RNA–Protein interactions for RNA: ENST00000513507.5

APBB3-220, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 3

Gene APBB3, Length 723 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-220ENST00000513507 TRIM35Q9UPQ4 493 aa20.51■□□□□ 0.87
APBB3-220ENST00000513507 ZNF652Q9Y2D9 606 aa20.51■□□□□ 0.87
APBB3-220ENST00000513507 ZNF330Q9Y3S2 320 aaPredicted RBP20.51■□□□□ 0.87
APBB3-220ENST00000513507 C2CD5Q86YS7 1000 aa20.5■□□□□ 0.87
APBB3-220ENST00000513507 DICER1Q9UPY3 1922 aaKnown RBP20.5■□□□□ 0.87
APBB3-220ENST00000513507 CHL1O00533 1208 aa20.49■□□□□ 0.87
APBB3-220ENST00000513507 SLX4Q8IY92 1834 aa20.48■□□□□ 0.87
APBB3-220ENST00000513507 PDIA6Q15084 440 aa20.48■□□□□ 0.87
APBB3-220ENST00000513507 HLFQ16534 295 aa20.48■□□□□ 0.87
APBB3-220ENST00000513507 CNBD1Q8NA66 436 aa20.48■□□□□ 0.87
APBB3-220ENST00000513507 KIF3CO14782 793 aa20.47■□□□□ 0.87
APBB3-220ENST00000513507 SRGNP10124 158 aa20.47■□□□□ 0.87
APBB3-220ENST00000513507 C9orf131Q5VYM1 1079 aa20.47■□□□□ 0.87
APBB3-220ENST00000513507 TSPYL4Q9UJ04 414 aa20.47■□□□□ 0.87
APBB3-220ENST00000513507 ZC3H4Q9UPT8 1303 aaKnown RBP20.47■□□□□ 0.87
APBB3-220ENST00000513507 WDR43Q15061 677 aaKnown RBP eCLIP20.46■□□□□ 0.87
APBB3-220ENST00000513507 STYK1Q6J9G0 422 aa20.46■□□□□ 0.87
APBB3-220ENST00000513507 MAP3K15Q6ZN16 1313 aa20.46■□□□□ 0.87
APBB3-220ENST00000513507 ST5P78524 1137 aa20.45■□□□□ 0.86
APBB3-220ENST00000513507 TPTE2Q6XPS3 522 aa20.45■□□□□ 0.86
APBB3-220ENST00000513507 IBTKQ9P2D0 1353 aaPredicted RBP20.45■□□□□ 0.86
APBB3-220ENST00000513507 RIC1Q4ADV7 1423 aa20.44■□□□□ 0.86
APBB3-220ENST00000513507 PRELPP51888 382 aa20.44■□□□□ 0.86
APBB3-220ENST00000513507 CCDC146Q8IYE0 955 aa20.44■□□□□ 0.86
APBB3-220ENST00000513507 NIP7Q9Y221 180 aaKnown RBP eCLIP20.44■□□□□ 0.86
APBB3-220ENST00000513507 CACNA1SQ13698 1873 aa20.43■□□□□ 0.86
APBB3-220ENST00000513507 TTLL7Q6ZT98 887 aa20.43■□□□□ 0.86
APBB3-220ENST00000513507 NBPF5PQ86XG9 351 aaPredicted RBP20.43■□□□□ 0.86
APBB3-220ENST00000513507 C7orf43Q8WVR3 580 aa20.43■□□□□ 0.86
APBB3-220ENST00000513507 CNKSR1Q969H4 720 aa20.43■□□□□ 0.86
APBB3-220ENST00000513507 MASTLQ96GX5 879 aa20.43■□□□□ 0.86
APBB3-220ENST00000513507 LTBP3Q9NS15 1303 aa20.43■□□□□ 0.86
APBB3-220ENST00000513507 NFKBIEO00221 500 aa20.42■□□□□ 0.86
APBB3-220ENST00000513507 LMNB1P20700 586 aa20.42■□□□□ 0.86
APBB3-220ENST00000513507 ZNF34Q8IZ26 560 aa20.42■□□□□ 0.86
APBB3-220ENST00000513507 CCDC24Q8N4L8 307 aa20.42■□□□□ 0.86
APBB3-220ENST00000513507 RRP7AQ9Y3A4 280 aaKnown RBP20.42■□□□□ 0.86
APBB3-220ENST00000513507 HOXB7P09629 217 aa20.41■□□□□ 0.86
APBB3-220ENST00000513507 ZNF853P0CG23 659 aa20.41■□□□□ 0.86
APBB3-220ENST00000513507 GIGYF2Q6Y7W6 1299 aaKnown RBP20.41■□□□□ 0.86
APBB3-220ENST00000513507 CFAP44Q96MT7 982 aa20.41■□□□□ 0.86
APBB3-220ENST00000513507 TNRC6CQ9HCJ0 1690 aaKnown RBP20.41■□□□□ 0.86
APBB3-220ENST00000513507 ANKRD36CQ5JPF3 1778 aa20.41■□□□□ 0.86
APBB3-220ENST00000513507 RNF181Q9P0P0 153 aa20.4■□□□□ 0.86
APBB3-220ENST00000513507 NPR1P16066 1061 aa20.39■□□□□ 0.85
APBB3-220ENST00000513507 CRY2Q49AN0 593 aa20.39■□□□□ 0.85
APBB3-220ENST00000513507 ZNF526Q8TF50 670 aaPredicted RBP20.39■□□□□ 0.85
APBB3-220ENST00000513507 ZNF622Q969S3 477 aaKnown RBP eCLIP20.39■□□□□ 0.85
APBB3-220ENST00000513507 TIAM2Q8IVF5 1701 aa20.39■□□□□ 0.85
APBB3-220ENST00000513507 UBN2Q6ZU65 1347 aa20.38■□□□□ 0.85
APBB3-220ENST00000513507 MYL6BP14649 208 aa20.38■□□□□ 0.85
APBB3-220ENST00000513507 RASSF7Q02833 373 aa20.38■□□□□ 0.85
APBB3-220ENST00000513507 NEUROD2Q15784 382 aa20.38■□□□□ 0.85
APBB3-220ENST00000513507 KIF6Q6ZMV9 814 aa20.38■□□□□ 0.85
APBB3-220ENST00000513507 NYXQ9GZU5 481 aa20.38■□□□□ 0.85
APBB3-220ENST00000513507 TOMM70O94826 608 aa20.37■□□□□ 0.85
APBB3-220ENST00000513507 NCBP3Q53F19 620 aaKnown RBP20.37■□□□□ 0.85
APBB3-220ENST00000513507 SOGA3Q5TF21 947 aa20.37■□□□□ 0.85
APBB3-220ENST00000513507 PRPF40BQ6NWY9 871 aaKnown RBP20.37■□□□□ 0.85
APBB3-220ENST00000513507 DDX21Q9NR30 783 aaKnown RBP eCLIP20.37■□□□□ 0.85
APBB3-220ENST00000513507 C21orf2O43822 256 aa20.36■□□□□ 0.85
APBB3-220ENST00000513507 PROSER3Q2NL68 480 aa20.36■□□□□ 0.85
APBB3-220ENST00000513507 SNED1Q8TER0 1413 aa20.36■□□□□ 0.85
APBB3-220ENST00000513507 KDM2BQ8NHM5 1336 aa20.35■□□□□ 0.85
APBB3-220ENST00000513507 APAF1O14727 1248 aa20.35■□□□□ 0.85
APBB3-220ENST00000513507 HOXA10P31260 410 aaPredicted RBP20.35■□□□□ 0.85
APBB3-220ENST00000513507 NGEFQ8N5V2 710 aa20.35■□□□□ 0.85
APBB3-220ENST00000513507 NMRK2Q9NPI5 230 aa20.35■□□□□ 0.85
APBB3-220ENST00000513507 ZNF316A6NFI3 1004 aaPredicted RBP20.34■□□□□ 0.85
APBB3-220ENST00000513507 GLTPD2A6NH11 291 aa20.34■□□□□ 0.85
APBB3-220ENST00000513507 NPHP1O15259 732 aa20.34■□□□□ 0.85
APBB3-220ENST00000513507 NTSR2O95665 410 aa20.34■□□□□ 0.85
APBB3-220ENST00000513507 EIF2S2P20042 333 aaKnown RBP20.34■□□□□ 0.85
APBB3-220ENST00000513507 ALDH1B1P30837 517 aa20.34■□□□□ 0.85
APBB3-220ENST00000513507 CCDC184Q52MB2 194 aa20.34■□□□□ 0.85
APBB3-220ENST00000513507 PARP10Q53GL7 1025 aa20.34■□□□□ 0.85
APBB3-220ENST00000513507 SLC10A5Q5PT55 438 aa20.34■□□□□ 0.85
APBB3-220ENST00000513507 SUSD4Q5VX71 490 aa20.34■□□□□ 0.85
APBB3-220ENST00000513507 ZBTB3Q9H5J0 574 aa20.34■□□□□ 0.85
APBB3-220ENST00000513507 ABCC12Q96J65 1359 aa20.34■□□□□ 0.85
APBB3-220ENST00000513507 WDR90Q96KV7 1748 aa20.33■□□□□ 0.85
APBB3-220ENST00000513507 RNF123Q5XPI4 1314 aa20.33■□□□□ 0.85
APBB3-220ENST00000513507 SENP3-EIF4A1A0A087X0R7 540 aa20.33■□□□□ 0.85
APBB3-220ENST00000513507 KRT24Q2M2I5 525 aa20.33■□□□□ 0.85
APBB3-220ENST00000513507 IFT57Q9NWB7 429 aa20.33■□□□□ 0.85
APBB3-220ENST00000513507 HSPA6P17066 643 aa20.32■□□□□ 0.84
APBB3-220ENST00000513507 CCDC27Q2M243 656 aa20.32■□□□□ 0.84
APBB3-220ENST00000513507 COPS6Q7L5N1 327 aa20.32■□□□□ 0.84
APBB3-220ENST00000513507 RBM46Q8TBY0 533 aaKnown RBP20.32■□□□□ 0.84
APBB3-220ENST00000513507 MBIPQ9NS73 344 aa20.32■□□□□ 0.84
APBB3-220ENST00000513507 CEP350Q5VT06 3117 aa20.31■□□□□ 0.84
APBB3-220ENST00000513507 CALD1Q05682 793 aaKnown RBP20.31■□□□□ 0.84
APBB3-220ENST00000513507 ERFEQ4G0M1 354 aa20.31■□□□□ 0.84
APBB3-220ENST00000513507 LAMB2P55268 1798 aa20.31■□□□□ 0.84
APBB3-220ENST00000513507 ANXA1P04083 346 aa20.3■□□□□ 0.84
APBB3-220ENST00000513507 GNAI1P63096 354 aa20.3■□□□□ 0.84
APBB3-220ENST00000513507 PPP1R42Q7Z4L9 355 aa20.3■□□□□ 0.84
APBB3-220ENST00000513507 NUTM1Q86Y26 1132 aa20.3■□□□□ 0.84
APBB3-220ENST00000513507 XAGE3Q8WTP9 111 aa20.3■□□□□ 0.84
APBB3-220ENST00000513507 TAOK3Q9H2K8 898 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms