RNA–Protein interactions for RNA: ENST00000512019.1

SMAD1-211, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 847 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-211ENST00000512019 COL15A1P39059 1388 aa25.25■■□□□ 1.63
SMAD1-211ENST00000512019 ZPR1O75312 459 aa25.24■■□□□ 1.63
SMAD1-211ENST00000512019 PIM2Q9P1W9 311 aa25.24■■□□□ 1.63
SMAD1-211ENST00000512019 DLEC1Q9Y238 1755 aa25.23■■□□□ 1.63
SMAD1-211ENST00000512019 HSPA6P17066 643 aa25.23■■□□□ 1.63
SMAD1-211ENST00000512019 EXOSC9Q06265 439 aaKnown RBP25.23■■□□□ 1.63
SMAD1-211ENST00000512019 KRT24Q2M2I5 525 aa25.23■■□□□ 1.63
SMAD1-211ENST00000512019 STARD3NLO95772 234 aa25.22■■□□□ 1.63
SMAD1-211ENST00000512019 NARFQ9UHQ1 456 aa25.22■■□□□ 1.63
SMAD1-211ENST00000512019 TWISTNBQ3B726 338 aaPredicted RBP25.21■■□□□ 1.63
SMAD1-211ENST00000512019 C8orf58Q8NAV2 365 aa25.21■■□□□ 1.63
SMAD1-211ENST00000512019 CHMP4AQ9BY43 222 aa25.21■■□□□ 1.63
SMAD1-211ENST00000512019 BCL2L12Q9HB09 334 aa25.21■■□□□ 1.63
SMAD1-211ENST00000512019 NFIXQ14938 502 aa25.2■■□□□ 1.62
SMAD1-211ENST00000512019 DALRD3Q5D0E6 543 aaKnown RBP25.2■■□□□ 1.62
SMAD1-211ENST00000512019 PRAMEF22A3QJZ6 481 aa25.19■■□□□ 1.62
SMAD1-211ENST00000512019 CANXP27824 592 aaKnown RBP25.19■■□□□ 1.62
SMAD1-211ENST00000512019 C9orf131Q5VYM1 1079 aa25.19■■□□□ 1.62
SMAD1-211ENST00000512019 NMRK2Q9NPI5 230 aa25.19■■□□□ 1.62
SMAD1-211ENST00000512019 ELL2O00472 640 aaPredicted RBP25.18■■□□□ 1.62
SMAD1-211ENST00000512019 TSPYL6Q8N831 410 aa25.18■■□□□ 1.62
SMAD1-211ENST00000512019 CCDC88AQ3V6T2 1871 aa25.17■■□□□ 1.62
SMAD1-211ENST00000512019 CT47B1P0C2W7 299 aaPredicted RBP25.17■■□□□ 1.62
SMAD1-211ENST00000512019 USP16Q9Y5T5 823 aa25.17■■□□□ 1.62
SMAD1-211ENST00000512019 ANKRD31Q8N7Z5 1873 aa25.17■■□□□ 1.62
SMAD1-211ENST00000512019 SCN7AQ01118 1682 aa25.17■■□□□ 1.62
SMAD1-211ENST00000512019 HDGFL1Q5TGJ6 251 aa25.16■■□□□ 1.62
SMAD1-211ENST00000512019 EIF2S2P20042 333 aaKnown RBP25.15■■□□□ 1.62
SMAD1-211ENST00000512019 ERBB4Q15303 1308 aa25.14■■□□□ 1.62
SMAD1-211ENST00000512019 SERPINB2P05120 415 aa25.14■■□□□ 1.62
SMAD1-211ENST00000512019 CARMIL3Q8ND23 1372 aa25.14■■□□□ 1.61
SMAD1-211ENST00000512019 VAMP4O75379 141 aa25.13■■□□□ 1.61
SMAD1-211ENST00000512019 CCDC30Q5VVM6 783 aa25.13■■□□□ 1.61
SMAD1-211ENST00000512019 ZNF428Q96B54 188 aa25.13■■□□□ 1.61
SMAD1-211ENST00000512019 RNF181Q9P0P0 153 aa25.13■■□□□ 1.61
SMAD1-211ENST00000512019 EIF5P55010 431 aaKnown RBP25.12■■□□□ 1.61
SMAD1-211ENST00000512019 TOMM70O94826 608 aa25.11■■□□□ 1.61
SMAD1-211ENST00000512019 BICDL1Q6ZP65 573 aa25.11■■□□□ 1.61
SMAD1-211ENST00000512019 NECTIN2Q92692 538 aa25.11■■□□□ 1.61
SMAD1-211ENST00000512019 COL11A2P13942 1736 aaPredicted RBP25.1■■□□□ 1.61
SMAD1-211ENST00000512019 A1BGP04217 495 aa25.1■■□□□ 1.61
SMAD1-211ENST00000512019 RASSF7Q02833 373 aa25.1■■□□□ 1.61
SMAD1-211ENST00000512019 STK31Q9BXU1 1019 aa25.1■■□□□ 1.61
SMAD1-211ENST00000512019 TNRC6CQ9HCJ0 1690 aaKnown RBP25.1■■□□□ 1.61
SMAD1-211ENST00000512019 BCORQ6W2J9 1755 aa25.09■■□□□ 1.61
SMAD1-211ENST00000512019 DBF4Q9UBU7 674 aaPredicted RBP25.09■■□□□ 1.61
SMAD1-211ENST00000512019 CACNA1SQ13698 1873 aa25.09■■□□□ 1.61
SMAD1-211ENST00000512019 TBC1D9BQ66K14 1250 aa25.08■■□□□ 1.61
SMAD1-211ENST00000512019 CHPF2Q9P2E5 772 aa25.08■■□□□ 1.61
SMAD1-211ENST00000512019 ZNF330Q9Y3S2 320 aaPredicted RBP25.08■■□□□ 1.61
SMAD1-211ENST00000512019 TIAM2Q8IVF5 1701 aa25.08■■□□□ 1.61
SMAD1-211ENST00000512019 WDR90Q96KV7 1748 aa25.08■■□□□ 1.61
SMAD1-211ENST00000512019 C2CD5Q86YS7 1000 aa25.07■■□□□ 1.6
SMAD1-211ENST00000512019 DDX21Q9NR30 783 aaKnown RBP eCLIP25.07■■□□□ 1.6
SMAD1-211ENST00000512019 TBC1D2BQ9UPU7 963 aa25.07■■□□□ 1.6
SMAD1-211ENST00000512019 A0A087WZG4 1122 aa25.06■■□□□ 1.6
SMAD1-211ENST00000512019 IL6STP40189 918 aaPredicted RBP25.06■■□□□ 1.6
SMAD1-211ENST00000512019 PRELPP51888 382 aa25.06■■□□□ 1.6
SMAD1-211ENST00000512019 NPM2Q86SE8 214 aaKnown RBP25.06■■□□□ 1.6
SMAD1-211ENST00000512019 NBPF26B4DH59 902 aa25.05■■□□□ 1.6
SMAD1-211ENST00000512019 NBPF10Q6P3W6 841 aaKnown RBP25.05■■□□□ 1.6
SMAD1-211ENST00000512019 NBPF15Q8N660 670 aa25.05■■□□□ 1.6
SMAD1-211ENST00000512019 MYL6BP14649 208 aa25.04■■□□□ 1.6
SMAD1-211ENST00000512019 PIP4K2AP48426 406 aaPredicted RBP25.04■■□□□ 1.6
SMAD1-211ENST00000512019 ALDH1L2Q3SY69 923 aa25.04■■□□□ 1.6
SMAD1-211ENST00000512019 CCDC24Q8N4L8 307 aa25.04■■□□□ 1.6
SMAD1-211ENST00000512019 HYPKQ9NX55 129 aa25.04■■□□□ 1.6
SMAD1-211ENST00000512019 APLP1P51693 650 aa25.03■■□□□ 1.6
SMAD1-211ENST00000512019 PDIA6Q15084 440 aa25.03■■□□□ 1.6
SMAD1-211ENST00000512019 TTLL6Q8N841 843 aa25.03■■□□□ 1.6
SMAD1-211ENST00000512019 RRAGCQ9HB90 399 aa25.03■■□□□ 1.6
SMAD1-211ENST00000512019 PROSER3Q2NL68 480 aa25.02■■□□□ 1.6
SMAD1-211ENST00000512019 RBM46Q8TBY0 533 aaKnown RBP25.02■■□□□ 1.6
SMAD1-211ENST00000512019 KDM2BQ8NHM5 1336 aa25.02■■□□□ 1.6
SMAD1-211ENST00000512019 FER1L6Q2WGJ9 1857 aa25.02■■□□□ 1.6
SMAD1-211ENST00000512019 H0YIN7 160 aa25.01■■□□□ 1.59
SMAD1-211ENST00000512019 TCERG1O14776 1098 aaKnown RBP25.01■■□□□ 1.59
SMAD1-211ENST00000512019 SLC4A2P04920 1241 aa25.01■■□□□ 1.59
SMAD1-211ENST00000512019 SMC4Q9NTJ3 1288 aa25.01■■□□□ 1.59
SMAD1-211ENST00000512019 CACNA1FO60840 1977 aa25.01■■□□□ 1.59
SMAD1-211ENST00000512019 DICER1Q9UPY3 1922 aaKnown RBP25■■□□□ 1.59
SMAD1-211ENST00000512019 ANXA1P04083 346 aa25■■□□□ 1.59
SMAD1-211ENST00000512019 RARSP54136 660 aaKnown RBP25■■□□□ 1.59
SMAD1-211ENST00000512019 PRR5LQ6MZQ0 368 aa25■■□□□ 1.59
SMAD1-211ENST00000512019 C16orf71Q8IYS4 520 aaPredicted RBP25■■□□□ 1.59
SMAD1-211ENST00000512019 SSH1Q8WYL5 1049 aa25■■□□□ 1.59
SMAD1-211ENST00000512019 CAMTA2O94983 1202 aa24.99■■□□□ 1.59
SMAD1-211ENST00000512019 LRP10Q7Z4F1 713 aa24.99■■□□□ 1.59
SMAD1-211ENST00000512019 NFKBIEO00221 500 aa24.98■■□□□ 1.59
SMAD1-211ENST00000512019 LMNB1P20700 586 aa24.98■■□□□ 1.59
SMAD1-211ENST00000512019 DNAJC5GQ8N7S2 189 aa24.98■■□□□ 1.59
SMAD1-211ENST00000512019 SLX4Q8IY92 1834 aa24.98■■□□□ 1.59
SMAD1-211ENST00000512019 ARFGEF2Q9Y6D5 1785 aa24.98■■□□□ 1.59
SMAD1-211ENST00000512019 HTRA3P83110 453 aa24.97■■□□□ 1.59
SMAD1-211ENST00000512019 IFFO2Q5TF58 517 aa24.97■■□□□ 1.59
SMAD1-211ENST00000512019 ZNF622Q969S3 477 aaKnown RBP eCLIP24.97■■□□□ 1.59
SMAD1-211ENST00000512019 BCL2L13Q9BXK5 485 aa24.97■■□□□ 1.59
SMAD1-211ENST00000512019 KIF6Q6ZMV9 814 aa24.96■■□□□ 1.59
SMAD1-211ENST00000512019 DZIP3Q86Y13 1208 aaKnown RBP24.96■■□□□ 1.59
SMAD1-211ENST00000512019 MRPL50Q8N5N7 158 aaKnown RBP24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms