0.01
ARHGEF28-213ENST00000513841 HSP90AB3PQ58FF7 597 aa14.99□□□□□ -0.01
ARHGEF28-213ENST00000513841 C8orf58Q8NAV2 365 aa14.99□□□□□ -0.01
ARHGEF28-213ENST00000513841 RNF181Q9P0P0 153 aa14.99□□□□□ -0.01
ARHGEF28-213ENST00000513841 NRXN2Q9P2S2 1712 aa14.99□□□□□ -0.01
ARHGEF28-213ENST00000513841 ALDH1B1P30837 517 aa14.98□□□□□ -0.01
ARHGEF28-213ENST00000513841 C1QTNF8P60827 252 aa14.98□□□□□ -0.01
ARHGEF28-213ENST00000513841 TCIRG1Q13488 830 aa14.98□□□□□ -0.01
ARHGEF28-213ENST00000513841 UTP14AQ9BVJ6 771 aaKnown RBP14.98□□□□□ -0.01
ARHGEF28-213ENST00000513841 PRPF40BQ6NWY9 871 aaKnown RBP14.97□□□□□ -0.01
ARHGEF28-213ENST00000513841 PLBD2Q8NHP8 589 aa14.97□□□□□ -0.01
ARHGEF28-213ENST00000513841 UBN2Q6ZU65 1347 aa14.96□□□□□ -0.01
ARHGEF28-213ENST00000513841 LMNB1P20700 586 aa14.96□□□□□ -0.01
ARHGEF28-213ENST00000513841 RASSF7Q02833 373 aa14.96□□□□□ -0.01
ARHGEF28-213ENST00000513841 SLC10A5Q5PT55 438 aa14.96□□□□□ -0.01
ARHGEF28-213ENST00000513841 SOGA3Q5TF21 947 aa14.96□□□□□ -0.01
ARHGEF28-213ENST00000513841 NLRP3Q96P20 1036 aa14.96□□□□□ -0.01
ARHGEF28-213ENST00000513841 SCN7AQ01118 1682 aa14.96□□□□□ -0.01
ARHGEF28-213ENST00000513841 ADCY9O60503 1353 aa14.96□□□□□ -0.02
ARHGEF28-213ENST00000513841 CCDC30Q5VVM6 783 aa14.95□□□□□ -0.02
ARHGEF28-213ENST00000513841 NLRP10Q86W26 655 aa14.95□□□□□ -0.02
ARHGEF28-213ENST00000513841 WDR63Q8IWG1 891 aa14.95□□□□□ -0.02
ARHGEF28-213ENST00000513841 TSPYL6Q8N831 410 aa14.95□□□□□ -0.02
ARHGEF28-213ENST00000513841 C7orf43Q8WVR3 580 aa14.95□□□□□ -0.02
ARHGEF28-213ENST00000513841 TSR2Q969E8 191 aaKnown RBP14.95□□□□□ -0.02
ARHGEF28-213ENST00000513841 TRMT112Q9UI30 125 aaKnown RBP14.95□□□□□ -0.02
ARHGEF28-213ENST00000513841 NFKBIEO00221 500 aa14.94□□□□□ -0.02
ARHGEF28-213ENST00000513841 NTSR2O95665 410 aa14.94□□□□□ -0.02
ARHGEF28-213ENST00000513841 RIC3Q7Z5B4 369 aa14.94□□□□□ -0.02
ARHGEF28-213ENST00000513841 RPGRQ92834 1020 aaKnown RBP14.94□□□□□ -0.02
ARHGEF28-213ENST00000513841 RBM17Q96I25 401 aaKnown RBP14.94□□□□□ -0.02
ARHGEF28-213ENST00000513841 PHAXQ9H814 394 aaKnown RBP14.94□□□□□ -0.02
ARHGEF28-213ENST00000513841 IL16Q14005 1332 aa14.93□□□□□ -0.02
ARHGEF28-213ENST00000513841 LAMB4A4D0S4 1761 aa14.93□□□□□ -0.02
ARHGEF28-213ENST00000513841 ATP5J2-PTCD1G3V325 749 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms