RNA–Protein interactions for RNA: ENST00000512069.6

PDE4D-220, Transcript of phosphodiesterase 4D, humanhuman

TSL 2

Gene PDE4D, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-220ENST00000512069 HCN4Q9Y3Q4 1203 aa9.09□□□□□ -0.95
PDE4D-220ENST00000512069 GPC6Q9Y625 555 aaPredicted RBP9.09□□□□□ -0.95
PDE4D-220ENST00000512069 CTBSQ01459 385 aa9.08□□□□□ -0.96
PDE4D-220ENST00000512069 ACDQ96AP0 544 aa9.08□□□□□ -0.96
PDE4D-220ENST00000512069 PCDHGC4Q9Y5F7 938 aa9.08□□□□□ -0.96
PDE4D-220ENST00000512069 ATXN7O15265 892 aaPredicted RBP9.07□□□□□ -0.96
PDE4D-220ENST00000512069 ARHGEF15O94989 841 aa9.07□□□□□ -0.96
PDE4D-220ENST00000512069 FIGNL1Q6PIW4 674 aa9.07□□□□□ -0.96
PDE4D-220ENST00000512069 STK32AQ8WU08 396 aa9.07□□□□□ -0.96
PDE4D-220ENST00000512069 CHMP7Q8WUX9 453 aaPredicted RBP9.07□□□□□ -0.96
PDE4D-220ENST00000512069 HCN2Q9UL51 889 aa9.07□□□□□ -0.96
PDE4D-220ENST00000512069 ATXN7L1Q9ULK2 861 aaPredicted RBP9.07□□□□□ -0.96
PDE4D-220ENST00000512069 NSFL1CQ9UNZ2 370 aaKnown RBP9.07□□□□□ -0.96
PDE4D-220ENST00000512069 GJA3Q9Y6H8 435 aa9.07□□□□□ -0.96
PDE4D-220ENST00000512069 DCDC2BA2VCK2 349 aa9.06□□□□□ -0.96
PDE4D-220ENST00000512069 C2CD2LO14523 706 aa9.06□□□□□ -0.96
PDE4D-220ENST00000512069 FOXO3O43524 673 aa9.06□□□□□ -0.96
PDE4D-220ENST00000512069 FGFR3P22607 806 aa9.06□□□□□ -0.96
PDE4D-220ENST00000512069 TMEM164Q5U3C3 297 aa9.06□□□□□ -0.96
PDE4D-220ENST00000512069 KHNYNO15037 678 aaKnown RBP9.05□□□□□ -0.96
PDE4D-220ENST00000512069 LRRC69Q6ZNQ3 347 aa9.05□□□□□ -0.96
PDE4D-220ENST00000512069 MAPTP10636 758 aaKnown RBP9.04□□□□□ -0.96
PDE4D-220ENST00000512069 BCRP11274 1271 aa9.04□□□□□ -0.96
PDE4D-220ENST00000512069 BMP4P12644 408 aa9.04□□□□□ -0.96
PDE4D-220ENST00000512069 MAP3K10Q02779 954 aa9.04□□□□□ -0.96
PDE4D-220ENST00000512069 TNP2Q05952 138 aa9.04□□□□□ -0.96
PDE4D-220ENST00000512069 ALDH16A1Q8IZ83 802 aa9.04□□□□□ -0.96
PDE4D-220ENST00000512069 CLP1Q92989 425 aaKnown RBP9.04□□□□□ -0.96
PDE4D-220ENST00000512069 PHACTR1Q9C0D0 580 aa9.04□□□□□ -0.96
PDE4D-220ENST00000512069 CD33P20138 364 aa9.03□□□□□ -0.96
PDE4D-220ENST00000512069 MAP2K3P46734 347 aa9.03□□□□□ -0.96
PDE4D-220ENST00000512069 OCLNQ16625 522 aa9.03□□□□□ -0.96
PDE4D-220ENST00000512069 SAMD5Q5TGI4 173 aa9.03□□□□□ -0.96
PDE4D-220ENST00000512069 OXCT2Q9BYC2 517 aaPredicted RBP9.03□□□□□ -0.96
PDE4D-220ENST00000512069 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.03□□□□□ -0.96
PDE4D-220ENST00000512069 C1orf229Q6ZS94 237 aaPredicted RBP9.02□□□□□ -0.97
PDE4D-220ENST00000512069 RHPN1Q8TCX5 695 aa9.02□□□□□ -0.97
PDE4D-220ENST00000512069 PRIMPOLQ96LW4 560 aa9.02□□□□□ -0.97
PDE4D-220ENST00000512069 NEUROD4Q9HD90 331 aa9.02□□□□□ -0.97
PDE4D-220ENST00000512069 STRN4Q9NRL3 753 aa9.02□□□□□ -0.97
PDE4D-220ENST00000512069 ANKIB1Q9P2G1 1089 aa9.02□□□□□ -0.97
PDE4D-220ENST00000512069 NGLY1Q96IV0 654 aa9.01□□□□□ -0.97
PDE4D-220ENST00000512069 ARID3AQ99856 593 aa9.01□□□□□ -0.97
PDE4D-220ENST00000512069 PRMT3O60678 531 aa9□□□□□ -0.97
PDE4D-220ENST00000512069 MARSP56192 900 aaKnown RBP9□□□□□ -0.97
PDE4D-220ENST00000512069 RTN1Q16799 776 aa9□□□□□ -0.97
PDE4D-220ENST00000512069 ZNF280CQ8ND82 737 aa9□□□□□ -0.97
PDE4D-220ENST00000512069 NEDD1Q8NHV4 660 aa9□□□□□ -0.97
PDE4D-220ENST00000512069 HSH2DQ96JZ2 352 aa9□□□□□ -0.97
PDE4D-220ENST00000512069 ENAMQ9NRM1 1142 aa9□□□□□ -0.97
PDE4D-220ENST00000512069 CXXC1Q9P0U4 656 aaPredicted RBP9□□□□□ -0.97
PDE4D-220ENST00000512069 TMEM88BA6NKF7 163 aa8.99□□□□□ -0.97
PDE4D-220ENST00000512069 OIP5O43482 229 aa8.99□□□□□ -0.97
PDE4D-220ENST00000512069 FAM157BP0CG42 384 aa8.99□□□□□ -0.97
PDE4D-220ENST00000512069 HIF1AQ16665 826 aa8.99□□□□□ -0.97
PDE4D-220ENST00000512069 GALNT6Q8NCL4 622 aa8.99□□□□□ -0.97
PDE4D-220ENST00000512069 COL26A1Q96A83 441 aa8.99□□□□□ -0.97
PDE4D-220ENST00000512069 VTI1AQ96AJ9 217 aa8.99□□□□□ -0.97
PDE4D-220ENST00000512069 SUSD3Q96L08 255 aa8.99□□□□□ -0.97
PDE4D-220ENST00000512069 SLAIN2Q9P270 581 aa8.99□□□□□ -0.97
PDE4D-220ENST00000512069 FKBP5Q13451 457 aaPredicted RBP8.98□□□□□ -0.97
PDE4D-220ENST00000512069 LAMC2Q13753 1193 aa8.98□□□□□ -0.97
PDE4D-220ENST00000512069 GRIN2CQ14957 1233 aa8.98□□□□□ -0.97
PDE4D-220ENST00000512069 MYO19Q96H55 970 aa8.98□□□□□ -0.97
PDE4D-220ENST00000512069 GGA1Q9UJY5 639 aa8.98□□□□□ -0.97
PDE4D-220ENST00000512069 DNMT3AQ9Y6K1 912 aaPredicted RBP8.98□□□□□ -0.97
PDE4D-220ENST00000512069 SHISA8B8ZZ34 492 aa8.97□□□□□ -0.97
PDE4D-220ENST00000512069 EFSO43281 561 aa8.97□□□□□ -0.97
PDE4D-220ENST00000512069 SFSWAPQ12872 951 aaKnown RBP8.97□□□□□ -0.97
PDE4D-220ENST00000512069 FAM182BQ5T319 152 aa8.97□□□□□ -0.97
PDE4D-220ENST00000512069 MARK1Q9P0L2 795 aa8.97□□□□□ -0.97
PDE4D-220ENST00000512069 NEURL1BA8MQ27 555 aa8.96□□□□□ -0.98
PDE4D-220ENST00000512069 GSK3AP49840 483 aa8.96□□□□□ -0.98
PDE4D-220ENST00000512069 EDARADDQ8WWZ3 215 aa8.96□□□□□ -0.98
PDE4D-220ENST00000512069 QTRT2Q9H974 415 aaKnown RBP8.96□□□□□ -0.98
PDE4D-220ENST00000512069 KLF15Q9UIH9 416 aa8.96□□□□□ -0.98
PDE4D-220ENST00000512069 GDF2Q9UK05 429 aaPredicted RBP8.96□□□□□ -0.98
PDE4D-220ENST00000512069 CNTNAP5Q8WYK1 1306 aa8.96□□□□□ -0.98
PDE4D-220ENST00000512069 PCBP4P57723 403 aaKnown RBP8.95□□□□□ -0.98
PDE4D-220ENST00000512069 KCNMA1Q12791 1236 aa8.95□□□□□ -0.98
PDE4D-220ENST00000512069 GOLGA6L1Q8N7Z2 621 aa8.95□□□□□ -0.98
PDE4D-220ENST00000512069 CEP63Q96MT8 703 aa8.95□□□□□ -0.98
PDE4D-220ENST00000512069 LRRC4BQ9NT99 713 aa8.95□□□□□ -0.98
PDE4D-220ENST00000512069 PTCD1O75127 700 aaKnown RBP8.94□□□□□ -0.98
PDE4D-220ENST00000512069 ARAFP10398 606 aa8.94□□□□□ -0.98
PDE4D-220ENST00000512069 ATP2B4P23634 1241 aa8.94□□□□□ -0.98
PDE4D-220ENST00000512069 IRS1P35568 1242 aa8.94□□□□□ -0.98
PDE4D-220ENST00000512069 C11orf91Q3C1V1 193 aa8.94□□□□□ -0.98
PDE4D-220ENST00000512069 IER5Q5VY09 327 aa8.94□□□□□ -0.98
PDE4D-220ENST00000512069 DMGDHQ9UI17 866 aaKnown RBP8.94□□□□□ -0.98
PDE4D-220ENST00000512069 PRR12Q9ULL5 1215 aa8.94□□□□□ -0.98
PDE4D-220ENST00000512069 SSFA2P28290 1259 aa8.93□□□□□ -0.98
PDE4D-220ENST00000512069 KCNQ4P56696 695 aa8.93□□□□□ -0.98
PDE4D-220ENST00000512069 RASSF7Q02833 373 aa8.93□□□□□ -0.98
PDE4D-220ENST00000512069 LRFN2Q9ULH4 789 aa8.93□□□□□ -0.98
PDE4D-220ENST00000512069 BCS1LQ9Y276 419 aa8.93□□□□□ -0.98
PDE4D-220ENST00000512069 USTQ9Y2C2 406 aa8.93□□□□□ -0.98
PDE4D-220ENST00000512069 TGFBR3LH3BV60 316 aa8.92□□□□□ -0.98
PDE4D-220ENST00000512069 SNRPNP63162 240 aaKnown RBP8.92□□□□□ -0.98
PDE4D-220ENST00000512069 COX20Q5RI15 118 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms