RNA–Protein interactions for RNA: ENST00000512923.5

SSBP2-216, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-216ENST00000512923 CCNL1Q9UK58 526 aaPredicted RBP12.9□□□□□ -0.34
SSBP2-216ENST00000512923 ERBB4Q15303 1308 aa12.9□□□□□ -0.34
SSBP2-216ENST00000512923 C4BP0C0L5 1744 aa12.89□□□□□ -0.35
SSBP2-216ENST00000512923 HMGB2P26583 209 aaKnown RBP12.89□□□□□ -0.35
SSBP2-216ENST00000512923 SLC27A3Q5K4L6 730 aa12.89□□□□□ -0.35
SSBP2-216ENST00000512923 CCDC125Q86Z20 511 aa12.89□□□□□ -0.35
SSBP2-216ENST00000512923 SMC4Q9NTJ3 1288 aa12.89□□□□□ -0.35
SSBP2-216ENST00000512923 USP16Q9Y5T5 823 aa12.89□□□□□ -0.35
SSBP2-216ENST00000512923 KIF16BQ96L93 1317 aa12.89□□□□□ -0.35
SSBP2-216ENST00000512923 IER5LQ5T953 404 aa12.88□□□□□ -0.35
SSBP2-216ENST00000512923 SSH1Q8WYL5 1049 aa12.88□□□□□ -0.35
SSBP2-216ENST00000512923 NECTIN2Q92692 538 aa12.88□□□□□ -0.35
SSBP2-216ENST00000512923 DBF4Q9UBU7 674 aaPredicted RBP12.88□□□□□ -0.35
SSBP2-216ENST00000512923 CYP19A1P11511 503 aaPredicted RBP12.88□□□□□ -0.35
SSBP2-216ENST00000512923 BAG6P46379 1132 aa12.88□□□□□ -0.35
SSBP2-216ENST00000512923 ITPK1Q13572 414 aa12.88□□□□□ -0.35
SSBP2-216ENST00000512923 BCL2L13Q9BXK5 485 aa12.88□□□□□ -0.35
SSBP2-216ENST00000512923 CHPF2Q9P2E5 772 aa12.88□□□□□ -0.35
SSBP2-216ENST00000512923 CIZ1Q9ULV3 898 aaPredicted RBP12.88□□□□□ -0.35
SSBP2-216ENST00000512923 TCERG1O14776 1098 aaKnown RBP12.87□□□□□ -0.35
SSBP2-216ENST00000512923 BRPF1P55201 1214 aaPredicted RBP12.87□□□□□ -0.35
SSBP2-216ENST00000512923 TXNRD1Q16881 649 aa12.87□□□□□ -0.35
SSBP2-216ENST00000512923 DDX21Q9NR30 783 aaKnown RBP eCLIP12.87□□□□□ -0.35
SSBP2-216ENST00000512923 CNTNAP4Q9C0A0 1308 aa12.86□□□□□ -0.35
SSBP2-216ENST00000512923 NUP188Q5SRE5 1749 aa12.86□□□□□ -0.35
SSBP2-216ENST00000512923 BCAR3O75815 825 aa12.86□□□□□ -0.35
SSBP2-216ENST00000512923 CRKLP46109 303 aaKnown RBP12.86□□□□□ -0.35
SSBP2-216ENST00000512923 MAMSTRQ6ZN01 415 aa12.86□□□□□ -0.35
SSBP2-216ENST00000512923 MRPL50Q8N5N7 158 aaKnown RBP12.86□□□□□ -0.35
SSBP2-216ENST00000512923 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.86□□□□□ -0.35
SSBP2-216ENST00000512923 LINC00116Q8NCU8 138 aa12.86□□□□□ -0.35
SSBP2-216ENST00000512923 CCDC87Q9NVE4 849 aa12.86□□□□□ -0.35
SSBP2-216ENST00000512923 HYPKQ9NX55 129 aa12.86□□□□□ -0.35
SSBP2-216ENST00000512923 MYH14Q7Z406 1995 aaKnown RBP12.85□□□□□ -0.35
SSBP2-216ENST00000512923 A1BGP04217 495 aa12.85□□□□□ -0.35
SSBP2-216ENST00000512923 CANXP27824 592 aaKnown RBP12.85□□□□□ -0.35
SSBP2-216ENST00000512923 KCNQ4P56696 695 aa12.85□□□□□ -0.35
SSBP2-216ENST00000512923 SCUBE2Q9NQ36 999 aa12.85□□□□□ -0.35
SSBP2-216ENST00000512923 LRRC4BQ9NT99 713 aa12.85□□□□□ -0.35
SSBP2-216ENST00000512923 IPO8O15397 1037 aaKnown RBP12.84□□□□□ -0.35
SSBP2-216ENST00000512923 MYL6BP14649 208 aa12.84□□□□□ -0.35
SSBP2-216ENST00000512923 PDIA6Q15084 440 aa12.84□□□□□ -0.35
SSBP2-216ENST00000512923 RC3H1Q5TC82 1133 aaKnown RBP12.84□□□□□ -0.35
SSBP2-216ENST00000512923 ZBTB1Q9Y2K1 713 aa12.84□□□□□ -0.35
SSBP2-216ENST00000512923 PTPRCP08575 1304 aa12.83□□□□□ -0.35
SSBP2-216ENST00000512923 UBR3Q6ZT12 1888 aa12.83□□□□□ -0.36
SSBP2-216ENST00000512923 ARFGEF2Q9Y6D5 1785 aa12.83□□□□□ -0.36
SSBP2-216ENST00000512923 NBPF26B4DH59 902 aa12.83□□□□□ -0.36
SSBP2-216ENST00000512923 ANXA1P04083 346 aa12.83□□□□□ -0.36
SSBP2-216ENST00000512923 IL6STP40189 918 aaPredicted RBP12.83□□□□□ -0.36
SSBP2-216ENST00000512923 RRP1P56182 461 aaKnown RBP12.83□□□□□ -0.36
SSBP2-216ENST00000512923 EN1Q05925 392 aaPredicted RBP12.83□□□□□ -0.36
SSBP2-216ENST00000512923 FLIIQ13045 1269 aa12.83□□□□□ -0.36
SSBP2-216ENST00000512923 PROSER3Q2NL68 480 aa12.83□□□□□ -0.36
SSBP2-216ENST00000512923 NBPF14Q5TI25 921 aa12.83□□□□□ -0.36
SSBP2-216ENST00000512923 NBPF10Q6P3W6 841 aaKnown RBP12.83□□□□□ -0.36
SSBP2-216ENST00000512923 INTS5Q6P9B9 1019 aaKnown RBP12.83□□□□□ -0.36
SSBP2-216ENST00000512923 ZNF467Q7Z7K2 595 aaPredicted RBP12.83□□□□□ -0.36
SSBP2-216ENST00000512923 NPM2Q86SE8 214 aaKnown RBP12.83□□□□□ -0.36
SSBP2-216ENST00000512923 NBPF15Q8N660 670 aa12.83□□□□□ -0.36
SSBP2-216ENST00000512923 FRAT1Q92837 279 aaPredicted RBP12.83□□□□□ -0.36
SSBP2-216ENST00000512923 AK7Q96M32 723 aa12.83□□□□□ -0.36
SSBP2-216ENST00000512923 CAMKK2Q96RR4 588 aa12.83□□□□□ -0.36
SSBP2-216ENST00000512923 SUPT16HQ9Y5B9 1047 aaKnown RBP12.83□□□□□ -0.36
SSBP2-216ENST00000512923 N4BP2Q86UW6 1770 aaPredicted RBP12.82□□□□□ -0.36
SSBP2-216ENST00000512923 DDX58O95786 925 aaKnown RBP12.82□□□□□ -0.36
SSBP2-216ENST00000512923 CHRM1P11229 460 aaPredicted RBP12.82□□□□□ -0.36
SSBP2-216ENST00000512923 PIP4K2AP48426 406 aaPredicted RBP12.82□□□□□ -0.36
SSBP2-216ENST00000512923 FKBP5Q13451 457 aaPredicted RBP12.82□□□□□ -0.36
SSBP2-216ENST00000512923 EZH2Q15910 746 aaKnown RBP12.82□□□□□ -0.36
SSBP2-216ENST00000512923 ZKSCAN2Q63HK3 967 aa12.82□□□□□ -0.36
SSBP2-216ENST00000512923 ARHGAP45Q92619 1136 aa12.82□□□□□ -0.36
SSBP2-216ENST00000512923 PHAXQ9H814 394 aaKnown RBP12.82□□□□□ -0.36
SSBP2-216ENST00000512923 NOB1Q9ULX3 412 aaKnown RBP12.82□□□□□ -0.36
SSBP2-216ENST00000512923 C4AP0C0L4 1744 aa12.82□□□□□ -0.36
SSBP2-216ENST00000512923 RNF123Q5XPI4 1314 aa12.82□□□□□ -0.36
SSBP2-216ENST00000512923 BCORQ6W2J9 1755 aa12.81□□□□□ -0.36
SSBP2-216ENST00000512923 QSER1Q2KHR3 1735 aa12.81□□□□□ -0.36
SSBP2-216ENST00000512923 G2E3Q7L622 706 aa12.81□□□□□ -0.36
SSBP2-216ENST00000512923 LRP10Q7Z4F1 713 aa12.81□□□□□ -0.36
SSBP2-216ENST00000512923 DEFB132Q7Z7B7 95 aa12.81□□□□□ -0.36
SSBP2-216ENST00000512923 UPF1Q92900 1129 aaKnown RBP eCLIP12.81□□□□□ -0.36
SSBP2-216ENST00000512923 API5Q9BZZ5 524 aaKnown RBP12.81□□□□□ -0.36
SSBP2-216ENST00000512923 ZNF330Q9Y3S2 320 aaPredicted RBP12.81□□□□□ -0.36
SSBP2-216ENST00000512923 TUBGCP6Q96RT7 1819 aa12.81□□□□□ -0.36
SSBP2-216ENST00000512923 COL15A1P39059 1388 aa12.8□□□□□ -0.36
SSBP2-216ENST00000512923 SCN7AQ01118 1682 aa12.8□□□□□ -0.36
SSBP2-216ENST00000512923 PXDNLA1KZ92 1463 aa12.8□□□□□ -0.36
SSBP2-216ENST00000512923 GNPATO15228 680 aa12.8□□□□□ -0.36
SSBP2-216ENST00000512923 RPS6KA4O75676 772 aa12.8□□□□□ -0.36
SSBP2-216ENST00000512923 MS4A1P11836 297 aa12.8□□□□□ -0.36
SSBP2-216ENST00000512923 PLCG2P16885 1265 aa12.8□□□□□ -0.36
SSBP2-216ENST00000512923 EIF5P55010 431 aaKnown RBP12.8□□□□□ -0.36
SSBP2-216ENST00000512923 IRX5P78411 483 aaPredicted RBP12.8□□□□□ -0.36
SSBP2-216ENST00000512923 AIMP1Q12904 312 aaKnown RBP12.8□□□□□ -0.36
SSBP2-216ENST00000512923 ATF7IPQ6VMQ6 1270 aa12.8□□□□□ -0.36
SSBP2-216ENST00000512923 COPS6Q7L5N1 327 aa12.8□□□□□ -0.36
SSBP2-216ENST00000512923 XAGE3Q8WTP9 111 aa12.8□□□□□ -0.36
SSBP2-216ENST00000512923 RTCBQ9Y3I0 505 aaKnown RBP12.8□□□□□ -0.36
SSBP2-216ENST00000512923 PLIN1O60240 522 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms