RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 CCDC125Q86Z20 511 aa12.55□□□□□ -0.4
TPM3-221ENST00000513769 SLC52A2Q9HAB3 445 aa12.55□□□□□ -0.4
TPM3-221ENST00000513769 GPHNQ9NQX3 736 aaPredicted RBP12.55□□□□□ -0.4
TPM3-221ENST00000513769 RGPD2P0DJD1 1756 aa12.55□□□□□ -0.4
TPM3-221ENST00000513769 COL14A1Q05707 1796 aaKnown RBP12.54□□□□□ -0.4
TPM3-221ENST00000513769 EXOC5O00471 708 aa12.54□□□□□ -0.4
TPM3-221ENST00000513769 CYP27B1O15528 508 aa12.54□□□□□ -0.4
TPM3-221ENST00000513769 FOXK1P85037 733 aa12.54□□□□□ -0.4
TPM3-221ENST00000513769 B4GALNT3Q6L9W6 998 aa12.54□□□□□ -0.4
TPM3-221ENST00000513769 STRN4Q9NRL3 753 aa12.54□□□□□ -0.4
TPM3-221ENST00000513769 HEG1Q9ULI3 1381 aa12.54□□□□□ -0.4
TPM3-221ENST00000513769 INTS3Q68E01 1043 aaKnown RBP12.53□□□□□ -0.4
TPM3-221ENST00000513769 NFATC2IPQ8NCF5 419 aa12.53□□□□□ -0.4
TPM3-221ENST00000513769 CLUAP1Q96AJ1 413 aa12.53□□□□□ -0.4
TPM3-221ENST00000513769 BCL2L13Q9BXK5 485 aa12.53□□□□□ -0.4
TPM3-221ENST00000513769 COG6Q9Y2V7 657 aa12.53□□□□□ -0.4
TPM3-221ENST00000513769 ATRNO75882 1429 aa12.53□□□□□ -0.4
TPM3-221ENST00000513769 CABP4P57796 275 aa12.52□□□□□ -0.41
TPM3-221ENST00000513769 ZNF790Q6PG37 636 aa12.52□□□□□ -0.41
TPM3-221ENST00000513769 BARGINQ6ZT62 677 aa12.52□□□□□ -0.41
TPM3-221ENST00000513769 CENPQQ7L2Z9 268 aaPredicted RBP12.52□□□□□ -0.41
TPM3-221ENST00000513769 PLPP6Q8IY26 295 aa12.52□□□□□ -0.41
TPM3-221ENST00000513769 PANK1Q8TE04 598 aa12.52□□□□□ -0.41
TPM3-221ENST00000513769 GJD4Q96KN9 370 aaPredicted RBP12.52□□□□□ -0.41
TPM3-221ENST00000513769 CACNA1FO60840 1977 aa12.51□□□□□ -0.41
TPM3-221ENST00000513769 ZBTB7BO15156 539 aaPredicted RBP12.51□□□□□ -0.41
TPM3-221ENST00000513769 GIGYF1O75420 1035 aaPredicted RBP12.51□□□□□ -0.41
TPM3-221ENST00000513769 DSG2Q14126 1118 aa12.51□□□□□ -0.41
TPM3-221ENST00000513769 RWDD1Q9H446 243 aaPredicted RBP12.51□□□□□ -0.41
TPM3-221ENST00000513769 ADAMTS7Q9UKP4 1686 aa12.51□□□□□ -0.41
TPM3-221ENST00000513769 ABCA3Q99758 1704 aa12.51□□□□□ -0.41
TPM3-221ENST00000513769 RLBP1P12271 317 aa12.5□□□□□ -0.41
TPM3-221ENST00000513769 ZBTB40Q9NUA8 1239 aa12.5□□□□□ -0.41
TPM3-221ENST00000513769 DBF4Q9UBU7 674 aaPredicted RBP12.5□□□□□ -0.41
TPM3-221ENST00000513769 LRRC37A3O60309 1634 aa12.5□□□□□ -0.41
TPM3-221ENST00000513769 MEGF6O75095 1541 aa12.49□□□□□ -0.41
TPM3-221ENST00000513769 BCL9LQ86UU0 1499 aa12.49□□□□□ -0.41
TPM3-221ENST00000513769 GTPBP6O43824 516 aaPredicted RBP12.49□□□□□ -0.41
TPM3-221ENST00000513769 SNRPA1P09661 255 aaKnown RBP12.49□□□□□ -0.41
TPM3-221ENST00000513769 CCT4P50991 539 aaKnown RBP12.49□□□□□ -0.41
TPM3-221ENST00000513769 UNC5CLQ8IV45 518 aa12.49□□□□□ -0.41
TPM3-221ENST00000513769 TEX13AQ9BXU3 409 aaPredicted RBP12.49□□□□□ -0.41
TPM3-221ENST00000513769 ABCC4O15439 1325 aa12.48□□□□□ -0.41
TPM3-221ENST00000513769 SPATA31A1Q5TZJ5 1347 aa12.48□□□□□ -0.41
TPM3-221ENST00000513769 KRT24Q2M2I5 525 aa12.48□□□□□ -0.41
TPM3-221ENST00000513769 HDGFL1Q5TGJ6 251 aa12.48□□□□□ -0.41
TPM3-221ENST00000513769 TTC5Q8N0Z6 440 aa12.48□□□□□ -0.41
TPM3-221ENST00000513769 TMEM57Q8N5G2 664 aa12.48□□□□□ -0.41
TPM3-221ENST00000513769 FMNL2Q96PY5 1086 aa12.48□□□□□ -0.41
TPM3-221ENST00000513769 HYPKQ9NX55 129 aa12.48□□□□□ -0.41
TPM3-221ENST00000513769 LHX6Q9UPM6 363 aa12.48□□□□□ -0.41
TPM3-221ENST00000513769 SPATA31A5Q5VU36 1347 aa12.47□□□□□ -0.41
TPM3-221ENST00000513769 SPATA31A7Q8IWB4 1347 aa12.47□□□□□ -0.41
TPM3-221ENST00000513769 SF3B2Q13435 895 aaKnown RBP12.47□□□□□ -0.41
TPM3-221ENST00000513769 HDAC1Q13547 482 aaPredicted RBP12.47□□□□□ -0.41
TPM3-221ENST00000513769 VPS72Q15906 364 aa12.47□□□□□ -0.41
TPM3-221ENST00000513769 ITPRIPQ8IWB1 547 aa12.47□□□□□ -0.41
TPM3-221ENST00000513769 DDX54Q8TDD1 881 aaKnown RBP12.47□□□□□ -0.41
TPM3-221ENST00000513769 HDAC5Q9UQL6 1122 aa12.47□□□□□ -0.41
TPM3-221ENST00000513769 PKD1L3Q7Z443 1732 aa12.47□□□□□ -0.41
TPM3-221ENST00000513769 SRCAPQ6ZRS2 3230 aa12.47□□□□□ -0.41
TPM3-221ENST00000513769 PARP4Q9UKK3 1724 aaKnown RBP12.46□□□□□ -0.41
TPM3-221ENST00000513769 FLIIQ13045 1269 aa12.46□□□□□ -0.41
TPM3-221ENST00000513769 VSIG10Q8N0Z9 540 aa12.46□□□□□ -0.41
TPM3-221ENST00000513769 PTCD2Q8WV60 388 aaKnown RBP12.46□□□□□ -0.41
TPM3-221ENST00000513769 DDX21Q9NR30 783 aaKnown RBP eCLIP12.46□□□□□ -0.41
TPM3-221ENST00000513769 SLIT2O94813 1529 aa12.46□□□□□ -0.42
TPM3-221ENST00000513769 SCN11AQ9UI33 1791 aa12.46□□□□□ -0.42
TPM3-221ENST00000513769 ERBB4Q15303 1308 aa12.45□□□□□ -0.42
TPM3-221ENST00000513769 KDM2BQ8NHM5 1336 aa12.45□□□□□ -0.42
TPM3-221ENST00000513769 KCNQ3O43525 872 aa12.45□□□□□ -0.42
TPM3-221ENST00000513769 RPAP2Q8IXW5 612 aaPredicted RBP12.45□□□□□ -0.42
TPM3-221ENST00000513769 USP35Q9P2H5 1018 aa12.45□□□□□ -0.42
TPM3-221ENST00000513769 DISP2A7MBM2 1401 aa12.45□□□□□ -0.42
TPM3-221ENST00000513769 KDM6AO15550 1401 aaPredicted RBP12.45□□□□□ -0.42
TPM3-221ENST00000513769 TCERG1O14776 1098 aaKnown RBP12.44□□□□□ -0.42
TPM3-221ENST00000513769 DDX58O95786 925 aaKnown RBP12.44□□□□□ -0.42
TPM3-221ENST00000513769 EIF2S2P20042 333 aaKnown RBP12.44□□□□□ -0.42
TPM3-221ENST00000513769 DDB1Q16531 1140 aa12.44□□□□□ -0.42
TPM3-221ENST00000513769 CRISPLD2Q9H0B8 497 aa12.44□□□□□ -0.42
TPM3-221ENST00000513769 CCDC9Q9Y3X0 531 aaKnown RBP12.44□□□□□ -0.42
TPM3-221ENST00000513769 IBTKQ9P2D0 1353 aaPredicted RBP12.43□□□□□ -0.42
TPM3-221ENST00000513769 NWD2Q9ULI1 1742 aa12.43□□□□□ -0.42
TPM3-221ENST00000513769 MRC1P22897 1456 aa12.43□□□□□ -0.42
TPM3-221ENST00000513769 DEFB132Q7Z7B7 95 aa12.43□□□□□ -0.42
TPM3-221ENST00000513769 SEPT12Q8IYM1 358 aa12.43□□□□□ -0.42
TPM3-221ENST00000513769 PCDHB15Q9Y5E8 787 aa12.43□□□□□ -0.42
TPM3-221ENST00000513769 KDM3BQ7LBC6 1761 aa12.43□□□□□ -0.42
TPM3-221ENST00000513769 ONECUT3O60422 494 aaPredicted RBP12.42□□□□□ -0.42
TPM3-221ENST00000513769 GNAI3P08754 354 aa12.42□□□□□ -0.42
TPM3-221ENST00000513769 FKBP5Q13451 457 aaPredicted RBP12.42□□□□□ -0.42
TPM3-221ENST00000513769 ZNF496Q96IT1 587 aaPredicted RBP12.42□□□□□ -0.42
TPM3-221ENST00000513769 TMOD3Q9NYL9 352 aa12.42□□□□□ -0.42
TPM3-221ENST00000513769 TNNQ9UQP3 1299 aa12.42□□□□□ -0.42
TPM3-221ENST00000513769 SIPA1L3O60292 1781 aaPredicted RBP12.42□□□□□ -0.42
TPM3-221ENST00000513769 IGHDP01880 384 aa12.41□□□□□ -0.42
TPM3-221ENST00000513769 SLC39A6Q13433 755 aa12.41□□□□□ -0.42
TPM3-221ENST00000513769 KSR2Q6VAB6 950 aa12.41□□□□□ -0.42
TPM3-221ENST00000513769 G2E3Q7L622 706 aa12.41□□□□□ -0.42
TPM3-221ENST00000513769 GCC1Q96CN9 775 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms