RNA–Protein interactions for RNA: ENST00000512876.5

MATR3-220, Transcript of matrin 3, humanhuman

TSL 3

Gene MATR3, Length 575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-220ENST00000512876 NFKBIEO00221 500 aa22.18■■□□□ 1.14
MATR3-220ENST00000512876 ST5P78524 1137 aa22.18■■□□□ 1.14
MATR3-220ENST00000512876 TOMM70O94826 608 aa22.17■■□□□ 1.14
MATR3-220ENST00000512876 LMNB1P20700 586 aa22.17■■□□□ 1.14
MATR3-220ENST00000512876 SRGNP10124 158 aa22.16■■□□□ 1.14
MATR3-220ENST00000512876 ZNF622Q969S3 477 aaKnown RBP eCLIP22.16■■□□□ 1.142e-27■■□□□ 11.5
MATR3-220ENST00000512876 ARFGEF2Q9Y6D5 1785 aa22.15■■□□□ 1.14
MATR3-220ENST00000512876 KDM2BQ8NHM5 1336 aa22.15■■□□□ 1.14
MATR3-220ENST00000512876 TNRC6CQ9HCJ0 1690 aaKnown RBP22.15■■□□□ 1.14
MATR3-220ENST00000512876 STYK1Q6J9G0 422 aa22.15■■□□□ 1.14
MATR3-220ENST00000512876 NBPF5PQ86XG9 351 aaPredicted RBP22.15■■□□□ 1.14
MATR3-220ENST00000512876 TIAM2Q8IVF5 1701 aa22.14■■□□□ 1.14
MATR3-220ENST00000512876 KLRG2A4D1S0 409 aaPredicted RBP22.14■■□□□ 1.13
MATR3-220ENST00000512876 NPHP1O15259 732 aa22.14■■□□□ 1.13
MATR3-220ENST00000512876 HLFQ16534 295 aa22.14■■□□□ 1.13
MATR3-220ENST00000512876 NIP7Q9Y221 180 aaKnown RBP eCLIP22.14■■□□□ 1.13
MATR3-220ENST00000512876 FER1L6Q2WGJ9 1857 aa22.13■■□□□ 1.13
MATR3-220ENST00000512876 TMPOP42166 694 aaKnown RBP22.13■■□□□ 1.13
MATR3-220ENST00000512876 RIPK4P57078 832 aa22.13■■□□□ 1.13
MATR3-220ENST00000512876 ERBB4Q15303 1308 aa22.12■■□□□ 1.13
MATR3-220ENST00000512876 C21orf2O43822 256 aa22.12■■□□□ 1.13
MATR3-220ENST00000512876 CNKSR1Q969H4 720 aa22.12■■□□□ 1.13
MATR3-220ENST00000512876 MASTLQ96GX5 879 aa22.12■■□□□ 1.13
MATR3-220ENST00000512876 BABAM1Q9NWV8 329 aa22.12■■□□□ 1.13
MATR3-220ENST00000512876 SLX4Q8IY92 1834 aa22.12■■□□□ 1.13
MATR3-220ENST00000512876 LTBP3Q9NS15 1303 aa22.11■■□□□ 1.13
MATR3-220ENST00000512876 ERVV-1B6SEH8 477 aa22.11■■□□□ 1.13
MATR3-220ENST00000512876 PRPF40BQ6NWY9 871 aaKnown RBP22.11■■□□□ 1.13
MATR3-220ENST00000512876 RBM46Q8TBY0 533 aaKnown RBP22.11■■□□□ 1.13
MATR3-220ENST00000512876 TSPYL4Q9UJ04 414 aa22.11■■□□□ 1.13
MATR3-220ENST00000512876 MAP3K15Q6ZN16 1313 aa22.1■■□□□ 1.13
MATR3-220ENST00000512876 LMOD3Q0VAK6 560 aa22.1■■□□□ 1.13
MATR3-220ENST00000512876 TPTE2Q6XPS3 522 aa22.1■■□□□ 1.13
MATR3-220ENST00000512876 TTLL7Q6ZT98 887 aa22.09■■□□□ 1.13
MATR3-220ENST00000512876 LRP10Q7Z4F1 713 aa22.09■■□□□ 1.13
MATR3-220ENST00000512876 IBTKQ9P2D0 1353 aaPredicted RBP22.09■■□□□ 1.13
MATR3-220ENST00000512876 GLTPD2A6NH11 291 aa22.08■■□□□ 1.13
MATR3-220ENST00000512876 C7orf43Q8WVR3 580 aa22.08■■□□□ 1.13
MATR3-220ENST00000512876 RRP7AQ9Y3A4 280 aaKnown RBP22.08■■□□□ 1.13
MATR3-220ENST00000512876 CCDC88AQ3V6T2 1871 aa22.08■■□□□ 1.13
MATR3-220ENST00000512876 NUP98P52948 1817 aa22.08■■□□□ 1.12
MATR3-220ENST00000512876 RIC1Q4ADV7 1423 aa22.07■■□□□ 1.12
MATR3-220ENST00000512876 CACNA1SQ13698 1873 aa22.07■■□□□ 1.12
MATR3-220ENST00000512876 NPR1P16066 1061 aa22.07■■□□□ 1.12
MATR3-220ENST00000512876 SOGA3Q5TF21 947 aa22.07■■□□□ 1.12
MATR3-220ENST00000512876 NGEFQ8N5V2 710 aa22.07■■□□□ 1.12
MATR3-220ENST00000512876 TAOK3Q9H2K8 898 aa22.07■■□□□ 1.12
MATR3-220ENST00000512876 ZNF219Q9P2Y4 722 aaPredicted RBP22.07■■□□□ 1.12
MATR3-220ENST00000512876 ABCC12Q96J65 1359 aa22.07■■□□□ 1.12
MATR3-220ENST00000512876 DICER1Q9UPY3 1922 aaKnown RBP22.06■■□□□ 1.12
MATR3-220ENST00000512876 MYL6BP14649 208 aa22.06■■□□□ 1.12
MATR3-220ENST00000512876 PDIA6Q15084 440 aa22.06■■□□□ 1.12
MATR3-220ENST00000512876 KIF6Q6ZMV9 814 aa22.06■■□□□ 1.12
MATR3-220ENST00000512876 CCDC146Q8IYE0 955 aa22.06■■□□□ 1.12
MATR3-220ENST00000512876 PRKRIP1Q9H875 184 aaPredicted RBP22.06■■□□□ 1.12
MATR3-220ENST00000512876 RRAGCQ9HB90 399 aa22.06■■□□□ 1.12
MATR3-220ENST00000512876 UBN2Q6ZU65 1347 aa22.06■■□□□ 1.12
MATR3-220ENST00000512876 APLP1P51693 650 aa22.05■■□□□ 1.12
MATR3-220ENST00000512876 RUNDC1Q96C34 613 aa22.05■■□□□ 1.12
MATR3-220ENST00000512876 FAM177BA6PVY3 158 aa22.04■■□□□ 1.12
MATR3-220ENST00000512876 FSTL1Q12841 308 aa22.04■■□□□ 1.12
MATR3-220ENST00000512876 WDR43Q15061 677 aaKnown RBP eCLIP22.04■■□□□ 1.127e-6■■□□□ 14.2
MATR3-220ENST00000512876 CRY2Q49AN0 593 aa22.04■■□□□ 1.12
MATR3-220ENST00000512876 C16orf71Q8IYS4 520 aaPredicted RBP22.04■■□□□ 1.12
MATR3-220ENST00000512876 NYXQ9GZU5 481 aa22.04■■□□□ 1.12
MATR3-220ENST00000512876 TRIM35Q9UPQ4 493 aa22.04■■□□□ 1.12
MATR3-220ENST00000512876 WDR90Q96KV7 1748 aa22.03■■□□□ 1.12
MATR3-220ENST00000512876 ZBTB3Q9H5J0 574 aa22.03■■□□□ 1.12
MATR3-220ENST00000512876 ADAMTS8Q9UP79 889 aa22.03■■□□□ 1.12
MATR3-220ENST00000512876 CHL1O00533 1208 aa22.02■■□□□ 1.12
MATR3-220ENST00000512876 ERFEQ4G0M1 354 aa22.02■■□□□ 1.12
MATR3-220ENST00000512876 CCDC93Q567U6 631 aa22.02■■□□□ 1.12
MATR3-220ENST00000512876 GIGYF2Q6Y7W6 1299 aaKnown RBP22.02■■□□□ 1.12
MATR3-220ENST00000512876 ZNF34Q8IZ26 560 aa22.02■■□□□ 1.12
MATR3-220ENST00000512876 SNED1Q8TER0 1413 aa22.02■■□□□ 1.12
MATR3-220ENST00000512876 PROSER3Q2NL68 480 aa22.01■■□□□ 1.11
MATR3-220ENST00000512876 NUTM1Q86Y26 1132 aa22.01■■□□□ 1.11
MATR3-220ENST00000512876 VEGFAP15692 232 aaPredicted RBP22■■□□□ 1.11
MATR3-220ENST00000512876 EIF2S2P20042 333 aaKnown RBP22■■□□□ 1.11
MATR3-220ENST00000512876 GPTP24298 496 aa22■■□□□ 1.11
MATR3-220ENST00000512876 GTF2E1P29083 439 aaPredicted RBP22■■□□□ 1.11
MATR3-220ENST00000512876 NEUROD2Q15784 382 aa22■■□□□ 1.11
MATR3-220ENST00000512876 POTECB2RU33 542 aa21.99■■□□□ 1.11
MATR3-220ENST00000512876 NTSR2O95665 410 aa21.99■■□□□ 1.11
MATR3-220ENST00000512876 SUSD4Q5VX71 490 aa21.99■■□□□ 1.11
MATR3-220ENST00000512876 ANXA1P04083 346 aa21.98■■□□□ 1.11
MATR3-220ENST00000512876 ALDH1B1P30837 517 aa21.98■■□□□ 1.11
MATR3-220ENST00000512876 SMC1BQ8NDV3 1235 aa21.98■■□□□ 1.11
MATR3-220ENST00000512876 HOXA10P31260 410 aaPredicted RBP21.97■■□□□ 1.11
MATR3-220ENST00000512876 FKBP4Q02790 459 aaKnown RBP eCLIP21.97■■□□□ 1.118e-7■■■□□ 16.6
MATR3-220ENST00000512876 KRT24Q2M2I5 525 aa21.97■■□□□ 1.11
MATR3-220ENST00000512876 PARP10Q53GL7 1025 aa21.97■■□□□ 1.11
MATR3-220ENST00000512876 DPY19L2Q6NUT2 758 aa21.97■■□□□ 1.11
MATR3-220ENST00000512876 OLFM4Q6UX06 510 aa21.97■■□□□ 1.11
MATR3-220ENST00000512876 DNAJC5GQ8N7S2 189 aa21.97■■□□□ 1.11
MATR3-220ENST00000512876 ANKRD36CQ5JPF3 1778 aa21.95■■□□□ 1.1
MATR3-220ENST00000512876 HOXB7P09629 217 aa21.95■■□□□ 1.1
MATR3-220ENST00000512876 RTKN2Q8IZC4 609 aa21.95■■□□□ 1.1
MATR3-220ENST00000512876 DDX21Q9NR30 783 aaKnown RBP eCLIP21.94■■□□□ 1.1
MATR3-220ENST00000512876 RNF123Q5XPI4 1314 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms