RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 HMGB2P26583 209 aaKnown RBP2.3□□□□□ -2.04
TRAPPC13-211ENST00000512009 RRP1P56182 461 aaKnown RBP2.3□□□□□ -2.04
TRAPPC13-211ENST00000512009 DPY19L2P1Q6NXN4 242 aa2.3□□□□□ -2.04
TRAPPC13-211ENST00000512009 RBM43Q6ZSC3 357 aaKnown RBP2.3□□□□□ -2.04
TRAPPC13-211ENST00000512009 NLRC5Q86WI3 1866 aa2.3□□□□□ -2.04
TRAPPC13-211ENST00000512009 DDX10Q13206 875 aaKnown RBP2.3□□□□□ -2.04
TRAPPC13-211ENST00000512009 PKP1Q13835 747 aa2.3□□□□□ -2.04
TRAPPC13-211ENST00000512009 MYH10P35580 1976 aa2.3□□□□□ -2.04
TRAPPC13-211ENST00000512009 CUL9Q8IWT3 2517 aa2.3□□□□□ -2.04
TRAPPC13-211ENST00000512009 PPP2R1AP30153 589 aa2.3□□□□□ -2.04
TRAPPC13-211ENST00000512009 APTXQ7Z2E3 356 aaKnown RBP2.3□□□□□ -2.04
TRAPPC13-211ENST00000512009 UBE2Q2Q8WVN8 375 aa2.3□□□□□ -2.04
TRAPPC13-211ENST00000512009 ADAMTS8Q9UP79 889 aa2.3□□□□□ -2.04
TRAPPC13-211ENST00000512009 FBLN2P98095 1184 aa2.29□□□□□ -2.04
TRAPPC13-211ENST00000512009 FMR1Q06787 632 aaKnown RBP eCLIP2.29□□□□□ -2.04
TRAPPC13-211ENST00000512009 SALL1Q9NSC2 1324 aa2.29□□□□□ -2.04
TRAPPC13-211ENST00000512009 GTF2F1P35269 517 aaKnown RBP eCLIP2.29□□□□□ -2.04
TRAPPC13-211ENST00000512009 MCCD1P59942 119 aaPredicted RBP2.29□□□□□ -2.04
TRAPPC13-211ENST00000512009 EXOC6Q8TAG9 804 aa2.29□□□□□ -2.04
TRAPPC13-211ENST00000512009 COL19A1Q14993 1142 aa2.29□□□□□ -2.04
TRAPPC13-211ENST00000512009 USP26Q9BXU7 913 aa2.29□□□□□ -2.04
TRAPPC13-211ENST00000512009 AMOTL2Q9Y2J4 779 aa2.29□□□□□ -2.04
TRAPPC13-211ENST00000512009 TAF6LQ9Y6J9 622 aa2.29□□□□□ -2.04
TRAPPC13-211ENST00000512009 ANKRD36A6QL64 1941 aa2.29□□□□□ -2.04
TRAPPC13-211ENST00000512009 ADRA2BP18089 450 aa2.29□□□□□ -2.04
TRAPPC13-211ENST00000512009 HNRNPUL2Q1KMD3 747 aaKnown RBP2.29□□□□□ -2.04
TRAPPC13-211ENST00000512009 PPP1R9BQ96SB3 815 aa2.29□□□□□ -2.04
TRAPPC13-211ENST00000512009 NIPBLQ6KC79 2804 aaeCLIP2.29□□□□□ -2.04
TRAPPC13-211ENST00000512009 NKX3-2P78367 333 aa2.29□□□□□ -2.04
TRAPPC13-211ENST00000512009 COL27A1Q8IZC6 1860 aaPredicted RBP2.29□□□□□ -2.04
TRAPPC13-211ENST00000512009 SHROOM3Q8TF72 1996 aa2.29□□□□□ -2.04
TRAPPC13-211ENST00000512009 JARID2Q92833 1246 aaPredicted RBP2.29□□□□□ -2.04
TRAPPC13-211ENST00000512009 CHAMP1Q96JM3 812 aa2.29□□□□□ -2.04
TRAPPC13-211ENST00000512009 MYBBP1AQ9BQG0 1328 aaKnown RBP2.29□□□□□ -2.04
TRAPPC13-211ENST00000512009 VPS33BQ9H267 617 aa2.29□□□□□ -2.04
TRAPPC13-211ENST00000512009 MTCL1Q9Y4B5 1905 aaKnown RBP2.29□□□□□ -2.04
TRAPPC13-211ENST00000512009 PATJQ8NI35 1801 aa2.28□□□□□ -2.04
TRAPPC13-211ENST00000512009 USP42Q9H9J4 1324 aaKnown RBP2.28□□□□□ -2.04
TRAPPC13-211ENST00000512009 VGFO15240 615 aaPredicted RBP2.28□□□□□ -2.04
TRAPPC13-211ENST00000512009 SLC27A3Q5K4L6 730 aa2.28□□□□□ -2.04
TRAPPC13-211ENST00000512009 BCL11BQ9C0K0 894 aaPredicted RBP2.28□□□□□ -2.04
TRAPPC13-211ENST00000512009 PDE4DIPQ5VU43 2346 aa2.28□□□□□ -2.04
TRAPPC13-211ENST00000512009 ITPR1Q14643 2758 aa2.28□□□□□ -2.04
TRAPPC13-211ENST00000512009 XRCC6P12956 609 aaKnown RBP eCLIP2.28□□□□□ -2.04
TRAPPC13-211ENST00000512009 MMP14P50281 582 aa2.28□□□□□ -2.04
TRAPPC13-211ENST00000512009 ZBED3Q96IU2 234 aaPredicted RBP2.28□□□□□ -2.04
TRAPPC13-211ENST00000512009 PANK2Q9BZ23 570 aa2.28□□□□□ -2.04
TRAPPC13-211ENST00000512009 UNC79Q9P2D8 2635 aa2.28□□□□□ -2.04
TRAPPC13-211ENST00000512009 POLR2AP24928 1970 aaKnown RBP2.28□□□□□ -2.04
TRAPPC13-211ENST00000512009 RGS20O76081 388 aa2.28□□□□□ -2.04
TRAPPC13-211ENST00000512009 CASP7P55210 303 aa2.28□□□□□ -2.04
TRAPPC13-211ENST00000512009 CD2APQ9Y5K6 639 aa2.28□□□□□ -2.04
TRAPPC13-211ENST00000512009 HRNRQ86YZ3 2850 aaPredicted RBP2.28□□□□□ -2.04
TRAPPC13-211ENST00000512009 FLT4P35916 1363 aa2.28□□□□□ -2.04
TRAPPC13-211ENST00000512009 CHMLP26374 656 aa2.28□□□□□ -2.04
TRAPPC13-211ENST00000512009 ALG13Q9NP73 1137 aaKnown RBP2.28□□□□□ -2.04
TRAPPC13-211ENST00000512009 PRDM10Q9NQV6 1147 aa2.28□□□□□ -2.04
TRAPPC13-211ENST00000512009 CFAP46Q8IYW2 2715 aa2.28□□□□□ -2.05
TRAPPC13-211ENST00000512009 NEFMP07197 916 aa2.27□□□□□ -2.05
TRAPPC13-211ENST00000512009 RSPH6AQ9H0K4 717 aa2.27□□□□□ -2.05
TRAPPC13-211ENST00000512009 EPHA10Q5JZY3 1008 aa2.27□□□□□ -2.05
TRAPPC13-211ENST00000512009 TXNDC2Q86VQ3 553 aa2.27□□□□□ -2.05
TRAPPC13-211ENST00000512009 TMEM139Q8IV31 216 aa2.27□□□□□ -2.05
TRAPPC13-211ENST00000512009 TTC14Q96N46 770 aa2.27□□□□□ -2.05
TRAPPC13-211ENST00000512009 RNF39Q9H2S5 420 aa2.27□□□□□ -2.05
TRAPPC13-211ENST00000512009 DOCK1Q14185 1865 aa2.27□□□□□ -2.05
TRAPPC13-211ENST00000512009 ZNF106Q9H2Y7 1883 aaKnown RBP2.27□□□□□ -2.05
TRAPPC13-211ENST00000512009 KIF3BO15066 747 aa2.27□□□□□ -2.05
TRAPPC13-211ENST00000512009 ZBTB7BO15156 539 aaPredicted RBP2.27□□□□□ -2.05
TRAPPC13-211ENST00000512009 RARSP54136 660 aaKnown RBP2.27□□□□□ -2.05
TRAPPC13-211ENST00000512009 CRY2Q49AN0 593 aa2.27□□□□□ -2.05
TRAPPC13-211ENST00000512009 TICRRQ7Z2Z1 1910 aa2.27□□□□□ -2.05
TRAPPC13-211ENST00000512009 UBR5O95071 2799 aaPredicted RBP2.27□□□□□ -2.05
TRAPPC13-211ENST00000512009 PTPRDP23468 1912 aa2.27□□□□□ -2.05
TRAPPC13-211ENST00000512009 FAM83GA6ND36 823 aa2.27□□□□□ -2.05
TRAPPC13-211ENST00000512009 PDIA6Q15084 440 aa2.27□□□□□ -2.05
TRAPPC13-211ENST00000512009 WWC1Q8IX03 1113 aa2.27□□□□□ -2.05
TRAPPC13-211ENST00000512009 VSIG10Q8N0Z9 540 aa2.27□□□□□ -2.05
TRAPPC13-211ENST00000512009 OSBPL3Q9H4L5 887 aa2.27□□□□□ -2.05
TRAPPC13-211ENST00000512009 UTYO14607 1347 aa2.26□□□□□ -2.05
TRAPPC13-211ENST00000512009 SCN8AQ9UQD0 1980 aa2.26□□□□□ -2.05
TRAPPC13-211ENST00000512009 UBAP1LF5GYI3 381 aa2.26□□□□□ -2.05
TRAPPC13-211ENST00000512009 NEFLP07196 543 aa2.26□□□□□ -2.05
TRAPPC13-211ENST00000512009 TM4SF1P30408 202 aa2.26□□□□□ -2.05
TRAPPC13-211ENST00000512009 CHRDQ9H2X0 955 aa2.26□□□□□ -2.05
TRAPPC13-211ENST00000512009 KCND1Q9NSA2 647 aa2.26□□□□□ -2.05
TRAPPC13-211ENST00000512009 COL7A1Q02388 2944 aa2.26□□□□□ -2.05
TRAPPC13-211ENST00000512009 EML5Q05BV3 1969 aa2.26□□□□□ -2.05
TRAPPC13-211ENST00000512009 RTFDC1Q9BY42 306 aaPredicted RBP2.26□□□□□ -2.05
TRAPPC13-211ENST00000512009 IKBKBO14920 756 aa2.26□□□□□ -2.05
TRAPPC13-211ENST00000512009 CDK11BP21127 795 aaKnown RBP2.26□□□□□ -2.05
TRAPPC13-211ENST00000512009 HOXA10P31260 410 aaPredicted RBP2.26□□□□□ -2.05
TRAPPC13-211ENST00000512009 HDGFP51858 240 aaKnown RBP2.26□□□□□ -2.05
TRAPPC13-211ENST00000512009 TRIM52Q96A61 297 aa2.26□□□□□ -2.05
TRAPPC13-211ENST00000512009 DCAF5Q96JK2 942 aa2.26□□□□□ -2.05
TRAPPC13-211ENST00000512009 PHACTR3Q96KR7 559 aa2.26□□□□□ -2.05
TRAPPC13-211ENST00000512009 PIEZO1Q92508 2521 aa2.26□□□□□ -2.05
TRAPPC13-211ENST00000512009 OTOGQ6ZRI0 2925 aa2.26□□□□□ -2.05
TRAPPC13-211ENST00000512009 TULP2O00295 520 aa2.26□□□□□ -2.05
TRAPPC13-211ENST00000512009 FYB1O15117 783 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms