RNA–Protein interactions for RNA: ENST00000513725.1

SFXN1-210, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-210ENST00000513725 COL11A2P13942 1736 aaPredicted RBP16.67■□□□□ 0.26
SFXN1-210ENST00000513725 TJP1Q07157 1748 aa16.67■□□□□ 0.26
SFXN1-210ENST00000513725 COL15A1P39059 1388 aa16.66■□□□□ 0.26
SFXN1-210ENST00000513725 USP50Q70EL3 339 aaPredicted RBP16.66■□□□□ 0.26
SFXN1-210ENST00000513725 GGNBP2Q9H3C7 697 aa16.66■□□□□ 0.26
SFXN1-210ENST00000513725 CACNA1SQ13698 1873 aa16.65■□□□□ 0.26
SFXN1-210ENST00000513725 PKN2Q16513 984 aaKnown RBP16.65■□□□□ 0.26
SFXN1-210ENST00000513725 FYB1O15117 783 aa16.64■□□□□ 0.25
SFXN1-210ENST00000513725 MASTLQ96GX5 879 aa16.64■□□□□ 0.25
SFXN1-210ENST00000513725 GJA3Q9Y6H8 435 aa16.64■□□□□ 0.25
SFXN1-210ENST00000513725 SRGNP10124 158 aa16.63■□□□□ 0.25
SFXN1-210ENST00000513725 PRR5LQ6MZQ0 368 aa16.63■□□□□ 0.25
SFXN1-210ENST00000513725 ZIC5Q96T25 663 aa16.63■□□□□ 0.25
SFXN1-210ENST00000513725 EYA1Q99502 592 aa16.63■□□□□ 0.25
SFXN1-210ENST00000513725 ARFGEF2Q9Y6D5 1785 aa16.63■□□□□ 0.25
SFXN1-210ENST00000513725 CUL9Q8IWT3 2517 aa16.62■□□□□ 0.25
SFXN1-210ENST00000513725 IARSP41252 1262 aaKnown RBP16.62■□□□□ 0.25
SFXN1-210ENST00000513725 EIF6P56537 245 aaKnown RBP16.62■□□□□ 0.25
SFXN1-210ENST00000513725 CCDC24Q8N4L8 307 aa16.62■□□□□ 0.25
SFXN1-210ENST00000513725 JDP2Q8WYK2 163 aa16.62■□□□□ 0.25
SFXN1-210ENST00000513725 NPHP1O15259 732 aa16.61■□□□□ 0.25
SFXN1-210ENST00000513725 TRPA1O75762 1119 aa16.61■□□□□ 0.25
SFXN1-210ENST00000513725 EPS15P42566 896 aa16.61■□□□□ 0.25
SFXN1-210ENST00000513725 DNAJC10Q8IXB1 793 aa16.61■□□□□ 0.25
SFXN1-210ENST00000513725 RTKN2Q8IZC4 609 aa16.61■□□□□ 0.25
SFXN1-210ENST00000513725 C7orf43Q8WVR3 580 aa16.61■□□□□ 0.25
SFXN1-210ENST00000513725 ZNF408Q9H9D4 720 aa16.6■□□□□ 0.25
SFXN1-210ENST00000513725 RNF186Q9NXI6 227 aa16.6■□□□□ 0.25
SFXN1-210ENST00000513725 A0A0C4DFX4 3053 aa16.6■□□□□ 0.25
SFXN1-210ENST00000513725 PPM1GO15355 546 aaPredicted RBP16.59■□□□□ 0.25
SFXN1-210ENST00000513725 CYP19A1P11511 503 aaPredicted RBP16.59■□□□□ 0.25
SFXN1-210ENST00000513725 SCNN1DP51172 638 aa16.59■□□□□ 0.25
SFXN1-210ENST00000513725 NFATC2IPQ8NCF5 419 aa16.59■□□□□ 0.25
SFXN1-210ENST00000513725 L3MBTL2Q969R5 705 aa16.59■□□□□ 0.25
SFXN1-210ENST00000513725 EMILIN1Q9Y6C2 1016 aa16.59■□□□□ 0.25
SFXN1-210ENST00000513725 SZT2Q5T011 3432 aa16.58■□□□□ 0.25
SFXN1-210ENST00000513725 ST20-MTHFSA0A0A6YYL1 179 aa16.58■□□□□ 0.24
SFXN1-210ENST00000513725 MTHFSP49914 203 aa16.58■□□□□ 0.24
SFXN1-210ENST00000513725 ST5P78524 1137 aa16.58■□□□□ 0.24
SFXN1-210ENST00000513725 TBC1D9BQ66K14 1250 aa16.58■□□□□ 0.24
SFXN1-210ENST00000513725 CNBD1Q8NA66 436 aa16.58■□□□□ 0.24
SFXN1-210ENST00000513725 ZBTB1Q9Y2K1 713 aa16.58■□□□□ 0.24
SFXN1-210ENST00000513725 HUNKP57058 714 aa16.57■□□□□ 0.24
SFXN1-210ENST00000513725 SYNE4Q8N205 404 aa16.57■□□□□ 0.24
SFXN1-210ENST00000513725 PLEKHO1Q53GL0 409 aaPredicted RBP16.56■□□□□ 0.24
SFXN1-210ENST00000513725 GLIS2Q9BZE0 524 aaPredicted RBP16.56■□□□□ 0.24
SFXN1-210ENST00000513725 ADARB2Q9NS39 739 aaKnown RBP16.56■□□□□ 0.24
SFXN1-210ENST00000513725 HDAC9Q9UKV0 1011 aa16.56■□□□□ 0.24
SFXN1-210ENST00000513725 AKAP11Q9UKA4 1901 aa16.56■□□□□ 0.24
SFXN1-210ENST00000513725 MKI67P46013 3256 aaKnown RBP16.56■□□□□ 0.24
SFXN1-210ENST00000513725 WASHC2AQ641Q2 1341 aa16.55■□□□□ 0.24
SFXN1-210ENST00000513725 A0A087WZG4 1122 aa16.55■□□□□ 0.24
SFXN1-210ENST00000513725 KIF23Q02241 960 aaPredicted RBP16.55■□□□□ 0.24
SFXN1-210ENST00000513725 CCDC102AQ96A19 550 aa16.55■□□□□ 0.24
SFXN1-210ENST00000513725 COLQQ9Y215 455 aaPredicted RBP16.55■□□□□ 0.24
SFXN1-210ENST00000513725 BCORQ6W2J9 1755 aa16.55■□□□□ 0.24
SFXN1-210ENST00000513725 ANKRD26Q9UPS8 1709 aa16.55■□□□□ 0.24
SFXN1-210ENST00000513725 RGMBQ6NW40 437 aa16.54■□□□□ 0.24
SFXN1-210ENST00000513725 ZNF530Q6P9A1 599 aaPredicted RBP16.54■□□□□ 0.24
SFXN1-210ENST00000513725 PITPNM2Q9BZ72 1349 aa16.53■□□□□ 0.24
SFXN1-210ENST00000513725 FAM155AB1AL88 458 aaPredicted RBP16.53■□□□□ 0.24
SFXN1-210ENST00000513725 NPR1P16066 1061 aa16.53■□□□□ 0.24
SFXN1-210ENST00000513725 SETDB2Q96T68 719 aa16.53■□□□□ 0.24
SFXN1-210ENST00000513725 CANXP27824 592 aaKnown RBP16.52■□□□□ 0.24
SFXN1-210ENST00000513725 C1orf141Q5JVX7 400 aa16.52■□□□□ 0.24
SFXN1-210ENST00000513725 AMOTQ4VCS5 1084 aa16.51■□□□□ 0.23
SFXN1-210ENST00000513725 FBXO46Q6PJ61 603 aaPredicted RBP16.51■□□□□ 0.23
SFXN1-210ENST00000513725 OLFM4Q6UX06 510 aa16.51■□□□□ 0.23
SFXN1-210ENST00000513725 CDC37L1Q7L3B6 337 aa16.51■□□□□ 0.23
SFXN1-210ENST00000513725 PSMD1Q99460 953 aa16.51■□□□□ 0.23
SFXN1-210ENST00000513725 SCN11AQ9UI33 1791 aa16.51■□□□□ 0.23
SFXN1-210ENST00000513725 MNX1P50219 401 aaPredicted RBP16.5■□□□□ 0.23
SFXN1-210ENST00000513725 CARD11Q9BXL7 1154 aa16.5■□□□□ 0.23
SFXN1-210ENST00000513725 GPRC5DQ9NZD1 345 aa16.5■□□□□ 0.23
SFXN1-210ENST00000513725 PGAP2Q9UHJ9 254 aa16.5■□□□□ 0.23
SFXN1-210ENST00000513725 ZNF157P51786 506 aaPredicted RBP16.49■□□□□ 0.23
SFXN1-210ENST00000513725 REM2Q8IYK8 340 aaPredicted RBP16.49■□□□□ 0.23
SFXN1-210ENST00000513725 ZC3H15Q8WU90 426 aaKnown RBP16.49■□□□□ 0.23
SFXN1-210ENST00000513725 KIF20BQ96Q89 1820 aa16.49■□□□□ 0.23
SFXN1-210ENST00000513725 EIF5P55010 431 aaKnown RBP16.48■□□□□ 0.23
SFXN1-210ENST00000513725 CSRNP1Q96S65 589 aa16.48■□□□□ 0.23
SFXN1-210ENST00000513725 TRIOBPQ9H2D6 2365 aa16.47■□□□□ 0.23
SFXN1-210ENST00000513725 ALDH1B1P30837 517 aa16.47■□□□□ 0.23
SFXN1-210ENST00000513725 LARGE2Q8N3Y3 721 aa16.47■□□□□ 0.23
SFXN1-210ENST00000513725 C2orf69Q8N8R5 385 aa16.46■□□□□ 0.23
SFXN1-210ENST00000513725 ZNF296Q8WUU4 475 aaPredicted RBP16.46■□□□□ 0.23
SFXN1-210ENST00000513725 SCN7AQ01118 1682 aa16.46■□□□□ 0.23
SFXN1-210ENST00000513725 STARD3NLO95772 234 aa16.45■□□□□ 0.22
SFXN1-210ENST00000513725 EIF4A2Q14240 407 aaKnown RBP16.45■□□□□ 0.22
SFXN1-210ENST00000513725 INTS3Q68E01 1043 aaKnown RBP16.45■□□□□ 0.22
SFXN1-210ENST00000513725 VSIG10Q8N0Z9 540 aa16.45■□□□□ 0.22
SFXN1-210ENST00000513725 TBC1D2BQ9UPU7 963 aa16.45■□□□□ 0.22
SFXN1-210ENST00000513725 COL4A5P29400 1685 aa16.44■□□□□ 0.22
SFXN1-210ENST00000513725 GBA2Q9HCG7 927 aaPredicted RBP16.44■□□□□ 0.22
SFXN1-210ENST00000513725 COL6A3P12111 3177 aa16.44■□□□□ 0.22
SFXN1-210ENST00000513725 KLRG2A4D1S0 409 aaPredicted RBP16.43■□□□□ 0.22
SFXN1-210ENST00000513725 POTEFA5A3E0 1075 aa16.43■□□□□ 0.22
SFXN1-210ENST00000513725 SLC24A1O60721 1099 aa16.43■□□□□ 0.22
SFXN1-210ENST00000513725 SLC10A3P09131 477 aa16.43■□□□□ 0.22
SFXN1-210ENST00000513725 CC2D2BQ6DHV5 1058 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms