RNA–Protein interactions for RNA: ENST00000513405.1

AP001999.1-201, humanhuman

TSL 2 BASIC

Gene AP001999.1, Length 3,684 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001999.1-201ENST00000513405 MROH1Q8NDA8 1641 aa16.3■□□□□ 0.2
AP001999.1-201ENST00000513405 LARGE1O95461 756 aa16.3■□□□□ 0.2
AP001999.1-201ENST00000513405 CHAF1AQ13111 956 aaPredicted RBP16.3■□□□□ 0.2
AP001999.1-201ENST00000513405 NEXMIFQ5QGS0 1516 aa16.3■□□□□ 0.2
AP001999.1-201ENST00000513405 ABCA9Q8IUA7 1624 aa16.3■□□□□ 0.2
AP001999.1-201ENST00000513405 ALKQ9UM73 1620 aa16.3■□□□□ 0.2
AP001999.1-201ENST00000513405 PTCH1Q13635 1447 aa16.3■□□□□ 0.2
AP001999.1-201ENST00000513405 GNL2Q13823 731 aaKnown RBP16.3■□□□□ 0.2
AP001999.1-201ENST00000513405 TMEM2Q9UHN6 1383 aa16.3■□□□□ 0.2
AP001999.1-201ENST00000513405 ARHGEF40Q8TER5 1519 aa16.3■□□□□ 0.2
AP001999.1-201ENST00000513405 IGSF3O75054 1194 aa16.3■□□□□ 0.2
AP001999.1-201ENST00000513405 ANKLE2Q86XL3 938 aa16.3■□□□□ 0.2
AP001999.1-201ENST00000513405 TLR7Q9NYK1 1049 aaKnown RBP16.3■□□□□ 0.2
AP001999.1-201ENST00000513405 MAP3K5Q99683 1374 aa16.29■□□□□ 0.2
AP001999.1-201ENST00000513405 A0A087WZG4 1122 aa16.29■□□□□ 0.2
AP001999.1-201ENST00000513405 GCP02774 474 aa16.29■□□□□ 0.2
AP001999.1-201ENST00000513405 CHGBP05060 677 aa16.29■□□□□ 0.2
AP001999.1-201ENST00000513405 ZSCAN22P10073 491 aaPredicted RBP16.29■□□□□ 0.2
AP001999.1-201ENST00000513405 HAND2P61296 217 aa16.29■□□□□ 0.2
AP001999.1-201ENST00000513405 ZHX1Q9UKY1 873 aaPredicted RBP16.29■□□□□ 0.2
AP001999.1-201ENST00000513405 BECN2A8MW95 431 aa16.28■□□□□ 0.2
AP001999.1-201ENST00000513405 EIF4A1P60842 406 aaKnown RBP16.28■□□□□ 0.2
AP001999.1-201ENST00000513405 SLFNL1Q499Z3 407 aa16.28■□□□□ 0.2
AP001999.1-201ENST00000513405 A2ML1A8K2U0 1454 aa16.28■□□□□ 0.2
AP001999.1-201ENST00000513405 SPATA32Q96LK8 384 aa16.28■□□□□ 0.2
AP001999.1-201ENST00000513405 SGSM2O43147 1006 aa16.27■□□□□ 0.2
AP001999.1-201ENST00000513405 SUCLG2Q96I99 432 aa16.27■□□□□ 0.2
AP001999.1-201ENST00000513405 NEO1Q92859 1461 aa16.27■□□□□ 0.2
AP001999.1-201ENST00000513405 ATP2B1P20020 1258 aa16.27■□□□□ 0.2
AP001999.1-201ENST00000513405 ERCC4Q92889 916 aaPredicted RBP16.27■□□□□ 0.19
AP001999.1-201ENST00000513405 SEC62Q99442 399 aaKnown RBP16.27■□□□□ 0.19
AP001999.1-201ENST00000513405 TNMDQ9H2S6 317 aa16.27■□□□□ 0.19
AP001999.1-201ENST00000513405 GRM8O00222 908 aa16.26■□□□□ 0.19
AP001999.1-201ENST00000513405 BRD1O95696 1058 aa16.26■□□□□ 0.19
AP001999.1-201ENST00000513405 CABP4P57796 275 aa16.26■□□□□ 0.19
AP001999.1-201ENST00000513405 TTC21AQ8NDW8 1320 aa16.26■□□□□ 0.19
AP001999.1-201ENST00000513405 A0A087WWV3 80 aa16.26■□□□□ 0.19
AP001999.1-201ENST00000513405 GOLGA6L19H0YKK7 550 aa16.26■□□□□ 0.19
AP001999.1-201ENST00000513405 GOLIM4O00461 696 aa16.26■□□□□ 0.19
AP001999.1-201ENST00000513405 KRT85P78386 507 aa16.26■□□□□ 0.19
AP001999.1-201ENST00000513405 CSPP1Q1MSJ5 1256 aa16.26■□□□□ 0.19
AP001999.1-201ENST00000513405 SASS6Q6UVJ0 657 aa16.26■□□□□ 0.19
AP001999.1-201ENST00000513405 RUFY3Q7L099 469 aa16.26■□□□□ 0.19
AP001999.1-201ENST00000513405 HDAC5Q9UQL6 1122 aa16.26■□□□□ 0.19
AP001999.1-201ENST00000513405 ARAP3Q8WWN8 1544 aa16.26■□□□□ 0.19
AP001999.1-201ENST00000513405 SBNO1A3KN83 1393 aa16.26■□□□□ 0.19
AP001999.1-201ENST00000513405 FRMPD1Q5SYB0 1578 aa16.26■□□□□ 0.19
AP001999.1-201ENST00000513405 TATP17735 454 aaPredicted RBP16.26■□□□□ 0.19
AP001999.1-201ENST00000513405 FILIP1Q7Z7B0 1213 aa16.26■□□□□ 0.19
AP001999.1-201ENST00000513405 ISM2Q6H9L7 571 aa16.25■□□□□ 0.19
AP001999.1-201ENST00000513405 EAF2Q96CJ1 260 aaPredicted RBP16.25■□□□□ 0.19
AP001999.1-201ENST00000513405 SETBP1Q9Y6X0 1596 aa16.25■□□□□ 0.19
AP001999.1-201ENST00000513405 AATKQ6ZMQ8 1374 aa16.25■□□□□ 0.19
AP001999.1-201ENST00000513405 KRT28Q7Z3Y7 464 aa16.25■□□□□ 0.19
AP001999.1-201ENST00000513405 VWDEQ8N2E2 1590 aa16.25■□□□□ 0.19
AP001999.1-201ENST00000513405 F13A1P00488 732 aa16.25■□□□□ 0.19
AP001999.1-201ENST00000513405 PSMA5P28066 241 aa16.25■□□□□ 0.19
AP001999.1-201ENST00000513405 TIMM10P62072 90 aa16.25■□□□□ 0.19
AP001999.1-201ENST00000513405 CCDC183Q5T5S1 534 aa16.25■□□□□ 0.19
AP001999.1-201ENST00000513405 BRF1Q92994 677 aa16.25■□□□□ 0.19
AP001999.1-201ENST00000513405 ZBTB9Q96C00 473 aa16.25■□□□□ 0.19
AP001999.1-201ENST00000513405 CHMP4AQ9BY43 222 aa16.25■□□□□ 0.19
AP001999.1-201ENST00000513405 PPP6R1Q9UPN7 881 aa16.25■□□□□ 0.19
AP001999.1-201ENST00000513405 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.25■□□□□ 0.19
AP001999.1-201ENST00000513405 ATF3P18847 181 aa16.24■□□□□ 0.19
AP001999.1-201ENST00000513405 DDIT3P35638 169 aa16.24■□□□□ 0.19
AP001999.1-201ENST00000513405 CREBRFQ8IUR6 639 aa16.24■□□□□ 0.19
AP001999.1-201ENST00000513405 KIAA0232Q92628 1395 aa16.24■□□□□ 0.19
AP001999.1-201ENST00000513405 ZNF445P59923 1031 aa16.24■□□□□ 0.19
AP001999.1-201ENST00000513405 KSR2Q6VAB6 950 aa16.24■□□□□ 0.19
AP001999.1-201ENST00000513405 SSH3Q8TE77 659 aa16.24■□□□□ 0.19
AP001999.1-201ENST00000513405 MYO3AQ8NEV4 1616 aa16.24■□□□□ 0.19
AP001999.1-201ENST00000513405 CREB3L3Q68CJ9 461 aa16.24■□□□□ 0.19
AP001999.1-201ENST00000513405 NUP62CLQ9H1M0 184 aa16.24■□□□□ 0.19
AP001999.1-201ENST00000513405 COL3A1P02461 1466 aaPredicted RBP16.24■□□□□ 0.19
AP001999.1-201ENST00000513405 RRP9O43818 475 aaKnown RBP16.23■□□□□ 0.19
AP001999.1-201ENST00000513405 HSPA4P34932 840 aa16.23■□□□□ 0.19
AP001999.1-201ENST00000513405 EVA1CP58658 441 aa16.23■□□□□ 0.19
AP001999.1-201ENST00000513405 ERC1Q8IUD2 1116 aa16.23■□□□□ 0.19
AP001999.1-201ENST00000513405 SDF4Q9BRK5 362 aa16.23■□□□□ 0.19
AP001999.1-201ENST00000513405 PIK3C2BO00750 1634 aa16.23■□□□□ 0.19
AP001999.1-201ENST00000513405 IBTKQ9P2D0 1353 aaPredicted RBP16.23■□□□□ 0.19
AP001999.1-201ENST00000513405 JAK2O60674 1132 aa16.23■□□□□ 0.19
AP001999.1-201ENST00000513405 CBX1P83916 185 aa16.23■□□□□ 0.19
AP001999.1-201ENST00000513405 BEND3Q5T5X7 828 aa16.23■□□□□ 0.19
AP001999.1-201ENST00000513405 DACT1Q9NYF0 836 aa16.23■□□□□ 0.19
AP001999.1-201ENST00000513405 ZKSCAN5Q9Y2L8 839 aa16.23■□□□□ 0.19
AP001999.1-201ENST00000513405 USP6P35125 1406 aa16.23■□□□□ 0.19
AP001999.1-201ENST00000513405 RNMTO43148 476 aaKnown RBP16.23■□□□□ 0.19
AP001999.1-201ENST00000513405 LMBR1LQ6UX01 489 aa16.23■□□□□ 0.19
AP001999.1-201ENST00000513405 SHPRHQ149N8 1683 aa16.23■□□□□ 0.19
AP001999.1-201ENST00000513405 A0A0D9SFI3 127 aa16.22■□□□□ 0.19
AP001999.1-201ENST00000513405 ME1P48163 572 aa16.22■□□□□ 0.19
AP001999.1-201ENST00000513405 TFCP2Q12800 502 aa16.22■□□□□ 0.19
AP001999.1-201ENST00000513405 ME3Q16798 604 aa16.22■□□□□ 0.19
AP001999.1-201ENST00000513405 TOM1L2Q6ZVM7 507 aa16.22■□□□□ 0.19
AP001999.1-201ENST00000513405 LUZP1Q86V48 1076 aa16.22■□□□□ 0.19
AP001999.1-201ENST00000513405 CCDC82Q8N4S0 544 aa16.22■□□□□ 0.19
AP001999.1-201ENST00000513405 IP6K1Q92551 441 aa16.22■□□□□ 0.19
AP001999.1-201ENST00000513405 USP16Q9Y5T5 823 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms